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A chicken embryo gene expression database

	Anatomical Location
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	Gene Name
	GEISHA ID
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COCH
cochlin

The human orthologue of this gene is associated
with the following human disease:

Deafness, autosomal dominant 9

Gene

Official Symbol	COCH
Official Full Name	cochlin
CGNC ID	49473
also known as	cochlin\|Coch-5B2\|coagulation factor C homolog, cochlin (Limulus polyphemus)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204937
Polypeptide	NP_990268
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.2805

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	1690	ENSG00000100473	MIM:603196	MIM:603196
Mouse	12810	ENSMUSG00000020953	All phenotypic alleles (5):Targeted, knock-out(1) Targeted, other(4)	MGI:1278313
Xenopus	100497833			982365
Zebrafish	368851	ENSDARG00000024032	ZDB-GENE-030616-403	ZFIN:ZDB-GENE-030616-403

Gene Ontology

Molecular Function
Biological Process	regulation of cell shape, sensory perception of sound
Cellular Component	extracellular region

Links to other databases

Entrez Gene	395779
Ensembl Gene	ENSGALG00000009920
KEGG	gga:395779

GEISHA Id	COCH5B2.Heller.1998	Data Source	Publication
Complete cDNA Template Probe	show GTCGGCTGGGTGCGCCGCGCCTCCATTCGCGCCCGGGAGCGTGTCCCGCCGCCATGCAGTTCGCCCCCCTTCTCCTCGG CGTCTTTCTGCTCTGCGGCTCCGCGCGTGGGAGCGACAGCTCAGCTTCCAATGCTATCACATGCTTTACAAGAGGACTT GACCTTAGAAAGGAGACAGAAGATGTCCTTTGCCCAGCAAACTGTCCTCTATGGCAATTCTATGTCTTTGGGGATGGAA TTTATGCCTCTCTTTCCAGTGTCTGTGGAGCTGCCATACACAGAGGGGTGATCACCAACGCAGGAGGAGCTGTAAGAGT ACAGACTCTCCCAGGACAGGAAAACTACCCGGCTGTACATGCCAATGGGATCCAGTCTCAGGTGCTCTCTAGATGGGCT TCATCTTTCTCAGTGACTCCAGGTACCAACAACCTAGCGCTTGAAGCAGTGGGACGATCAGTTGCAACAGCACGACCTG CTACAGGCAAAAGACCTAAGAAGACCCTCGAGAAAAAGGCTGGAAACAAAGACTGTAAAGCTGATATTGCATTTCTCAT TGATGGAAGTTACAACATCGGCCAACGTAGATTTAATCTGCAGAAAAACTTTGTTGGAAAAGTAGCGGTAATGTTGGGA ATTGGAACGGAAGGGCCTCATGTTGGAGTTGTACAAGCCAGTGAACATCCAAAAATTGAATTCTACCTGAAAAACTTCA CTGCTGCAAAAGAGGTTTTGTTTGCCATAAAAGAATTAGGGTTCAGAGGAGGCAATTCCAACACAGGGAAAGCTCTGAA ACACGCAGCTCAGAAATTCTTCTCTATGGAAAATGGAGCACGCAAAGGAATACCCAAAATCATTGTAGTGTTTCTAGAT GGCTGGCCCTCAGATGATTTAGAAGAAGCTGGTATAGTGGCCAGAGAATTTGGAGTCAATGTGTTCATTGTATCTGTAG CAAAACCCACAACAGAGGAACTGGGAATGGTACAGGACATTGGTTTTATTGACAAAGCTGTCTGTCGCAACAATGGCTT CTTCTCTTACCAAATGCCCAGCTGGTTTGGCACCACCAAATATGTAAAACCTCTTGTCCAGAAATTGTGTTCACATGAG CAAATGTTGTGTAGCAAGACATGCTATAACTCTGTCAACATAGGCTTCTTGATAGACGGTTCCAGCAGTGTTGGAGAGA GCAACTTCCGACTCATGCTTGAATTCATCAGCAATGTTGCAAAGGCTTTTGAGATCTCTGATATTGGTTCCAAGATTGC AACTGTGCAGTTCACATACGATCAGCGTACTGAGTTCAGCTTCACAGACTACACCACAAAGGAAAAGGTCCTCTCTGCT ATCCGGAACATTCGTTACATGAGCGGCGGCACTGCTACTGGTGATGCCATTTCTTTCACAACCAGAAACGTATTTGGGC CGGTAAAGGACGGAGCAAACAAAAATTTCCTTGTAATTCTGACTGACGGTCAGTCTTACGACGATGTTAGAGGACCTGC TGTTGCTGCACAAAAAGCAGGAATAACGGTCTTCTCTGTTGGTGTTGCCTGGGCACCTCTGGATGATCTGAAAGACATG GCCTCTGAACCAAGGGAATCTCATACCTTCTTCACTAGGGAGTTCACTGGATTGGAGCAGATGGTTCCTGATGTTATTC GAGGCATCTGTAAAGATTTTTTGGACTCTAAGCAATAACAGAAATCTGCTGTTGGATAGTTTCTGAAACTAAAAATTAT GAGACTGGAACGGTCCCTCTTAAATACACAAGTTTTATTATGTATACTATCATCCTGTAAGGGAAGGAGAAGGCTACTT TCTGTA
Citation	Heller S, Sheane CA, Javed Z, Hudspeth AJ. Molecular markers for cell types of the inner ear and candidate genes for hearing disorders. Proc Natl Acad Sci U S A. 1998 Sep 15;95(19):11400-5.
Copyright	Copyright © 2012 National Academy of Sciences. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204937.1)