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A chicken embryo gene expression database

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	GEISHA ID
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PTCH1
patched 1

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	PTCH1
Official Full Name	patched 1
CGNC ID	49488
also known as	PTC, PTC1, PTCH, protein patched homolog 1\|patched homolog 1\|patched protein\|patched-like protein, patched homolog 1 (PTC1) , PTC
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204960
Polypeptide	NP_990291
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.474

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	35851			FBgn0003892
Human	5727	ENSG00000185920	MIM:605462	MIM:601309
Mouse	19206	ENSMUSG00000021466	All phenotypic alleles (14):Spontaneous(1) Targeted, knock-out(5) Targeted, other(8)	MGI:105373
Xenopus	100492061, 398215, 100492958, 100191013, 397836			488221, 1033867
Zebrafish	30189	ENSDARG00000016404	ZDB-GENE-980526-196	ZFIN:ZDB-GENE-980526-196

Gene Ontology

Molecular Function	hedgehog receptor activity
Biological Process	smoothened signaling pathway
Cellular Component	integral component of plasma membrane

Links to other databases

Entrez Gene	395806
Ensembl Gene
KEGG	gga:395806

Entry 1

GEISHA Id	PTCH1.UAlinear	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Comments	Insufficient information provided to verify exact sequence used to synthesize probe. Sequence above was obtained from NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

Unlabeled

7-12

stage 8

stage 9

stage 10

stage 11

stage 12

Endoderm
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Somites

19-24

stage 19

stage 21

stage 24

Allantois
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Limb Buds
Neural Plate/Tube
Oral Pharynx
Pharyngeal Arches and Clefts
Spinal Cord
Tail
Wing Mesenchyme

Entry 2

GEISHA Id	PTC1.Aglyamova.2007	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Aglyamova GV, Agarwala S. Gene expression analysis of the hedgehog signaling cascade in the chick midbrain and spinal cord. Dev Dyn. 2007 May;236(5):1363-73
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 10

Isthmus/MHB
Midbrain
Neural Plate/Tube
Notochord
Spinal Cord

Floor Plate

13-18

stage 13

stage 16

Isthmus/MHB
Midbrain
Neural Plate/Tube

25-26

stage 26

Isthmus/MHB
Midbrain
Neural Plate/Tube

Entry 3

GEISHA Id	PTC1.Pearse.2001	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Pearse RV, Vogan KJ, Tabin CJ. Ptc1 and Ptc2 transcripts provide distinct readouts of Hedgehog signaling activity during chick embryogenesis. Dev Biol. 2001 Nov 1;239(1):15-29.
Copyright	Reprinted with permission from Elsevier. Copyright © 2001 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

Early Mesoderm
Head Process
Hensen's Node

FIG. 3. Comparison of Shh, Ptc1, and Ptc2 expression at stage HH5+.

19-24

stage 19

stage 20

stage 21

stage 22

stage 23

stage 24

Gut
Mesoderm
Neural Plate/Tube
Wing Mesenchyme

25-30

stage 25

stage 30

Wing Mesenchyme

FIG. 2. Developmental overview of chick Ptc2 expression, showing whole-mount and section in situ hybridizations with probes directed against Ptc2, Ptc1, and Shh.
FIG. 4. Comparison of Shh, Ptc1, and Ptc2 expression during early limb bud development.

Entry 4

GEISHA Id	PTC1.Agarwala.2005	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Agarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
Copyright	Copyright © 2005 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 22

Neural Plate/Tube
Spinal Cord

25-26

stage 26

Midbrain

Entry 5

GEISHA Id	Ptc1.Scherz.2007	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Scherz PJ, McGlinn E, Nissim S, Tabin CJ. Extended exposure to Sonic hedgehog is required for patterning the posterior digits of the vertebrate limb.Dev Biol. 2007 Aug 15;308(2):343-54. Epub 2007 May 31.
Copyright	Reprinted with permission from Elsevier. Copyright 2007 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204960.1)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 21

stage 24

Leg

Entry 6

GEISHA Id	Ptch1.Liu.2007	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Liu G, Moro A, Zhang JJ, Cheng W, Qiu W, Kim PC. The role of Shh transcription activator Gli2 in chick cloacal development. Dev Biol. 2007 Mar 15;303(2):448-60. Epub 2006 Dec 15
Copyright	Reprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204960.1)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 18

