GEISHA - A Chicken Embryo Gene Expression Database
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MCF2
MCF.2 cell line derived transforming sequence

Gene
Official SymbolMCF2
Official Full NameMCF.2 cell line derived transforming sequence
CGNC ID4948
also known asproto-oncogene DBL
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Sequence Information
Genomic
RNAXM_420239
PolypeptideXP_420239
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4168ENSG00000101977MIM:311030
Mouse109904ENSMUSG00000031139All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1) MGI:96932
Xenopus100489667949775
Zebrafish559907, 557201ENSDARG00000056603, ENSDARG00000022895ZDB-GENE-030616-52, ZDB-GENE-091118-4ZFIN:ZDB-GENE-030616-52, ZFIN:ZDB-GENE-091118-4
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422253
Ensembl GeneENSGALG00000006562
KEGGgga:422253
GEISHA IdMCF2.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerGAGGATTTTCTGCTCAAGTTACCG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTCCATCTGCTGGTTGGCAAGcDNA Template Length896
Forward cDNA Template Probeshow
CAGGGCCTGCTGAAGGCGAGTATGAAGATCCAAGGGTCTTCTGCAGCCGCATCTGCTTCCTTTTGATCTCGTCAGACAA
GACATCAGAATGGTGCCGCAGCTCGTTGCACTGCTGGCAGATTAAGTTGAGCGCATANTGATGATTTGCTGCTAGCTGG
TGTCCGTGTAGTATCACCACCTGAGCCTTCCCTAACAGATCCTGAGCCATACCATCAAAATGACTCAAGTCCTTCAGCC
TCTGTTTCACTTGGGAGACACTGTCTCCAGTGTCAGGCAGTTTTGCTTGTTGACCCATTAAAAATTCAATGGCATTCTT
GACCTCTTGAAAACTCTGCTCAAACTTCCACAGTTGTAAATACTGCTCCATTTTCAACTGATGCTTTTCCCAGAAGCCA
TCAAAAGCAGTCTCCATCTCCCGCAGCTGCCCGAGTAGCCTATTCACAGTCTCCCAGTCTCCAGGTCTCTCTCGGTGCT
GGTCCTGGCTGCATTCACCCACATCAGGATCTTCTAAATTGCTTAAAAGCAACTTTCCTTCTTTTGTGACTGCTGTAAT
ATCTTCCTTGAGCTGGAAGTACTTCTCAGTGCGCAGGGCCAGGATGCGCTCAATGGAATACATGTCCTCTGGTAGCTCA
GTCTCTGCCAGCTCTGTGCCAAAAGATTGTAACATCTGTGCAATTTCCTTCACGGTTAGTGCAAAACTCTCTATTGCAG
TCCTGAAGATGACCCACTCGCTGTGGCAGTACTCCAAGGTGCCTCCAAACTCTGGGGTTAGCTGCTGCTCATCAATGTA
TGTCAGCAGGTCGCTAACTGAGCTCAGCATAACAACCGGTAACTTGAGCAAAAAAATCCTCAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Area Pellucida
Primitive Streak
 
4-6
stage 4
stage 4
stage 5
Area Pellucida
Primitive Streak
Low level expression.
7-12
stage 9
Extraembryonic Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
very low expression
13-18
stage 13
stage 15
stage 15
stage 15
stage 16
Cranial Ganglia
Ear/Otic Placode
Extraembryonic Mesoderm
Eye
Forebrain
Heart
Hindbrain
Midbrain
Neural Plate/Tube
Sclerotome
Sinus Venosus
Spinal Cord
 
19-24
stage 22
stage 22
stage 23
Diencephalon
Eye
Gut
Hindbrain
Notochord
Spinal Ganglia and Nerves
Telencephalon
 
25
stage 25
stage 25
Eye
Gut
Leg Mesenchyme
Notochord
Pharyngeal Arches and Clefts
Spinal Ganglia and Nerves
Widespread Expression
Wing Mesenchyme
 

Mouse

EmageMGI:96932
MGI GXDMGI:96932

Frog

Xenbase949775

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030616-52, ZDB-GENE-091118-4
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