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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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NEUROD1
neuronal differentiation 1

The human orthologue of this gene is associated
with the following human diseases:

Gene

Official Symbol	NEUROD1
Official Full Name	neuronal differentiation 1
CGNC ID	6765
also known as	NEUROD, neurogenic differentiation factor 1\|neurogenic differentiation 1, NeuroD, Neurogenic differentiation factor 1 (NeuroD1)
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204920
Polypeptide	NP_990251
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.1840

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	4760	ENSG00000162992	MIM:125853	MIM:601724
Mouse	18012	ENSMUSG00000034701	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3)	MGI:1339708
Xenopus	100038290, 444022, 378541			963756
Zebrafish	30169	ENSDARG00000019566	ZDB-GENE-990415-172	ZFIN:ZDB-GENE-990415-172

Gene Ontology

Molecular Function	DNA binding, protein dimerization activity
Biological Process	cell differentiation, nervous system development, regulation of transcription, DNA-templated, more...transcription, DNA-templated
Cellular Component	cytoplasm, nucleus

Links to other databases

Entrez Gene	395754
Ensembl Gene	ENSGALG00000008908
KEGG	gga:395754

Entry 1

GEISHA Id	pgp1n.pk006.n18	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show TCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATATATGAGATCTCTATTTTTCAACCAACGTTT TACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTACAGAATTTTTAATGACTTTTTATAACGTGG ATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAAAGGTAGAATTATATCTAATTTATACGAAA TAATTTAACTAATTTAAACCAGCAGAAAAGTGCTTAGAGAAGTTCTGTTGCCTTAGCACTGCTTTCCTTTCAAATCGTT AAAGTAAAACAACCAACCAACACTAAGCGCAATCCGGGCGATTTCTTTCCCATGAAAGTCGTTTTAGTTCCTTTTTCTT TCTTTCTTCTTATTCCTTTCCCCCTTACGATCAGAACCAGACCCCCAGCTCTTGAGAAGATAGAAGAACGAGAGACTTA TTTTCTATTAAAACATATCAGTTCAACACATGACTTGCACAAACTTGTATATAAATATTATAAGTAAATGCCAACACCC TTTTTAAATCGAAAGCTGCTTGACTATCACATACAATTTGCACTGTTTCTTTTTAGTCTCTGAGCCCCTTGGCATTCCG TGGTGTTTTATTTTCCTACAGAGAACTTGAAGCTCTCGGTGTTTCCGGACGCTGTAACTGCATGATTTTAGACATATTC ACACGATCCGTGGTTGTCATTTGCTCGTCTCATCACTCGGAACCTAAAGCTGAGCAGGTCGTTGGAGTCGGGCTGTATA CCTATTGTAGTCGATTAGTACGGTAGCTTGAAACAATTCAAACCATTTAATCCGTATTAGAACATAGCTATTGCATGTA CAATGCAGTCAAAAATAATGCTGTTTGAATGTAACTCTGGTTCAACTGAATCAAACTGTACTGAAATTTGGTTTAATCC TGGAAATAAGGTTAAGGCCCACGGGATTTAGGAAATGTCATCCTTTGCACAACCAAAATGAACATTGGTCGAGGTGCAT TCCCCTCAAGGGATTTATTTTTCTAGGGGAGTAATCAAGGGATATGTTTATCTGAAGCCCGGGAAGGCGACCTATTTTG GAAAAAAATCGATTTAAAAACCCTTTCCCCGACCAAAAAAAAAAAAAA

Stage

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Location (click to highlight)

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4-6

stage 4

Epiblast
Primitive Streak

13-18

stage 16

stage 17

Cranial Ganglia
Spinal Ganglia and Nerves

19-24

stage 21

stage 22

Cranial Ganglia
Nasal Placcode/Nerve
Spinal Ganglia and Nerves

25-26

stage 25

stage 26

Cranial Ganglia
Forebrain
Nasal Placcode/Nerve
Spinal Ganglia and Nerves

Entry 2

GEISHA Id	NeuroD.Barembaum.2007	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Barembaum M, Bronner-Fraser M. Spalt4 mediates invagination and otic placode gene expression in cranial ectoderm. Development. 2007 Nov;134(21):3805-14.
Copyright	Published by The Company of Biologists 2007
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204920).