Hindgut

19-24

stage 22

Hindgut

25-30

stage 26

stage 28

stage 30

Hindgut

Entry 7

GEISHA Id	PTC1.Zhang.2001	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Zhang XM, Yang XJ (2001). Temporal and spatial effects of Sonic hedgehog signaling in chick eye morphogenesis. Dev Biol. 2001 May 15;233(2):271-90.
Copyright	Copyright © 2001 Academic Press. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 13

stage 18

Diencephalon
Eye
Head Mesenchyme

Optic Stalk
Pigmented Epithelium

19-24

stage 24

Eye
Retina

Optic Stalk

Entry 8

GEISHA Id	PTC.McKinnell.2004	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	McKinnell IW, Turmaine M, Patel K (2004). Sonic Hedgehog functions by localizing the region of proliferation in early developing feather buds. Dev Biol. 2004 Aug 1;272(1):76-88.
Copyright	Copyright © 2004 Published by Elsevier Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

25-30

stage 30

Feathers/Scutae

Control

31-33

stage 31

stage 33

Feathers/Scutae

Control

Entry 9

GEISHA Id	PTC.BREN-MATTISON.2002	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Yvette Bren-Mattison and Bradley B. Olwin. Sonic Hedgehog Inhibits the Terminal Differentiation of Limb Myoblasts Committed to the Slow Muscle Lineage. Dev Biol. 2002 Feb 15;242(2):130-48.
Copyright	Copyright © 2002 Elsevier Science (USA). All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained form NCBI (NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 24

Leg Mesenchyme

Entry 10

GEISHA Id	PTCH1.Moran.2011	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Moran CM, Salanga MC, Krieg PA. Hedgehog signaling regulates size of the dorsal aortae and density of the plexus during avian vascular development. Dev Dyn. 2011 Jun;240(6):1354-64.
Copyright	Copyright © 2011 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-11

stage 10

stage 11

Forebrain
Hindbrain
Lateral Plate Mesoderm
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Sclerotome
Somites
Splanchnic Mesoderm

Entry 11

GEISHA Id	PTCH1.Domowicz.2009	Data Source	Publication
Complete cDNA Template Probe	show ANCNTNATNNCATNTACTNCTNTTNCATANNCACCNCGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAG AGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCAGCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCG GCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGACCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTC GCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGGAGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGC TCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCGGCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGT GGGACTACGGGCGGCCAACCTAGAGACCAACGTAGAGGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTA AACTACACACGGCAGAAGATTGGAGAAGAGGCCATGTTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAA CTAATGTACTCACAACAGAAGCACTCCGGCAGCACCTTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTA CAACAGACAATGGAAGTTGGAACATTTATGTTATAAATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATT ATAGAATATCTTTATCCTTGCTTAATTATCACTCCTTTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTG CCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCAACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAA CTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAAAGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAAT CCTGCTGATCCTGATTGCCCAATCACAGCTCCCAATAAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTG GTGGATGCTATGGACTGTCAAGAAAATACATGCATTGGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTC TGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCATGTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAG GGATATGAATATGTTTCACATATCAACTGGAATGAGGATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATG TCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTACTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACAT CCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGTAGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACA ATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCCGTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTG CAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCTTTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGG AGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGCGTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGAC AGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGTGTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGG CTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTTCACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGT TCTGCTAATTTTTCCTGCTATACTGAGCATGGACCTTTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTT ACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAGCCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTC CACCCCCGTACAGCAGTCACAGTTTTGCACATGAAACTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATA TGATCCTCATACACAAGCGTACTACACCACTGCAGAGCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAA GATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGCTCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGC ATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCTCAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACC AAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGGCTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGAT GGACTAGATCTCACAGACATTGTACCACGGGATACACGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCAT TCTACAATATGTACATTGTGACACAGAAAGCAGACTATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTT CAGCAATGTGACATATGTTTTGTTGGAAGGAGATAGGCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTG CAAGGACTCCAGGATGCATTTGACAGTGACTGGGAAACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATG ATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAGGCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACA GCGTCTGGTGGATGCGGATGGAATCATTAACCCAAATGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCT GTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCTCACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAG AAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAGAATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGAC TTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGCTATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCA AATGGTTACCCATTTCTATTCTGGGAGCAGTACATTGGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGG CTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAAACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGAT GACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGGAATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCT GTTGGAATTGGTGTGGAATTCACTGTTCACATTGCTTTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTG TCCTTGCATTGGAACATATGTTTGCACCAGTGTTGGATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGG ATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGCTGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTG GTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCATACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTA CACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGTTTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTC TGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGGCATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCT GGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACTGAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGT CAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATCCAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACC CAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCCTTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGG CATTCAGGACCTAGCAATAAGGATCGCTTGAACCACAAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCA TGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCACTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCC TGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTTTCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTT GAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAAAGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCG AATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAATAAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAAC TGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTCCGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAG GTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Domowicz MS, Cortes M, Henry JG, Schwartz NB. Aggrecan modulation of growth plate morphogenesis. Dev Biol. 2009 May 15;329(2):242-57. Epub 2009 Mar 3.
Copyright	Copyright © 2009 Published by Elsevier Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204960.1)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

