Geisha

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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ACAN
aggrecan

Gene

Official Symbol	ACAN
Official Full Name	aggrecan
CGNC ID	5079
also known as	AGC1, aggrecan core protein\|CSPCP\|aggrecan 1\|aggrecan chondroitin sulfate CS2 domain\|cartilage-specific proteoglycan core protein\|chondroitin sulfate proteoglycan core protein\|proteoglycan core protein
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204955
Polypeptide	NP_990286
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.3977

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human
Mouse	11595	ENSMUSG00000030607	All phenotypic alleles (7):Spontaneous(2) Targeted, other(5)	MGI:99602
Xenopus	100491091			921493
Zebrafish	559593, 497505	ENSDARG00000045799	ZDB-GENE-100422-16, ZDB-GENE-050208-221, ZDB-GENE-100422-16	ZFIN:ZDB-GENE-100422-16, ZFIN:ZDB-GENE-050208-221, ZFIN:ZDB-GENE-100422-16

Gene Ontology

Molecular Function	calcium ion binding, carbohydrate binding, hyaluronic acid binding
Biological Process	cell adhesion
Cellular Component	proteinaceous extracellular matrix

Links to other databases

Entrez Gene	395798
Ensembl Gene	ENSGALG00000006725
KEGG	gga:395798

Entry 1

GEISHA Id	ACAN.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	GACCATCTGCTTTTCCTCCAGC
Reverse cDNA Template Primer	ATTAACCCTCACTAAAGGAGACCTCACCACTTCCATCAACAC	cDNA Template Length	960
Forward cDNA Template Probe	show CCCAGAAGGTAAGGCCGGCCTCACGNTCCACCGGGGGGCCGGCCTCACCCTCGGGGGGTGGCCTCCAGAATGGGTTCCC CACTGTATGTCCAGNTCCGGGAGGGAAACCCGCGTGAGCTCAGGCACCCCAAAAGGCTCTCCACTGAGTNTCAGGCAGN CCAGAATGTTCTCCACTGAGCTCAGTCACCCCGGAATGCTCNCCANTGACACTCAGGCACCTCAAAAGGCTCTCCACTG AGCCCAGGCACCCCNGAATGCTCCCCACTGAGCTCGGGCACCCCGGATTGCTCCCCACTGGTTTCAGCTCCCNAGGGCA GCNCTCTNGCCCCACTGCTGTCCCACTCCGCAGACGGAAACCCTGACAGCTCTTCTTCACCACTGACTCCAATTGATCC TTTTCCCTCCTCTTGCCGTCCCGGTGCTGCCGTTACAACCTCCACCAAAGTGGAATCCACGAGGGAGATGGTGGGAAAA CCANAGGCGAGCCCACTTTCCTCTCCAGATGGCAGGCCACTGATAAGCTCANTGCCAGAGATTTCTCCACTAAATCCAN AATGCANACCACTGCTTTCANCTCCANATGGCATTCCACTAACTTCTGGTATCCTCNAAACANACACCGTTACCTCTTC CTCTGCANAAGGNAANCCNCTGATATCAACAATGCCANAAGGNAACCCGCTCANATCCCCTGANGGAAGGCCACTTTCT CCANGTACA

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 7

stage 7

stage 9

stage 9

Blood Islands
Extraembryonic Mesoderm
Forebrain
Head Mesenchyme
Heart
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Sinus Venosus
Somites
Unlabeled

No expression through stage 7

13-18

stage 13

Ear/Otic Placode
Forebrain
Foregut
Heart
Hindbrain
Intermediate Mesoderm
Midbrain
Neural Plate/Tube
Somatic Mesoderm

19-24

stage 19

stage 19

stage 19

stage 23

stage 24

stage 24

Cranial Ganglia
Ear/Otic Placode
Head Mesenchyme
Heart
Nephric Ducts
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Somites
Wing AER