Stage

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stage 13

Cranial Ganglia

Trigeminal Ganglia
Trigeminal Ganglion

Entry 3

GEISHA Id	NeuroD.Abu-Elmagd.2001	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Abu-Elmagd M, Ishii Y, Cheung M, Rex M, Le Rouëdec D, Scotting PJ. cSox3 expression and neurogenesis in the epibranchial placodes. Dev Biol. 2001 Sep 15;237(2):258-69.
Copyright	Copyright © 2001 Academic Press. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204920).

Stage

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13-18

stage 18

Pharyngeal Arches and Clefts
Placcode

First Nodose Placode
Geniculate Placode
Petrosal Placode
Second Nodose Placode
Trigeminal Placode

Entry 4

GEISHA Id	NeuroD.Bok.2005	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Bok J, Bronner-Fraser M, Wu DK. Role of the hindbrain in dorsoventral but not anteroposterior axial specification of the inner ear. Development. 2005 May;132(9):2115-24. Epub 2005 Mar 23.
Copyright	Copyright for articles in Development are retained by the authors. Permission granted by MBF.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204920).

no images

Entry 5

GEISHA Id	NEUROD1.Bok.2011	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Bok J, Raft S, Kong KA, Koo SK, Dräger UC, Wu DK. Transient retinoic acid signaling confers anterior-posterior polarity to the inner ear. Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):161-6. Epub 2010 Dec 20.
Copyright	copyright © by the National Academy of Sciences
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204920).

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 11

Ear/Otic Placode

13-17

stage 17

Ear/Otic Placode

Entry 6

GEISHA Id	NEUROD.Ma.2008	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Ma W, Yan RT, Mao W, Wang SZ. Neurogenin3 promotes early retinal neurogenesis. Mol Cell Neurosci. 2009 Feb;40(2):187-98. Epub 2008 Nov 6.
Copyright	Copyright © 2008 Elsevier Inc. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204920.1 ).

Stage

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Location (click to highlight)

Comments (click to highlight)

31-32

stage 32

Eye
Retina

Entry 7

GEISHA Id	NEUROD.Yan.2005	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Yan RT, Ma W, Liang L, Wang SZ.. bHLH Genes and Retinal Cell Fate Specification. Mol Neurobiol. 2005 October; 32(2): 157171.
Copyright	© Springer, Part of Springer Science+Business Media
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204920.1).

no images

Entry 8

GEISHA Id	NEUROD.Sabado.2012	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Sabado V, Barraud P, Baker CV, Streit A. Specification of GnRH-1 neurons by antagonistic FGF and retinoic acid signaling. Dev Biol. 2012 Feb 15;362(2):254-62.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204920.1).

no images

Entry 9

GEISHA Id	NEUROD.Bell.2008	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Bell D, Streit A, Gorospe I, Varela-Nieto I, Alsina B, Giraldez F. Spatial and temporal segregation of auditory and vestibular neurons in the otic placode. Dev Biol. 2008 Oct 1;322(1):109-20. doi: 10.1016/j.ydbio.2008.07.011. Epub 2008 Jul 19.
Copyright	Copyright © 2013 Elsevier B.V. All rights reserved.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204920.1

