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HMGB1
high mobility group box 1| Gene | | Official Symbol | HMGB1 | | Official Full Name | high mobility group box 1 | | CGNC ID | 49444 | | also known as | HMG-1, HMG1, high mobility group protein B1|high mobility group 1 protein|high mobility group protein 1|high mobility group protein HMG1, high-mobility group box 1 | | gene type | protein-coding |
| | Genomic Map | | | Sequence Information | | | Gene Expression | | | Orthology | | | Gene Ontology | | Molecular Function | DNA binding, repressing transcription factor binding, more...sequence-specific DNA binding transcription factor activity | | Biological Process | base-excision repair, DNA ligation, inflammatory response to antigenic stimulus, more...negative regulation of apoptotic cell clearance, negative regulation of RNA polymerase II transcriptional preinitiation complex assembly, positive regulation of apoptotic process, positive regulation of cysteine-type endopeptidase activity involved in apoptotic process, positive regulation of DNA binding, positive regulation of transcription from RNA polymerase II promoter, V(D)J recombination | | Cellular Component | cell surface, condensed chromosome, extracellular space, transcriptional repressor complex |
| | Links to other databases | |
Entry 1| GEISHA Id | N01 | Data Source | GEISHA ISH Analysis | | Complete cDNA Template Probe | show GCTCACAGCCATTGCGGTGCATTGGGCTACACAGGGACCCAGGCAGCGCTGGGGCCGGGGCGAGCGGCCGGGCGGGCGT
CTCTGGGGCTGGGGGCCGAGCGAGGGCTGCGTGCCGACTCTGACGCGGAAAATCCTCAAAAATGGGCAAAGGTGATCCC
AAGAAGCCGAGAGGTAAAATGTCTTCATACGCCTTCTTTGTGCAAACCTGCCGGGAGGAGCACAAGAAGAAACATCCAG
ATGCTTCAGTGAACTTCTCAGAGTTCTCAAAAAAATGCTCAGAACGATGGAAGAGCTATGTCTTCTAAGGAGAAAGGGA
AGTTTGAAGATATGGCAAAGGCTGACAAGCTTCGGTATGAAAAAGAAATGAAAAACTATGTACCACCTAAGGGGGAAAC
AAAAAAGAAGTTCAAGGATCCAAATGCACCGAAGAGGCCTCCTTCGGCTTTTTTCTTGTTTTGCTCTGAGTTTCGTCCA
AAAATCAAAGGAGAACATCCCGGTCTGTCCATTGGGGACGTGGCAAAGAAACTGGGAGAGATGTGGAACAACACCGCAG
CAGATGATAAACAGCCTTACGAAAAGAAGGCTGCTAAGCTGAAGGAGAAGTATGAGAAGGATATTGCTGCATACCGGGC
CAAAGGGAAGGTTGATGCAGGCAAAAAAGTAGTTGCCAAGGCCGAGAAGAGCAAGAAGAAGAAGGAAGAAGAGGAAGAT
GAGGACGAAGACGAAGAGGATGAAGAGGACGAAGAAGAGGAAGAAGAGGAGGAGGAAGATGATGATGATGATGAATAAG
TCTCTTTTAGAGCAATTTCTTTCTTGTCTATAAAGCATTTAACCCCCCTGTACACAACTCACTCCTTTTAAAGAAAAAA
AAAATGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTCTTTTTTTGTATAGTTAACACACTACCG
AATGTGTCTTTAGATAGCCCTGTCCTTAGTGGTATTTCAATGGCCACTAACCTTGCCTGGTACAGTGTGGGGGTTGTAA
ATTGGCATGGGAGTTTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAGTTCTATTTGGGGATGTAGTTCATTTCT