25-30

stage 29

Leg Bones

31-38

stage 38

Leg Bones

Tibia

Entry 12

GEISHA Id	PTC1.Dunn.2011	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Dunn IC, Paton IR, Clelland AK, Sebastian S, Johnson EJ, McTeir L, Windsor D, Sherman A, Sang H, Burt DW, Tickle C, Davey MG. The chicken polydactyly (Po) locus causes allelic imbalance and ectopic expression of Shh during limb development. Dev Dyn. 2011 May;240(5):1163-72.
Copyright	Copyright © 2011 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204960).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-24

stage 20

Leg
Spinal Cord

25-27

stage 27

Limb Buds

Entry 13

GEISHA Id	PTC1.Grevellec.2011	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Grevellec A, Graham A, Tucker AS. Shh signalling restricts the expression of Gcm2 and controls the position of the developing parathyroids. Dev Biol. 2011 May 15;353(2):194-205. Epub 2011 Feb 22.
Copyright	Copyright © 2011 Elsevier Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204960.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 16

Pharyngeal Arches and Clefts

19-24

stage 21

stage 22

stage 24

Pharyngeal Arches and Clefts
Unlabeled

A and B control embryos

25-27

stage 27

Pharyngeal Arches and Clefts

all

Entry 14

GEISHA Id	PTC1.Ohyama.2008	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Ohyama K, Das R, Placzek M. Temporal progression of hypothalamic patterning by a dual action of BMP. Development. 2008 Oct;135(20):3325-31. Epub 2008 Sep 11.
Copyright	requested from MP
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204960.1)

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 9

Head Process

13-18

stage 16

Neural Plate/Tube

stage 25

Neural Plate/Tube

Entry 15

GEISHA Id	PTCH1.Moran.2012	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Moran CM, Myers CT, Lewis CM, Krieg PA. Hedgehog regulates angiogenesis of intersegmental vessels through the VEGF signaling pathway. Dev Dyn. 2012 Jun;241(6):1034-42.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204960.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-10

stage 10

Neural Plate/Tube
Somites

control embryo

Entry 16

GEISHA Id	PTCH1.Wade.2012	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Wade C, Brinas I, Welfare M, Wicking C, Farlie PG. Twist2 contributes to termination of limb bud outgrowth and patterning through direct regulation of Grem1. Dev Biol. 2012 Oct 1;370(1):145-53.
Copyright	Copyright © 2012 Elsevier Inc. All rights reserved
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204960.1).