25-26

stage 26

stage 26

stage 26

stage 26

stage 26

stage 26

stage 26

stage 26

stage 26

Cranial Ganglia
Foregut
Head Mesenchyme
Heart
Hindbrain
Isthmus/MHB
Leg Bones
Leg Mesenchyme
Neural Plate/Tube
Notochord
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Vertebrae
Wing Bones
Wing Mesenchyme

atrio-ventricular cushion
cardiac cushion

Entry 2

GEISHA Id	aggrecan.zhao.2007	Data Source	Publication
Complete cDNA Template Probe	show CTTACTCTTCAAGCCTGCTGCTGCTGCCACTGCCTGAAAGGACCTGAAATACCACACAGGGAATTGTGATTTCTTCTGG GGAACTGGGAAAAAAAAAAAAAAAAAAGGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGA AGTGGCAAGCTCTTTCCGTCTTGAGCACCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAG CACTGCACTGAACTGTTAAAGGTAAACTATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCT GCCTCCGCAGAGCTCTCAGACAGTAGCGATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGG GAAGCTCCCTGAACATCCCCTGCTATTTCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAA ATGGAGCAAGCTTTCCAATGGAACAGAGATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTAC AGAGAGGTGATCTCCTTGCCCAATTACCCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACC ACACTGGGATTTATCGCTGTGAAGTGATGTATGGGATTGAGGACAGACAATACACCATAGAGGTCCTGGTGAAAGGCGT CGTGTTCCACTACAGAGCAATCTCCACAAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGT GCTGTCATTGCCACCCCTGAGCAGCTGCAGGCTGCTTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTG ACCAGACTGTCAGGTACCCCATCCATCTGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAAC CTACGGTGTCCGTGAGACAGATGAAACCTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCC ACCTCCCCCGAGAAGTTCACCTTCCAGGAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCG AGCTGTACTTGGCCTGGAAGGATGGCATGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGTTACCCCAT TTCCAGAGCACGGCCCAATTGTGGAGGGAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGG TACCCTCACCCCAGCTCACGCTACGATGCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCA CTGACGAGGTTGGGACCGAGCTGGGCAGTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCC ACGCAATGTCACAGAAGAGGAGGCCCGTGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACATCCACCGCCACTGAG CTGTATGAGGCCTTCACCGTCCTGCCTGACCTGTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGA ACGTGACCAGAGAGGAGATCACAGGGATATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCAC CACCGGAATGGCAGAGGTGAGCTCAGTGGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCA TTCACCATAGAAGATCATCTCGTGCAAGTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCA CTGGTGTGGTGTTCCACTACCGTGCTGCCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGA GAACAATGCCGTTATTGCCACTCCCGAGCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGG CTGCGGGACCAGACGGTCAGGTATCCCATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTG TGCGGTCATACGGCATGCGCCCGGCCTCAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTT TTTTGCCACCCAGCCAGAGCAGTTCACCTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCT GCTGGGCAACTCCACGCTGCCTGGAAGCAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGT ACCCCATTGTGCGCCCCCGACCTGCCTGCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGAC GGGCTTCCCTGACCCTCTGTCACGGCATCACGCTTTCTGCTTCAGAGCTCTGCCATCTGTAGTGGAGGAGGGGGTGACC TCACTCTTTGAAGAAGAGGTGATGGTAACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTG TGGAGACAGAGCTTTCCTCTGAGCCTGAGAGTCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCT CTCAGCGAGACCATCTGCTTTTCCTCCAGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTG TCCGGAGAGTTCCCTGAGTCTGGAGAGCACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAG AACCAACTTCCGTAGGTTTTGAACTGAGTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCA GAGCAGTGGCTTTGTACCTGGAGAAAGTGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATC AGCGGCTTGCCTTCTGCAGAGGAAGAGGTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAG CTGAAAGCAGTGGTCTGCATTCTGGATTTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGA GGAAAGTGGGCTCGCCTCTGGTTTTCCCACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCG GGACGGCAAGAGGAGGGAAAAGGATCAATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGG ACAGCAGTGGGGCCAGAGGGCTGCCCTCGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGA GCATTCCGGGGTGCCTGGGCTCAGTGGAGAGGCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAG CTCAGTGGAGAACATTCTGGGCTGCCTGAGCTCAGTGGTGTGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCG GACTGGACATCAGTGGGGAACCATCTGGAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGT TGATGGAAGTGGTGAGGTCTCAGGCGTTACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCCGTCAGTTGCAGAA GCAGAAGCAAAAGAAATTCTAGAGATCAGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATG TCAGCGGTCAGCCTTCGGGACACATAGGCTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAGGCGG AGCGGTTGAGAGCAGTGGAGAAGCCTCTGGGGTTGAAGTCACCAGTGGCCTCGCGTCTGGAGAGGAAAGTGGGCTCACC TCAGGCTTTCCCACCGTGTCTCTCGTGGATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTTG GAGAAGGACCATCTGGGATGATAGAAATCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAGGGGTCTGGAGC TGTGCAGTCTAGTGGGCTTCCTTCAGGAACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGAC ATTTCTGGAGCCACAGATCTAAGCGGACAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAG TCACTTTAGTCACATCCGATTTAGTAGAAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGT GACGTTTCCCTATGTCTTTGGGCCAAGTGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGT GGTATAGAAACATCAACAGCTTATGAAATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAG ATCAAGAAATCAGTGGGGAAGCATCTGCATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGA AACATCTGCATACCCTGAGATTAGCACAGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAA ATTAGCACAGAAACATCCACAATACAAGAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCA CCTTTCAAGAAATCAGTGGGGAAACGTCCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGG CGAAACGTCTGCGTTTGCTGAGATTACCATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCC GAAATTAGCATAGAAACATCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCTGAAATTAGCATAGAAACAT CCACAGTCCATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCG GGGTGAAACATCTGCGTTCCCTGAGATTACCACAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTT CCTGAAATTAGCATAGAAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAA CATCCACGAGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCATAGAGACATCCACTGTCCATGAAAC CAGTGGGGAAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCC TACCCTGAGGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAG AGACATCCACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGGATAGAGACATCCACAGCCCACGA AGGCAGTGGGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCC GGTGCTCCTGAGAAGGAAACTCCCGACACAACATCACATCTGATCACAGGCGTTTCAGGGGAAACCTCTGTCCCAGATG CTGTAATCAGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGAACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGA GCCCTCCACTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCT ACTGCTGCCCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACTACAGAAGACACTGATGAGTGCCACT CAAGCCCCTGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGG GGACCTGTGTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAA GAGAGGGAGACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGG AACAAGAATTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCG CTGGTCTGATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTTCGCGGGCGAGGAC TGCGTTGTGATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGA AGGGAACAGTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGAT CAACTCCCTGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGG CACTGGGAGGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACACCGGCTATACAAGAGGAGCCCCCGGAGCC GGTTGAGACCCGGTGTCGTGCACAGACCCACCCATTAGAG
Citation	Zhao B, Etter L, Hinton RB Jr, Benson DW. BMP and FGF regulatory pathways in semilunar valve precursor cells. Dev Dyn. 2007 Apr;236(4):971-80.
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	Authors state: "A plasmid for the aggrecan probe was generously provided by Drs. J. Lincoln and K. Yutzey" We have linked to the Yutzey chick aggrecan cDNA in genbank, Acc.# U78555.