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Ear/Otic Placode

13-18

stage 13

stage 15

stage 17

stage 18

Ear/Otic Placode

19-24

stage 20

stage 24

Ear/Otic Placode

25-30

stage 27

Ear/Otic Placode

stage 31

Ear/Otic Placode

Entry 10

GEISHA Id	NEUROD.Yan.2004	Data Source	Publication
Complete cDNA Template Probe	show CGGCCCCGGGCCCGGCCCCCGCCCGCCGCCGCCGCGCTCCGCCGGCCCCGCTATAAAACCGGGGCGGCCGGCGCTGCGC CCTCGGAACGACGCGCCGCGCCCTCGCACTTGGAGCGCGCCGGCGGACGGCGGCGGGGTTATGCGACCGTCACCGCGCG GAAGAGGCTGAGAACGGAGGCGCTCGCCATGACCAAGTCGTACAGCGAGAGCGGGCCGGCGGGCGAGCCGCAAGCGCAA GCCCCCCCCGGCTGGGCGGCAGGGTGCCTGAGCCCGCCCGCCGACGGGCCCGAGGCCGACAAGAAGGAGGAGGACCTGG AGGCTCTGCACGGCGAGGCTGAAGAGGACGCGCTGCGGAACGGCGAGGAGGAGGACGAGGAGGACGAGCTGGACGAGGA GGAAGAGGAAGAGGAGGAAGAGGAGGACGACGAGCAGAAGCCCAAGCGGCGCGGCCCCAAGAAGAAGAAGATGACCAAG GCGCGCCTGGAGCGCTTCAAGCTGCGCCGCATGAAGGCCAACGCGCGGGAGCGCAACCGCATGCACGGCCTGAACGCGG CCCTGGACAACCTGCGCAAGGTCGTGCCCTGCTACTCCAAGACGCAGAAACTCTCCAAGATCGAGACGCTGCGCCTGGC CAAGAACTACATCTGGGCGCTGTCTGAGATCCTGCGCTCCGGCAAGAGCCCCGACCTGGTCTCATTCGTGCAGACGCTG TGCAAGGGTCTCTCGCAGCCCACCACCAACCTGGTGGCCGGCTGCCTGCAGCTCAACCCGCGGACGTTCCTGCCCGAGC AGAGCGCGGACGCCGCCCCGCACCTGCCGCCCGCGGGAGCGCCCTTCGCTCCGCCGCCCTTCCCCTACGCGTCGCCGGG GCTGCCCAGCCCGCCCTACGGCACCATGGACAGCTCCCACCTCTTCCACCTCAAGCCGCCGCACGCCTACGGCGCCGCG CTCGAGCCCTTCTTCGAGGGCGGCCTGCCCGAGGGCGCCGGCCCCGCCTTCGACGGCCCGCTCAGCCCGCCCCTCAGCA TCTACGGCAACTTCTCTTTCAAGCACGAACCCGCCGCCGACTTCGACAATAGCTACGCCTTCACCATGCACTACCCCGC CGGGCCGCTGCCCGCCGCGCCCGCCCACGCCGCCGTCTTCTCGGGCGCCGCCGCCCGCTGCGAGCTGCCCGCCGACGGC CTGGCGCCCTACGAGGGGCACCCGCACCACGAGCGCGTCCTGAGCGCGCAGCTCAGCGCCATCTTCCACGAGTGAGCGC CGCCGCCGAGCGGGGCCACCAGCAATAATTCGGATCTATGCAATTTTTAACCTCGCGATGGGCCAATTACAAAATATAT ATGAGATCTCTATTTTTCAACCAGCGTTTTACTACTTGTTACCTTTCCCGCGCCGAATTATTTTGTTGTGGTTTTGTAC AGAATTTTTAATGACTTTTTATAACGTGGATTTCCTATTTTAAACCATGCAGCTTCATCAATTTTTATACATATCGGAA AGGTAGAATTATATCTAATTTATACGAAATAAATTTAACTAATTTTAAACCAGGCAGAAAAGTGCCTTAGAAAAATTCC TGTTGGCCTTTAGCAC
Citation	Yan RT, Wang SZ. Requirement of neuroD for photoreceptor formation in the chick retina. Invest Ophthalmol Vis Sci. 2004 Jan;45(1):48-58
Copyright	Copyright 2004 The Authors
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204920.1).