Stage

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Location (click to highlight)

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stage 25

Leg

Left side: control hindlimb

Entry 17

GEISHA Id	PATCHED.Manning.2007	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTATATTCGGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGTAGA GGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCCATG TTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGCACC TTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTATAA ATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACTCCT TTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGATCA ACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAATAA AGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCCAAT AAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGCATT GGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAACCAT GTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAATGAG GATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACTCTA CTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAGAGT AGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGTGCC GTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTTCCT TTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCATGC GTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCAAGT GTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCATTTT CACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGACCT TTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATCGAG CCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATGAAA CTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCAGA GCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAAGC TCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACTCT CAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTGGG CTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATACA CGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGACT ATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGATAG GCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGGAA ACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAACAG GCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCGGATGGAATCATTAACCCAAA TGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGGCCT CACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATAG AATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAGC TATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACATT GGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTAA ACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTGG AATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGCT TTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTGG ATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTGC TGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACCA TACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGGT TTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAGG CATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCACT GAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAATC CAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTCC TTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCAC AAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATCA CTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGGGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGTGAA AGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAAT AAGGATGGTAACTGAAGGGAAGAGGAGGGCAAAGATTGAAAACTGTTTTTCCAGGAACTGCTTGGAAAAGAACTTGCTC CGACATTGGTAGAAAAGGACGTGCTTGCATCAAGGACAACAAGGTTACTGGTTACTGGTAACCCCATTGGTATTATTA
Citation	Manning L, Ohyama K, Saeger B, Hatano O, Wilson SA, Logan M, Placzek M. Regional morphogenesis in the hypothalamus: a BMP-Tbx2 pathway coordinates fate and proliferation through Shh downregulation. Dev Cell. 2006 Dec;11(6):873-85.
Copyright	Copyright © 2006 Elsevier Inc. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204960.1

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 11

Hypothalamus

stage 13

Hypothalamus

Entry 18

GEISHA Id	PTC.Marcucio.2005	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTGATATTCGGCGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGT AGAGGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCC ATGTTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGC ACCTTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTA TAAATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACT CCTTTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGA TCAACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAA TAAAGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCC AATAAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGC ATTGGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAAC CATGTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAAT GAGGATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACT CTACTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAG AGTAGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGT GCCGTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTT CCTTTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCA TGCGTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCA AGTGTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCAT TTTCACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGA CCTTTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATC GAGCCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATG AAACTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGC AGAGCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCA AGCTCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACAC TCTCAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCT GGGCTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGAT ACACGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAG ACTATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGA TAGGCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGG GAAACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAA CAGGCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGAATCATTAACCC AAATGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGG CCTCACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCA TAGAATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAG AGCTATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTAC ATTGGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCC TAAACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAAT TGGAATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATT GCTTTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGT TGGATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTT TGCTGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGA CCATACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGA GGTTTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTC AGGCATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCC ACTGAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAA ATCCAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACC TCCTTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAAC CACAAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTA TCACTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAG CTTTCCATCCTGTGAAGAATACAATGAAGATGACCGTGAGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGT GAAAGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAG AATAAGGATGGTAACTGAAGGGAAGAGGAGGCCAAAGATTGAAAACTGTTTTTCCAGAACTGCTTGAAAAGAACTGCTC GACATTGTAGAAAAGGACGTGCTGCATCAGGACAACAGTTTACTGTTACTGTAACC
Citation	Marcucio RS, Cordero DR, Hu D, Helms JA. Molecular interactions coordinating the development of the forebrain and face. Dev Biol. 2005 Aug 1;284(1):48-61.
Copyright	Copyright © 2005 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_204960.2). Also known as: PTC1; PTCH

Stage

Image (click image to view full size)

