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HOXB3 Gene Summary Expression Transcript Levels Other Species Expression JBrowse Gene Official Symbol HOXB3 Official Full Name homeobox B3 CGNC ID 49352 also known as 2.7, CHOX, HOXB-3, homeobox protein Hox-B3|chox-2.7|homeo box B3|homeobox protein Hox-2.7 gene type protein-coding
Genomic Map Sequence Information Gene Expression Orthology Gene Ontology Links to other databases
Entry 1 GEISHA Id HOXB3.UApcr Data Source GEISHA ISH Analysis Forward cDNA Template Primer AATGGGTTTGGCTACGAGGGTC Reverse cDNA Template Primer AATTAACCCTCACTAAAGTGGGGCTTATTGAGGGAAGGTG cDNA Template Length 743 Complete cDNA Template Probe show GAATGGGAGCTGTATGAGGCCGAGTTTGCCCCAGGAGCACCATCCGCCTCCGACTGTCTCACCACCCCCAAACCCCACC
Entry 2 GEISHA Id HOXB3.Alev.2010 Data Source Publication Complete cDNA Template Probe show ATGCAGAAGACAACGTACTACGAAAGCTCCACGCTCTTTGGGGGCTATTCCTATGGGAGCACCAATGGGTTTGGCTACG
Citation Alev C, Wu Y, Kasukawa T, Jakt LM, Ueda HR, Sheng G. Transcriptomic landscape of the primitive streak. Development. 2010 Sep 1;137(17):2863-74. Epub 2010 Jul 28. Copyright Published by The Company of Biologists 2010. This material is protected by a copyright retained by the authors. Permission granted by Dr. G Sheng. Comments FORWARD PRIMER TGGAGATGCAGAAGACAACG
REVERSE PRIMER TCGAGTTTTGCCTCGATTCT
Entry 3 GEISHA Id HOXB3.Richardson.2011 Data Source Publication Complete cDNA Template Probe show ATGCAGAAGACAACGTACTACGAAAGCTCCACGCTCTTTGGGGGCTATTCCTATGGGAGCACCAATGGGTTTGGCTACG
Citation Richardson J, Shono T, Okabe M and Graham A. The presence of an embryonic opercular flap in amniotes. PLoS One. 2012; 7(9): e44903. Published online 2012 September 11. Copyright PLoS One. 2012; 7(9): e44903. Published online 2012 September 11. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204743.1).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 25-26 stage 26
stage 26
Pharynx
Entry 4 GEISHA Id Hoxb‐3.Gaunt.1996 Data Source Publication Complete cDNA Template Probe show GAATTCCACTTCAACCGCTACCTGTGCCGGCCCCGGCGCGTGGAGATGGCCAACCTGCTGAACCTCAGCGAGAGGCAGA
Citation Gaunt SJ, Strachan L. Temporal colinearity in expression of anterior Hox genes in developing chick embryos. Dev Dyn. 1996 Nov;207(3):270-80. Copyright Copyright © 1996 Wiley‐Liss, Inc. Comments The complete cDNA template sequence was obtained from the information from the publication as described in Gaunt et al. 1996.
Entry 5 GEISHA Id Hoxb3.Bel-Vialar.2002 Data Source GEISHA ISH Analysis Complete cDNA Template Probe show ATGCAGAAGACAACGTACTACGAAAGCTCCACGCTCTTTGGGGGCTATTCCTATGGGAGCACCAATGGGTTTGGCTACG
Citation Sophie Bel-Vialar, Nobue Itasaki, Robb Krumlauf. Initiating Hox gene expression: in the early chick neural tube differential sensitivity to FGF and RA signaling subdivides the HoxB genes in two distinct groups. Development 2002 Nov;129(22):5103-15. Copyright Copyright © The Company of Biologists Limited 2002. Comments As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (accession number NM_204743.2).
Stage Image (click image to view full size) Location (click to highlight) Comments (click to highlight) 13-15 stage 15
Somites Spinal Cord
Data from NCBI Unigene EST ProfileGga.2648
Mouse Frog Fruit Fly Zebra Finch Zebrafish