Stage

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Location (click to highlight)

Comments (click to highlight)

25-30

stage 30

31-37

stage 37

Entry 3

GEISHA Id	Aggrecan.Shelton.2007	Data Source	Publication
Complete cDNA Template Probe	show AAAAAAAAAAAAAGGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTT TCCGTCTTGAGCACCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACT GTTAAAGGTAAACTATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCT CTCAGACAGTAGCGATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAAC ATCCCCTGCTATTTCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTT CCAATGGAACAGAGATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTC CTTGCCCAATTACCCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTAT CGCTGTGAAGTGATGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACA GAGCAATCTCCACAAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCAC CCCTGAGCAGCTGCAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGG TACCCCATCCATCTGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTG AGACAGATGAAACCTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAA GTTCACCTTCCAGGAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCC TGGAAGGATGGCATGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGC CCAATTGTGGAGGGAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAG CTCACGCTACGATGCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGG ACTGAGCTGGGCAGTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAG AAGAGGAGGCCCGTGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTT CACCGTCCTGCCTGACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAG GAGATCACAGGGATATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAG AGGTGAGCTCAGTGGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGA TCATCTCGTGCAAGTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTC CACTACCGTGCTGCCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTA TTGCCACTCCCGAGCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGAC GGTCAGGTATCCCATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGC ATGCGCCCGGCCTCAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGC CAGAGCAGTTCACCTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCA CGCTGCCTGGAAGCAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGC CCCCGACCTGCCTGCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACC CTCTGTCACGGCATCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGA AGAGGTGATGGTAACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTT TCCTCTGAGCCTGAGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCAT CTGCTTTTCCTCCAGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCC TGAGTCTGGAGAGCACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTA GGTTTTGAACTGAGTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTG TACCTGGAGAAAGTGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTC TGCAGAGGAAGAGGTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGT CTGCATTCTGGATTTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCG CCTCTGGTTTTCCCACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGA GGGAAAAGGATCAATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCC AGAGGGCTGCCCTCGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGC CTGGGCTCAGTGGAGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCA TTCTGGGCTTCCTGAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGT GGGGAACCATCTGGAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTG AGGTCTCAGGCGTTACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGA AATTCTAGAGATCAGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCT TCGGGACACATAGACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCA GTGGAGAAGCCTCTGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCAC CGTGTCTCTCGTGGATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCT GGGATGATAGAAATCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTG GGCTTCCTTCAGGAACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCAC AGATCTAAGCGGACAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACA TCCGATTTAGTAGAAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATG TCTTTGGGCCAAGTGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATC AGCAGCTTATGAAATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGT GGGGAAGCATCTGCATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACC CTGAGATTAGCACAGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAAC ATCCACAATACAAGAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATC AGTGGGGAAACGTCCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGT TTCCCGAGATTACCATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGA AACATCCACAGTCCATGAAATCATGGAGAAACATCTGCATTTCCTGAAATTAGCATAGCAACTTCCACCGTCCGTGAAA TCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAACATCTGC ATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGGAAGCGTCTGCCTTTCCTGAAATTAGCATA GAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGAGGTTAGCATAGAGGCATCCACAACTCAAG AAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCCACAAGTCAGGAAGCCCGCGGTGAAACATC TGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTGGGGAAACTCCTGGGCTGCCTGCTGTTAGC ACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCCTGAGAAGGAAACTCCCGACACAACATCAC ATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATCAGTACCAGTGCTCCAGATGTTGAACTAGC GCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCACTCCTGCGGCATCTGGACAAGAGACAGAA ACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGCCCTGCATCCAGCCTCCCAAGAAGCAGTAG ATGCACTGGGACCCACGACAGAAGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCA CTTTGAAGAGAGGGAGACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACT CCAGAGGAACAAGAATTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATG ATTTCCGCTGGTCTGATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGG CGAGGACTGCGTTGTGATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACG TGCAAGAAGGGAACAGTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCT ATGAGATCAACTCCCTGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACC CAACGGGCACTGGGAGGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCC CGGAGCCGGTTGAGACCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAG AGATTTTTACGGAGCACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGC
Citation	Shelton EL, Yutzey KE. Tbx20 regulation of endocardial cushion cell proliferation and extrcellular matrix gene epression. Dev Biol. 2007 Feb 1;302(1):267-80.
Copyright	Reprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
Comments	The chicken aggrecan sequence (GenBank accession number U78555) was amplified from HH stage 34 wing cDNA using the previously reported primers 5′-CTGCGTTCCCTGAGATTAC-3′ and 5′-TTGCCAGGTCGATCTCAC-3′. We were unable to determine the probe sequence using this information. The sequence listed is U78555.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