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19-22

stage 20

stage 22

Diencephalon
Forebrain

ne: neuroectoderm
stage 20+

all

Entry 19

GEISHA Id	Ptc1.Abzhanov.2007	Data Source	Publication
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTGATATTCGGCGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGT AGAGGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCC ATGTTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGC ACCTTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTA TAAATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACT CCTTTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGA TCAACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAA TAAAGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCC AATAAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGC ATTGGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAAC CATGTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAAT GAGGATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACT CTACTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAG AGTAGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGT GCCGTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTT CCTTTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCA TGCGTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCA AGTGTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCAT TTTCACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGA CCTTTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATC GAGCCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATG AAACTCAATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGCA GAGCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCAA GCTCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACACT CTCAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCTG GGCTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGATA CACGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAGA CTATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGAT AGGCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGGG AAACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAAC AGGCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGAATCATTAACCCA AATGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTTCAAGCCAACATCCGGCC TCACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCATA GAATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAGAG CTATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTACAT TGGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCCTA AACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAATTG GAATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATTGC TTTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGTTG GATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTTTG CTGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGACC ATACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGAGG TTTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTCAG GCATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCCAC TGAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAAAT CCAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACCTC CTTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAACCA CAAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTATC ACTACTGTGATGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAGCTT TCCATCCTGTGAAGAATACAATGAAGATGACCGTGAGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGGGTGTGAAA GAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAGAATA AGGATGGTAACTGAAGGGAAGAGGAGGCCAAAGATTGAAAACTGTTTTTCCAGAACTGCTTGAAAAGAACTGCTCGACA TTGTAGAAAAGGACGTGCTGCATCAGGACAACAGTTTACTGTTACTGTAACC
Citation	Abzhanov, A., Cordero, D. R., Sen, J., Tabin, C. J. and Helms, J. A. Cross–regulatory interactions between Fgf8 and Shh in the avian frontonasal prominence. Congenit Anom (Kyoto). 2007 Dec;47(4):136-48.
Copyright	Copyright © 2007 The Authors, Journal compilation © 2007 Japanese Teratology Society
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204960.2).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 15

