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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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KRT5
keratin 5

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	KRT5
Official Full Name	keratin 5
CGNC ID	49888
also known as	keratin, type II cytoskeletal 5\|keratin 5 (epidermolysis bullosa simplex, Dowling-Meara/Kobner/Weber-Cockayne types)\|type II alpha-keratin IIA
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	NM_001001195
Polypeptide	NP_001001195

Gene Expression

In Situ Hybridization

GEISHA

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3852	ENSG00000186081	MIM:179850	MIM:148040
Mouse	110308	ENSMUSG00000061527	All phenotypic alleles (3):Targeted, knock-out(3)	MGI:96702
Xenopus	100489468, 373584			920458
Zebrafish	797351	ENSDARG00000058371	ZDB-GENE-991110-23	ZFIN:ZDB-GENE-991110-23

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	407779
Ensembl Gene
KEGG	gga:407779

Entry 1

GEISHA Id	KRT5.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	AGCATCATCGCAGAGGTGAAGG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGTGGTGGTGGTCTTGGAAACG	cDNA Template Length	754
Forward cDNA Template Probe	show AANAACGCAGCNCCCCGTGCTGGANCTGACCCCTCGGCTGCTGCTGGAGCTGAAGTTGCTGCCTCCACCATAGCTGTAG CTTCCACTCCCACCTCCGAATCCTCCACCGCCGACGCTGCTGCTCATGGTGTAGCTGCCGCCGCCACCTCCCATGCCAA GACCACTGCCCATGCTGAGACCTCCACCCATGCAGAGACCTCCACCTGTACTGAGACCTCCGCCCATGCCGCCGCCGTA GCCCATCCCNCTGGAGCTGCTCACTACAGAGACACTCACGGCTCCAACACCCTCTCCGGCAAGCCTGCTCTCCTCGCCC TCCAGCAGCTTCCTGTAGGTTGCAATCTCGATGTCCAGGGCCAGCTTGACGTTCATCAGCTCCTGGTACTCGCGTAGTT GTCGGGCCAGGTCTGCCTTGGCTTTCTGCAGGGCATCCTCCAGCTCGGCCAGTTTGGATTTGGCATCTTTCAGGGCCAT CTCTCNACGCTCCTCTGCCTCAGCGATGGCTGCTTGGAGATTGGCACACTGTTTCTTCACGCTCTCAATCTCGTTGCGC AGCCGCTGCACCATCCGGTTGATCTCTGAGATCTCCATCTTGGTGTTCCTGAGGTCATCCCCATGGCGCCCGGCTGAGA CCTGCAGCTCTTCGTACTTGTTCTGGTACCAAGCCTCTGCCTCAGCCCGGCTGCGGTTGGCGATGTCCTCATACTGTGC CTTCACCTCTGGAAAGGATGCT

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Area Opaca
Endoderm
Epiblast

7-12

stage 7

stage 8

stage 9

stage 10

stage 11

Amnion
Anterior Intestinal Portal
Area Opaca
Ectoderm
Endoderm
Extraembryonic
extraembryonic ectoderm
extraembryonic endoderm

13-18

stage 16

stage 17

Amnion
Endoderm
Splanchnic Mesoderm

19-24

stage 22

stage 23

Allantois
Foregut
Hindgut
Midgut
Pharyngeal Arches and Clefts
Proepicardium
Somatic Mesoderm
Wing

25-26

stage 26

Allantois
Foregut
Hindgut
Pharyngeal Arches and Clefts
Sinus Venosus
Somatic Mesoderm