25-30

stage 25

31-34

stage 34

Entry 4

GEISHA Id	AGC.Domowicz.2008	Data Source	Publication
Complete cDNA Template Probe	show AAAAAAAAAAAAAGGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTT TCCGTCTTGAGCACCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACT GTTAAAGGTAAACTATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCT CTCAGACAGTAGCGATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAAC ATCCCCTGCTATTTCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTT CCAATGGAACAGAGATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTC CTTGCCCAATTACCCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTAT CGCTGTGAAGTGATGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACA GAGCAATCTCCACAAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCAC CCCTGAGCAGCTGCAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGG TACCCCATCCATCTGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTG AGACAGATGAAACCTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAA GTTCACCTTCCAGGAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCC TGGAAGGATGGCATGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGC CCAATTGTGGAGGGAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAG CTCACGCTACGATGCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGG ACTGAGCTGGGCAGTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAG AAGAGGAGGCCCGTGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTT CACCGTCCTGCCTGACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAG GAGATCACAGGGATATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAG AGGTGAGCTCAGTGGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGA TCATCTCGTGCAAGTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTC CACTACCGTGCTGCCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTA TTGCCACTCCCGAGCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGAC GGTCAGGTATCCCATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGC ATGCGCCCGGCCTCAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGC CAGAGCAGTTCACCTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCA CGCTGCCTGGAAGCAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGC CCCCGACCTGCCTGCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACC CTCTGTCACGGCATCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGA AGAGGTGATGGTAACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTT TCCTCTGAGCCTGAGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCAT CTGCTTTTCCTCCAGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCC TGAGTCTGGAGAGCACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTA GGTTTTGAACTGAGTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTG TACCTGGAGAAAGTGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTC TGCAGAGGAAGAGGTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGT CTGCATTCTGGATTTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCG CCTCTGGTTTTCCCACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGA GGGAAAAGGATCAATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCC AGAGGGCTGCCCTCGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGC CTGGGCTCAGTGGAGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCA TTCTGGGCTTCCTGAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGT GGGGAACCATCTGGAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTG AGGTCTCAGGCGTTACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGA AATTCTAGAGATCAGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCT TCGGGACACATAGACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCA GTGGAGAAGCCTCTGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCAC CGTGTCTCTCGTGGATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCT GGGATGATAGAAATCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTG GGCTTCCTTCAGGAACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCAC AGATCTAAGCGGACAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACA TCCGATTTAGTAGAAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATG TCTTTGGGCCAAGTGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATC AGCAGCTTATGAAATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGT GGGGAAGCATCTGCATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACC CTGAGATTAGCACAGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAAC ATCCACAATACAAGAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATC AGTGGGGAAACGTCCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGT TTCCCGAGATTACCATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGA AACATCCACAGTCCATGAAATCATGGAGAAACATCTGCATTTCCTGAAATTAGCATAGCAACTTCCACCGTCCGTGAAA TCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAACATCTGC ATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGGAAGCGTCTGCCTTTCCTGAAATTAGCATA GAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGAGGTTAGCATAGAGGCATCCACAACTCAAG AAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCCACAAGTCAGGAAGCCCGCGGTGAAACATC TGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTGGGGAAACTCCTGGGCTGCCTGCTGTTAGC ACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCCTGAGAAGGAAACTCCCGACACAACATCAC ATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATCAGTACCAGTGCTCCAGATGTTGAACTAGC GCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCACTCCTGCGGCATCTGGACAAGAGACAGAA ACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGCCCTGCATCCAGCCTCCCAAGAAGCAGTAG ATGCACTGGGACCCACGACAGAAGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCA CTTTGAAGAGAGGGAGACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACT CCAGAGGAACAAGAATTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATG ATTTCCGCTGGTCTGATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGG CGAGGACTGCGTTGTGATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACG TGCAAGAAGGGAACAGTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCT ATGAGATCAACTCCCTGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACC CAACGGGCACTGGGAGGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCC CGGAGCCGGTTGAGACCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAG AGATTTTTACGGAGCACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGC
Citation	Domowicz MS, Sanders TA, Ragsdale CW, Schwartz NB. Aggrecan is expressed by embryonic brain glia and regulates astrocyte development. Dev Biol. 2008 Mar 1;315(1):114-24. Epub 2008 Jan 22.
Copyright	Copyright © 2008 Published by Elsevier Inc.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc# XM_001232949 ).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

