GEISHA - A Chicken Embryo Gene Expression Database
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COL1A1
collagen type I alpha 1 chain

Gene
Official SymbolCOL1A1
Official Full Namecollagen type I alpha 1 chain
CGNC ID49364
also known ascollagen alpha-1(I) chain|alpha-1 collagen (I)|collagen alpha-1 chain|collagen, type I, alpha 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_423116
PolypeptideXP_423116
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.43371
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Functionextracellular matrix structural constituent, metal ion binding
Biological Process
Cellular Componentcollagen
Links to other databases
Entrez Gene395532
Ensembl Gene
KEGGgga:395532
GEISHA IdCOL1.LeGuen.2009Data SourcePublication
Complete cDNA Template Probeshow
ATGAGCGACGGCTTCCAGTTTGAGTACGGCGGTGAGGGCTCCAACCCGGCTGATGTCGCCATCCAACTGACCTTCCTGC
GCCTGATGTCCACCGAGGCCACCCAGAACGTCACCTACCACTGCAAGAACAGCGTCGCCTACATGGACCACGACACCGG
CAACCTGAAGAAGGCTCTGCTGCTCCAGGGAGCCAACGAGATCGAGATCAGGGCCGAAGGAAACAGCCGCTTCACCTAT
GGGGTCACCGAGGATGGCTGCACG
CitationLe Guen L, Notarnicola C, de Santa Barbara P. Intermuscular tendons are essential for the development of vertebrate stomach. Development. 2009 Mar;136(5):791-801.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #XM_423116).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-35
stage 35
stage 35
stage 35
Gizzard
Splanchnic Mesoderm
Stomach
tendon domains
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.43371

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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