Entry 2

GEISHA Id	ALPHA2KERATIN.Jiang.2011	Data Source	Publication
Complete cDNA Template Probe	show CTCCGTTGCCCTCTGCTGCTTTCCTGCTGCTCAGCTTCTATCACCAGCTCTTTCCCCCGTTCCTGTTCTTTGCGTTTCC AACTGCACGAGCCATGAGCCGGATCTCGTACAGATCTTCCACCGGAGGGGGCATGAGGGGCTTTAGCTCAGGCTCTGCT ATCGTGGGAGGCAGCGGTGGTGGCACGCGGAGCAGCTTCAGCTCCGTCTCTGTCTCCAGAGTTGGAGGAGGAAGAGCTG GAGGTGGAGGAGGCTTTGGAGCTGGCGGTGGCTTCGGCAGCAGAAGTCTCTATAACCTGGGTGGAAGCAAGAGAATCTC CCTCGGAGGGCTGCGGAGCGGAGCCGGCGTCGGATACGGCTTTGGTGGAGGAGCCGGCTTTGGTCTGGGCTATGGTGGA GGAGCAGGAGCTGCTTTGGGCTTAGGAGGAGCTGGTGGCGGTGGTGGCTACGGGCTGGGTGGATTTGGGATGGGAGGTC CCGGATTTGGTGGTCGTGGTGGCCCCGGGTTCCCCGTTTGCCCACCCGGTGGCATCCATGAAGTGACCGTCAACCAAAG CCTGCTGGCACCCCTCAAGCTGGACATCGACCCTGAGATCCAGAAGGTGCGGACACAGGAGCGGGAGCAGATCAAGACC CTCAACAACAAATTTGCCTCCTTCATCGACAAGGTGCGGTTCCTGGAGCAGCAGAACAAAGTGCTGGAGACCAAATGGA GCCTCCTGCAAGAGCAGGGCCACACGGTCACCAGGAAGTCTCTGGAGCCCCTCTTCGAGACCTACATCAACAACCTGAG GCGGCAGCTGGACAGCCTGATGGGGGAGAGGGGACGGCTGGACTCGGAGCTGCGGAGCATGCAGGACATGGTGGAGGAC TTCAAGAACAAGTATGAGGATGAGATCAACCGGCGCACGGGCGCAGAGAACGAGTTCGTGGTGCTCAAGAAGGATGTGG ACGGTGCTTACATGAACAAGGTGGAGCTGCAGGCCAAAGCAGACGGGCTGGCAGATGAGATCAACTTCCTGAGGGCTCT CTATGAAGCGGAATTGTCTCAGATGCAGCAGCAAGTGTCTGACACCTCCGTGGTGCTGTCCATGGACAACAACCGCAGC CTGGACCTCAACAGCATCATCGCAGAGGTGAAGGCACAGTATGAGGACATCGCCAACCGCAGCCGGGCTGAGGCAGAGG CTTGGTACCAGAACAAGTACGAAGAGCTGCAGGTCTCAGCCGGGCGCCATGGGGATGACCTCAGGAACACCAAGATGGA GATCTCAGAGATCAACCGGATGGTGCAGCGGCTGCGCAACGAGATTGAGAGCGTGAAGAAACAGTGTGCCAACCTCCAA GCAGCCATCGCTGAGGCAGAGGAGCGTGGAGAGATGGCCCTGAAAGATGCCAAATCCAAACTGGCCGAGCTGGAGGATG CCCTGCAGAAAGCCAAGGCAGACCTGGCCCGACAACTACGCGAGTACCAGGAGCTGATGAACGTCAAGCTGGCCCTGGA CATCGAGATTGCAACCTACAGGAAGCTGCTGGAGGGCGAGGAGAGCAGGCTTGCCGGAGAGGGTGTTGGAGCCGTGAGT GTCTCTGTAGTGAGCAGCTCCAGCGGGATGGGCTACGGCGGCGGCATGGGCGGAGGTCTCAGTACAGGTGGAGGTCTCT GCATGGGTGGAGGTCTCAGCATGGGCAGTGGTCTTGGCATGGGAGGTGGCGGCGGCAGCTACACCATGAGCAGCAGCGT CGGCGGTGGAGGATTCGGAGGTGGGAGTGGAAGCTACAGCTATGGTGGAGGCAGCAACTTCAGCTCCAGCAGCAGCCGA GGGGTCAGCTCCAGCACAGGGGGCAGCGTGCGGATCGTTTCCAAGACCACCACCAGCAAAAAGACCATCAGATAAGGAT GGTTCCAGCCAACGGTGTGTTTCCTGCCTTCCAAAAGCAACGTGCTGTCTTACCAATCAGTGCTGTACATAGCT
Citation	Jiang TX, Tuan TL, Wu P, Widelitz RB, Chuong CM.. From Buds to Follicles: Matrix Metalloproteinases in Developmental Tissue Remodeling during Feather Morphogenesis. Differentiation. Volume 81, Issue 5, June 2011, Pages 307314
Copyright	Copyright © 2012 Elsevier B.V. All rights reserved.