31-38

stage 31

stage 34

stage 34

stage 34

stage 34

stage 34

stage 34

stage 38

stage 38

Diencephalon
Forebrain
Hindbrain
Isthmus/MHB
Midbrain
Rhombomeres
Telencephalon

Entry 5

GEISHA Id	AGGRECAN.Thompson.2010b	Data Source	Publication
Complete cDNA Template Probe	show GGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTTTCCGTCTTGAGCA CCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACTGTTAAAGGTAAAC TATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCTCTCAGACAGTAGC GATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAACATCCCCTGCTATT TCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTTCCAATGGAACAGA GATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTCCTTGCCCAATTAC CCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTATCGCTGTGAAGTGA TGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACAGAGCAATCTCCAC AAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCACCCCTGAGCAGCTG CAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGGTACCCCATCCATC TGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTGAGACAGATGAAAC CTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAAGTTCACCTTCCAG GAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCCTGGAAGGATGGCA TGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGCCCAATTGTGGAGG GAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAGCTCACGCTACGAT GCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGGACTGAGCTGGGCA GTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAGAAGAGGAGGCCCG TGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTTCACCGTCCTGCCT GACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAGGAGATCACAGGGA TATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAGAGGTGAGCTCAGT GGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGATCATCTCGTGCAA GTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTCCACTACCGTGCTG CCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTATTGCCACTCCCGA GCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGACGGTCAGGTATCCC ATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGCATGCGCCCGGCCT CAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGCCAGAGCAGTTCAC CTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCACGCTGCCTGGAAG CAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGCCCCCGACCTGCCT GCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACCCTCTGTCACGGCA TCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGAAGAGGTGATGGTA ACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTTTCCTCTGAGCCTG AGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCATCTGCTTTTCCTCC AGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCCTGAGTCTGGAGAG CACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTAGGTTTTGAACTGA GTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTGTACCTGGAGAAAG TGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTCTGCAGAGGAAGAG GTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGTCTGCATTCTGGAT TTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCGCCTCTGGTTTTCC CACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGAGGGAAAAGGATCA ATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCCAGAGGGCTGCCCT CGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGCCTGGGCTCAGTGG AGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCATTCTGGGCTTCCT GAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGTGGGGAACCATCTG GAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTGAGGTCTCAGGCGT TACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGAAATTCTAGAGATC AGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCTTCGGGACACATAG ACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCAGTGGAGAAGCCTC TGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCACCGTGTCTCTCGTG GATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCTGGGATGATAGAAA TCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTGGGCTTCCTTCAGG AACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCACAGATCTAAGCGGA CAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACATCCGATTTAGTAG AAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATGTCTTTGGGCCAAG TGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATCAGCAGCTTATGAA ATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGTGGGGAAGCATCTG CATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACCCTGAGATTAGCAC AGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAACATCCACAATACAA GAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATCAGTGGGGAAACGT CCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGTTTCCCGAGATTAC CATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGAAACATCCACAGTC CATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAA CATCTGCGTTCCCTGAGATTACCATAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTTCCTGAAAT TAGCATAGCAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACG AGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGG AAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGA GGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCC ACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTG GGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCC TGAGAAGGAAACTCCCGACACAACATCACATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATC AGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCA CTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGC CCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACGACAGAAGACACTGATGAGTGCCACTCAAGCCCC TGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGGGGACCTGT GTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAAGAGAGGGA GACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGGAACAAGAA TTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCGCTGGTCTG ATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGGCGAGGACTGCGTTGT GATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGAAGGGAACA GTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGATCAACTCCC TGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGGCACTGGGA GGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCCCGGAGCCGGTTGAGA CCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAGAGATTTTTACGGAGC ACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGCTTTTTTGTCATATAAGG
Citation	H. Thompson, J.S. Griffiths, G. Jeffery, I.M. McGonnell. The retinal pigment epithelium of the eye regulates the development of scleral cartilage. Dev Biol. 2010 November 1; 347(1-13): 40-52.
Copyright	2010
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204955.2 ).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

