Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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EZR
ezrin

Gene

Official Symbol	EZR
Official Full Name	ezrin
CGNC ID	10288
also known as	VIL2, ezrin\|villin 2 (ezrin), ezrin, ezrin
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204885
Polypeptide	NP_990216
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.40252

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	7430	ENSG00000092820		MIM:123900
Mouse	22350	ENSMUSG00000052397	All phenotypic alleles (9):Targeted, other(9)	MGI:98931
Xenopus	595017, 447216			484765
Zebrafish	561589, 403009	ENSDARG00000025091, ENSDARG00000020944	ZDB-GENE-050803-1, ZDB-GENE-050522-18	ZFIN:ZDB-GENE-050803-1, ZFIN:ZDB-GENE-050522-18

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395701
Ensembl Gene	ENSGALG00000013742
KEGG	gga:395701

Entry 1

GEISHA Id	EZR.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GGAAGCGTAAGGAGAGTGAGGTTG
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGTGTGTGTCAGGTGGGCATCAAG	cDNA Template Length	952
Forward cDNA Template Probe	show ACAAGAANAAAACAGNAGTGCACGNNGCCTGGCATCAGCACACACACNGGCTGGTTCGCAGNTTCCTGGACTTGTGACC TCCTCACCCTGNTTGGACATTACACCTGNTAACACAAAGACATATGGCACAAAATTCACCCCCAGCTGCTAAGTTTTAG ACCAAGGTGAATCCAGCACCTGTGCAGGACATGCCTCTACATGTCCTTTTTTGTTGATTTGTGTTGGTTACAGAGAGAT ACGAAANANGGCCNTTTGGCACTAANCNAAGGCATGAGCAAGTTGNCAGGANCNNAGGNAAGATCNATTTTTAACTATA CCNAATTTAATACACGGTATGNAAGAAAAGGGAGATGCAAACAAACACCTCTGGGTTTANAGAACATTTGTTAAATACC ATACANTGACCCCTCCTCAGGGTGAAAACAAAACCAAAACCACANCATTAAGATCTGCTTTTCCCACAGTCTTGCCTTC TTGTTGTAAGCACTCATTACATTGCCTCANACTCATCAATTCTCTGCTTGGTGTTGCCTTGNCGGATCTGCCGCACCGT CTTGTACTTGTCACGGCCCTGTCGCACGTTCTCTGAGTGNATGATATCATTTTGGGTCCTCTTATCTTCATCTCTGGCC TGCGCCAGCTCATCTGTCAGTGCCTTCANCTGCCTCTGTACACGCTCGTTCTTCTCTGCTTCAGTAATGCGTTTCTCCT CATTGCGGTCATTCCTGATCCCCTCANTGGANAACTCTGCGCTGTANNCAAANTACNCANACCCCTCATCATGCANGTT ATCNTGCACNTGNTANTTCACTGGCTCNTANATGGNTGGANNTG

Stage

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Location (click to highlight)

Comments (click to highlight)

1-3

stage 3

Area Opaca
Primitive Streak

Stage 3+ / 4-.

7-12

stage 9

Extraembryonic Mesoderm
Lateral Plate Mesoderm
Primitive Streak

13-18

stage 16

Eye
Forebrain
Heart
Hindgut
Intermediate Mesoderm
Midbrain
Midgut
Oral Pharynx
Pharyngeal Arches and Clefts
Tail

19-24

stage 19

stage 21

Ear/Otic Placode
Forebrain
Heart
Hindbrain
Hindgut
Mesonephros
Midbrain
Midgut
Nasal Placode/Nerve
Oral Pharynx
Pharyngeal Arches and Clefts

25-26

stage 25

stage 26

Allantois
Ear/Otic Placode
Eye
Forebrain
Heart
Hindgut
Mesonephros
Midbrain
Midgut
Nasal Placode/Nerve
Oral Pharynx
Spinal Ganglia and Nerves

Entry 2

GEISHA Id	Ezrin.Richter.2004	Data Source	Publication
Complete cDNA Template Probe	show CAGCGCTGAAAATGCCGAAACCGATCAACGTTCGGGTTGTTACTGTGGATGCAGAGCTGGAGTTTGCCATCCAGCCAAA CACTACAGGCAAACAGCTATTTGATCAGGTGGTTAAAACCATTGGTTTGCGAGAAGTGTGGTACTTCGGTCTGCAGTAT GTAGACAACAAAGGGTTCCAGACTTGGCTGAAGCTAGATAAAAAGGTTTCTGCTCAAGAAATCAGAAAGGAGAATCCCC TCCAGTTCAGGTTCCGTGCCAAGTTCTTCCCAGAGGATGTGGCTGAAGAGCTGATACAGGACATCACGCAGAAGCTCTT CTTCCTTCAGGTGAAGGAAGGGATCCTCAGTGATGAGATCTACTGTCCTCCTGAAACAGCAGTGCTTCTTGGCTCCTAT GCTGTGCAGGCCAAATTTGGAGATTACAACAAAGATGTGCACAAGCCTGGATACCTCAATTCAGAGCGTCTTATCCCCC AGAGGGTGATGGATCAGCATAAACTCTCCAGAGACCAGTGGGAGGAACGGATCCAGGTTTGGCATGCTGAGCACAGTGG TATGCTCAAAGAGAATGCCATGCTGGAATACCTGAAGATTGCTCAAGACCTTGAGATGTATGGAATCAACTACTTTGAA ATCAAGAATAAGAAAGGAACTGACCTCTGGCTGGGAGTTGATGCCTTAGGGCTCAACATCTATGAAAAAGATGATAAAC TGACTCCAAAGATTGGGTTCCCCTGGAGTGAAATCAGAAACATCTCTTTCAATGACAAAAAGTTTGTAATAAAGCCCAT CGACAAGAAGGCACCTGACTTTGTGTTTTATGCCCCTCGTCTGAGAATTAACAAGAGGATCCTGCAGCTCTGCATGGGC AACCACGAACTGTATATGCGGCGCAGGAAGCCTGACACCATTGAGGTGCAGCAGATGAAGGCCCAGGCCCGGGAAGAGA AGCACCAGAAGCAGCTGGAAAGGCAACAACTGGAAAATGAAAAGAAGAAGAGGGAGACAATTGAGAGGGA
Citation	Richter U, Wittler L, Kessel M (2004). Restricted expression domains of Ezrin in developing epithelia of the chick. Gene Expr Patterns. 2004 Mar;4(2):199-204.
Copyright	Copyright © 2003 Elsevier B.V. All rights reserved.
Comments	Digoxigenin (DIG-) labelled antisense RNA probes were transcribed in vitro from PCR products of a portion of chick Ezrin (nt 1-1018 of GI 4514719).