Neural Crest
Surface Ectoderm

neuroectoderm, facial ectoderm, frontonasal neural crest

19-24

stage 20

stage 22

Diencephalon
Surface Ectoderm
Telencephalon

facial ectoderm, brain neuroepithelium

stage 25

Diencephalon
Surface Ectoderm
Telencephalon

facial ectoderm, brain neuroepithelium

all

Entry 20

GEISHA Id	PTC.Kahane.2013	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CGCACCGGCGGCGGCAACATGGCCTCGGCCGCTGACGCCTTAGAGCCGGAGAGCGGCAGCAGCACCGCGGGCGGCGGCA GCCACCCCGTTCGGGCGGCGAGGAGTGCCCGCGGCCGGCGGCGGCGGAGCGGAGGGACCCGGCGCGCCGCGGCGCCCGA CCGGGAGTATCTGCAGCGGCCGAGCTACTGCGATGCGGCGTTCGCCTTGGAGCAGATCGCAAAGGGGAGAGCTACCGGG AGGAGAGCGCCGCTGTGGCTGCGGGCGAAGTTTCAGAGACTGCTCTTTAACCTGGGCTGCTACATTCAGAAAAACTGCG GCAAGTTCCTGGTGGTCGGCCTGCTGATATTCGGCGCGTTCGCGGTGGGACTACGGGCGGCCAACCTAGAGACCAACGT AGAGGAGCTGTGGGTGGAAGTTGGTGGACGAGTGAGTCGGGAGTTAAACTACACACGGCAGAAGATTGGAGAAGAGGCC ATGTTTAACCCCCAGCTCATGATTCAGACTCCACAGGAAGATGGAACTAATGTACTCACAACAGAAGCACTCCGGCAGC ACCTTGACTCTGCACTTCAGGCCAGCAGAGTACATGTTTATATGTACAACAGACAATGGAAGTTGGAACATTTATGTTA TAAATCAGGAGAACTCATCACAGAAGCAGGCTATATGGACCAGATTATAGAATATCTTTATCCTTGCTTAATTATCACT CCTTTGGACTGCTTCTGGGAGGGAGCAAAGCTACAGTCTGGAACTGCCTATCTATTAGGGAAGCCTCCTTTGCAGTGGA TCAACTTTGACCCCTTAGAATTCTTGGAAGAGTTAAAGAAAATAAACTACCAAGTGGAGAGCTGGGAAGAAATGCTGAA TAAAGCAGAGGTTGGTCATGGTTATATGGATCGACCTTGCCTGAATCCTGCTGATCCTGATTGCCCAATCACAGCTCCC AATAAAAATTCTACCAAGCCTCTTGATGTAGCCCTTGTTTTGAGTGGTGGATGCTATGGACTGTCAAGAAAATACATGC ATTGGCAGGAAGAGTTAATTATAGGTGGTACAGTCAAGAACAGTTCTGGTAAACTTGTCAGTGCCCAGGCTTTGCAAAC CATGTTTCAGTTAATGACTCCTAAGCAAATGTATGAGCACTTCAAGGGATATGAATATGTTTCACATATCAACTGGAAT GAGGATAAAGCAGCAGCAATTCTGGAAGCCTGGCAGAGGATGTATGTCGAGGTTGTTCATCAAAGTGTTGCACAAAACT CTACTCAGAAGGTGCTTTCCTTTACTACAACTACCCTGGACGACATCCTAAAGTCATTTTCTGATGTCAGTGTTATCAG AGTAGCTAGTGGCTACTTACTAATGCTTGCCTACGCCTGTTTAACAATGCTGAGGTGGGATTGTGCCAAGTCTCAAGGT GCCGTGGGGCTGGCAGGAGTCTTGTTGGTTGCACTGTCAGTGGCTGCAGGCTTGGGTCTGTGCTCACTGATTGGAATTT CCTTTAATGCTGCCACAACTCAGGTTCTGCCTTTTCTTGCTCTCGGAGTTGGTGTAGATGATGTTTTCCTTCTAGCCCA TGCGTTTAGTGAAACAGGACAGAATAAGAGAATTCCATTCGAGGACAGAACAGGTGAATGTTTAAAGCGAACAGGAGCA AGTGTAGCCCTTACATCTATCAGCAATGTTACTGCATTCTTTATGGCTGCCTTAATCCCTATTCCTGCTTTACGAGCAT TTTCACTCCAAGCAGCAGTTGTGGTAGTATTCAACTTTGCAATGGTTCTGCTAATTTTTCCTGCTATACTGAGCATGGA CCTTTATCGTCGAGAAGACAGGAGACTGGATATATTCTGCTGTTTTACAAGTCCATGTGTCACCAGAGTGATTCAGATC GAGCCTCAAGCGTATGCAGAAAATGACAATATTTGTTACAGTTCTCCACCCCCGTACAGCAGTCACAGTTTTGCACATG AAACTCAGATTACAATGCAGTCTACAGTGCAGTTGCGCACTGAATATGATCCTCATACACAAGCGTACTACACCACTGC AGAGCCACGATCAGAAATATCAGTACAGCCTGTGACAGTGACTCAAGATAGTCTTAGCTGCCAAAGCCCAGAAAGCGCA AGCTCAACAAGGGATTTGCTTTCCCAGTTCTCAGACTCCAGTGTGCATTGCCTTGAGCCACCCTGTACGAAGTGGACAC TCTCAACTTTTGCAGAAAAACATTATGCTCCGTTCCTCCTAAAACCAAAAGCTAAGGTTGTGGTTATTTTTCTTTTCCT GGGCTTACTTGGGCTCAGCCTCTATGGAACTACCCGGGTGAGAGATGGACTAGATCTCACAGACATTGTACCACGGGAT