25-29

stage 29

stage 29

stage 29

stage 29

Entry 6

GEISHA Id	AGGRECAN.Pirok.2005	Data Source	Publication
Complete cDNA Template Probe	show GGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTTTCCGTCTTGAGCA CCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACTGTTAAAGGTAAAC TATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCTCTCAGACAGTAGC GATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAACATCCCCTGCTATT TCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTTCCAATGGAACAGA GATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTCCTTGCCCAATTAC CCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTATCGCTGTGAAGTGA TGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACAGAGCAATCTCCAC AAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCACCCCTGAGCAGCTG CAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGGTACCCCATCCATC TGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTGAGACAGATGAAAC CTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAAGTTCACCTTCCAG GAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCCTGGAAGGATGGCA TGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGCCCAATTGTGGAGG GAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAGCTCACGCTACGAT GCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGGACTGAGCTGGGCA GTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAGAAGAGGAGGCCCG TGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTTCACCGTCCTGCCT GACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAGGAGATCACAGGGA TATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAGAGGTGAGCTCAGT GGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGATCATCTCGTGCAA GTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTCCACTACCGTGCTG CCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTATTGCCACTCCCGA GCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGACGGTCAGGTATCCC ATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGCATGCGCCCGGCCT CAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGCCAGAGCAGTTCAC CTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCACGCTGCCTGGAAG CAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGCCCCCGACCTGCCT GCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACCCTCTGTCACGGCA TCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGAAGAGGTGATGGTA ACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTTTCCTCTGAGCCTG AGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCATCTGCTTTTCCTCC AGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCCTGAGTCTGGAGAG CACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTAGGTTTTGAACTGA GTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTGTACCTGGAGAAAG TGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTCTGCAGAGGAAGAG GTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGTCTGCATTCTGGAT TTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCGCCTCTGGTTTTCC CACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGAGGGAAAAGGATCA ATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCCAGAGGGCTGCCCT CGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGCCTGGGCTCAGTGG AGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCATTCTGGGCTTCCT GAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGTGGGGAACCATCTG GAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTGAGGTCTCAGGCGT TACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGAAATTCTAGAGATC AGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCTTCGGGACACATAG ACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCAGTGGAGAAGCCTC TGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCACCGTGTCTCTCGTG GATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCTGGGATGATAGAAA TCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTGGGCTTCCTTCAGG AACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCACAGATCTAAGCGGA CAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACATCCGATTTAGTAG AAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATGTCTTTGGGCCAAG TGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATCAGCAGCTTATGAA ATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGTGGGGAAGCATCTG CATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACCCTGAGATTAGCAC AGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAACATCCACAATACAA GAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATCAGTGGGGAAACGT CCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGTTTCCCGAGATTAC CATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGAAACATCCACAGTC CATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAA CATCTGCGTTCCCTGAGATTACCATAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTTCCTGAAAT TAGCATAGCAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACG AGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGG AAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGA GGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCC ACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTG GGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCC TGAGAAGGAAACTCCCGACACAACATCACATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATC AGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCA CTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGC CCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACGACAGAAGACACTGATGAGTGCCACTCAAGCCCC TGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGGGGACCTGT GTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAAGAGAGGGA GACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGGAACAAGAA TTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCGCTGGTCTG ATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGGCGAGGACTGCGTTGT GATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGAAGGGAACA GTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGATCAACTCCC TGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGGCACTGGGA GGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCCCGGAGCCGGTTGAGA CCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAGAGATTTTTACGGAGC ACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGCTTTTTTGTCATATAAGG
Citation	Pirok EW 3rd, Domowicz MS, Henry J, Wang Y, Santore M, Mueller MM, Schwartz NB. APBP-1, a DNA/RNA-binding protein, interacts with the chick aggrecan regulatory region. J Biol Chem. 2005 Oct 21;280(42):35606-16. Epub 2005 Aug 12.
Copyright	Copyright © 2012 by American Society for Biochemistry and Molecular Biology