CATCTTCAGTTGTCTCTGATGCATCATAAAAATAATTGTCGTTCTGTTAATTGAATACCACTCTGTAATTGCAAAAAGG
AAGAAAAGAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATAAAAAAAAAAA
AAAAAAA | | Comments | no specific expression detected, widespread |
no images Entry 2| GEISHA Id | pgf2c.pk001.e16 | Data Source | GEISHA ISH Analysis | | Forward cDNA Template Probe | show CTCCAAGGATATTGCTGCATACCGGGCCAAAGGGAAGGTTGATGCAGGCAAAAAAGTAGTTGCCAAGGCCGAGAAGAGC
AAGAAGAAGAAGGAAGAAGAGGAAGATGAGGACGAAGACGAAGAGGATGAAGAGGACGAAGAAGAGGAAGAAGAGGAGG
AGGAAGATGATGATGATGATGAATAAGTCTCTTTTAGAGCAATTTCTTTCTTGTCTATAAAGCATTTAACCCCCCTGTA
CACAACTCACTCCTTTTAAAGAAAAAAAAAATGAAATGTAAGGCTGTGTAAGATTTGTTTTTAAACTGTACAGTGTCTC
TTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTGTCCTTAGTGGTATTTCAATGGCCACTAACC
TTGCCTGGTACAGTGTGGGGGTTGTAAATTGGCATGGGAGTTTTAAAGCAGGTTCTTGTTGGTGCACAGCACAAATTAG
TTCTATTTGGGGATGTAGTTCATTTCTCATCTTCAGTTGTCTCTGATGCATCATAAAAATAATTGTCGTTCTGTTAATT
GAATACCACTCTGTAATTGCAAAAAGGAAGAAAAGAAAGTTGCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAA
ATACAATTTTTTTTATTAGTATTGTTGTCCTTTTAATAGGTGCCCTGGAAAATCATACTTTTTCTTTTCTCTCTCTCTC
TTTTTTTTTTTTTTTTTGAGGGGAACTCATCTTTTGCTTTATTGAATGCCCGTTTGGGATCACGTGAATATTACAGTTT
TCATCTTTCATATATCCAGCTGATAAACACAGCTTTGATCTACATACCCTGCATA | | Comments | no specific expression detected stages 3-23. |
| Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | | 13-16 |
 | | stage 16 |
| Ubiquitous
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Entry 3| GEISHA Id | ChEST26m2 | Data Source | GEISHA ISH Analysis | | Forward cDNA Template Probe | show AAGATTTGTTTTTAAACTGTACAGTGTCTCTTTTTTTGTATAGTTAACACACTACCGAATGTGTCTTTAGATAGCCCTG
TCCTTAGTGGTATTTCAATGGCCACTAACCTTGCCTGGTACAGTGTGGGGGTTGTAAATTGGCATGGGAGTTTTAAAGC
AGGTTCTTGTTGGTGCACAGCACAAATTAGTTCTATTTGGGGATGTAGTTCATTTCTCATCTTCAGTTGTCTCTGATGC
ATCATAAAAATAATTGTCGTTCTGTTAATTGAATACCACTCTGTAATTGCAAAAAGGAAGAAAAGAAAGTTGCAGCTGT
TTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAGTATTGTTGTCCTTTTAATAGGTGCCCTGGA
AAATCATACTTTTTCTTTTCTCTCTCTCTCTTTTTTTTTTTTTTTTGAGGGGAACTCATCTTTTGCTTTATTGAATGCC
CGTTTGGGATCACGTGAATATTACAGTTTTCATCTTTCATATATCCAGCTGATAAACACAGCTTTGATCTACATACCCT
GCATATTCATGATAGGGTAAGAAGAGAAATCTATAGGCGTGTGATGAAAGAATATTCTTCCGTAACTGGAAACAAAAGA
AACCAATCTCATCAAAGCGATACTCGTTCAGAAGTTTGTGAAGTGTAATATTCTGTTGCATGAATTTACCAGTCTTGGA
GAGTTGAGAAGTATAGAGTTCAATATAACAGAAATGAAATACTTCTGGGGGGAGGGAGCGGATGTTGCGTTTTGTCCTG
GAAGGACCCATAGG | | Comments | widespread expression |
| | Data from NCBI Unigene EST Profile
Unigene ID: Gga.4638 |
MouseFrogFruit FlyZebra FinchZebrafish |
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