ACACGGGAATATGACTTTATTGCTGCGCAGTTCAAATACTTCTCATTCTACAATATGTACATTGTGACACAGAAAGCAG ACTATCCAAATGTCCAGCACTTACTTTACGAACTTCACAGAAGTTTCAGCAATGTGACATATGTTTTGTTGGAAGGAGA TAGGCAGCTTCCCAAAATGTGGTTACATTACTTTCGAGACTGGCTGCAAGGACTCCAGGATGCATTTGACAGTGACTGG GAAACTGGGAAAATCACTTACAGCAACTATAAAAATGGATCTGATGATGCTGTTCTGGCTTATAAACTCTTGGTACAAA CAGGCAACCGAGCAAAGCCCATTGACATCAGTCAGTTGACTAAACAGCGTCTGGTGGATGCAGATGGAATCATTAACCC AAATGCTTTCTACATCTACCTGACAGCCTGGGTTAGCAATGACCCTGTGGCCTATGCTGCCTCTCAAGCCAACATCCGG CCTCACCGCCCAGAATGGGTGCATGACAAAGCAGACTATATGCCAGAAACAAGGCTAAGAATTCCAGCGGCTGAGCCCA TAGAATATGCTCAGTTTCCTTTCTACCTCAATGGATTACGTGAGACTTCTGACTTTGTGGAAGCTATTGAGAAAGTGAG AGCTATCTGCAATAACTACACAAGCCTCGGGATCGCTAGCTACCCAAATGGTTACCCATTTCTATTCTGGGAGCAGTAC ATTGGGCTTCGTCATTGGCTCCTCTTATCCATTAGCGTGGTTTTGGCTTGCACGTTTCTGGTGTGTGCCCTCTTCCTCC TAAACCCCTGGACAGCTGGGATCATTGTGGTGGTGCTGGCTCTGATGACTGTGGAGCTGTTTGGCATGATGGGTTTAAT TGGAATAAAACTAAGTGCAGTGCCTGTGGTTATCCTGATTGCTTCTGTTGGAATTGGTGTGGAATTCACTGTTCACATT GCTTTGGCATTTTTAACTGCCATAGGAGATAAGAACCGTAGGGCTGTCCTTGCATTGGAACATATGTTTGCACCAGTGT TGGATGGAGCTGTGTCCACTCTTCTTGGAGTGTTAATGCTTGCAGGATCAGAGTTTGATTTTATTGTCAGGTATTTCTT TGCTGTTTTGGCAATCTTAACCATTCTGGGAGTTCTCAATGGATTGGTGCTGCTTCCTGTTCTTCTTTCTTTCTTTGGA CCATACCCTGAGGTTTCTCCAGCCTGTGGTCGAAACAGATTACCTACACCATCTCCTGAGCCACCTCCGAGTATTGTGA GGTTTGCACTGCCGCCTGGGCACACAAATAATGGGTCAGATTCGTCTGATTCAGAGTACAGCTCTCAAACCACCGTGTC AGGCATCAGTGAGGAGCTCCATCATTATGAGGCCACCCAAAGCCCTGGGATACCAGTCCATCAAGTAGTAGTGGAAGCC ACTGAGAATCCTGTCTTTGCAAGATCCACTGTGGTACAGCCAGAGTCAAGGCATCAGTCAAGTCCCAGATTGCAATCAA ATCCAGAGGCTGGCACACAGCAGGTGTGGCATCAGGGCAGACAACCCAAGCAGGAAGTGAGGGAAGGACTGCGACCACC TCCTTACCGCCCTCGCAGGGACGCTTTTGAAATTTCTACTGAAGGGCATTCAGGACCTAGCAATAAGGATCGCTTGAAC CACAAGGCTCATTCTCATAACATGAGAAGCCCAGCATTTGGTGCCATGGGTGTTCCAGGATCTGCCTACTGCCAGCCTA TCACTACTGTGACTGCTTCGGCTTCAGTGACTGTTGCTGTCCACCCTGCTGTGCACAGCCACAACTCTTGCAGAGGGAG CTTTCCATCCTGTGAAGAATACAATGAAGATGACCGTGAGATGTTTGAGGACCCCCATGTGCCTTTTAATGTGCGGTGT GAAAGAAGAAATTCTAAAGTAGAAGTTATAGAGCTTCAGGATGTCGAATGTGAGGAGAGGACAGCTGGCAAAATCTCAG AATAAGGATGGTAACTGAAGGGAAGAGGAGGCCAAAGATTGAAAACTGTTTTTCCAGAACTGCTTGAAAAGAACTGCTC GACATTGTAGAAAAGGACGTGCTGCATCAGGACAACAGTTTACTGTTACTGTAACC
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence was obtained from NCBI (acc # NM_001305245.1).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-17

stage 17

Myotome

all

Data from NCBI Unigene EST Profile
Unigene ID: Gga.474

Mouse

Emage	MGI:105373
Eurexpress	MGI:105373
MGI GXD	MGI:105373

Frog

Xenbase

488221, 1033867

Fruit Fly

BDGP	FBgn0003892

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-980526-196

Home

Contact

PTCH1patched 1

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Entry 20

Mouse

Frog

Fruit Fly

Zebra Finch

Zebrafish

PTCH1
patched 1