Stage

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31-38

stage 38

stage 38

Entry 7

GEISHA Id	ACAN.Yakushiji-Kaminatsui.2018	Data Source	Publication
Complete cDNA Template Probe	show GGCAGGAAAAGTCCTCTGGAGATAGCAAAGAAGACATACAGCAACAGCAAGAAGTGGCAAGCTCTTTCCGTCTTGAGCA CCGAAAAACACCTACTTTCTCTGCCAGGTGTATGGGACTTAGATTCTCCGAGCACTGCACTGAACTGTTAAAGGTAAAC TATGACCACTCTACTACTAGTGTTTGTGTGTTTGCAAGCCATCACCACAGCTGCCTCCGCAGAGCTCTCAGACAGTAGC GATGGCCTGGAAGTGAAGATACCTGAGCAGTCTCCCCTGCGTGTTGTCCTGGGAAGCTCCCTGAACATCCCCTGCTATT TCAACATCCCAGAGGAAGAGGACACCAATGCTCTGCTGACCCCCCGGATCAAATGGAGCAAGCTTTCCAATGGAACAGA GATTGTCTTACTAGTGGCCACCGGTGGGAAGATCCGGCTCAATGCAGAGTACAGAGAGGTGATCTCCTTGCCCAATTAC CCTGCCATCCCCACTGATGCCACCTTGGAAATCAAGGCGCTGAGATCCAACCACACTGGGATTTATCGCTGTGAAGTGA TGTATGGGATTGAGGACAGACAAGACACCATAGAGGTCCTGGTGAAAGGCGTCGTGTTCCACTACAGAGCAATCTCCAC AAGGTACACTTTGAACTTCGAGAGGGCAAAGCAGGCCTGTATCCAGAACAGTGCTGTCATTGCCACCCCTGAGCAGCTG CAGGCTGCCTACGAGGATGGGTACGAGCAGTGCGATGCCGGCTGGCTGGCTGATCAGACTGTCAGGTACCCCATCCATC TGCCCCGGGAGCGCTGCTACGGTGACAAGGATGAGTTTCCAGGAGTGAGAACCTACGGTGTCCGTGAGACAGATGAAAC CTATGATGTTTACTGCTATGCAGAGCAAATGCAAGGCAAAGTCTTCTACGCCACCTCCCCCGAGAAGTTCACCTTCCAG GAAGCTTTTGACAAATGCCACAGCTTGGGAGCCCGCCTGGCCACCACGGGCGAGCTGTACTTGGCCTGGAAGGATGGCA TGGACATGTGCAGTGCGGGCTGGCTGGCTGACCGCAGCGTTCGCTACCCCATTTCCAGAGCACGGCCCAATTGTGGAGG GAACCTGGTGGGCGTGCGGACCGTTTACCTGAACCCTGCCAACCAGACAGGGTACCCTCACCCCAGCTCACGCTACGAT GCCATCTGTTACAGTGGTGATGACTTCGAGGCTCTGGTCCCAGGGCTGTTCACTGACGAGGTTGGGACTGAGCTGGGCA GTGCTTTTACCATACAGACCGTCACACAGACTGAGGTGGAGCTGCCCCTGCCACGCAATGTCACAGAAGAGGAGGCCCG TGGCAGCATCGCTACCCTGGAGCCCATGGAGATCACAGCCACCGCCACTGAGCTGTATGAGGCCTTCACCGTCCTGCCT GACCTCTTTGCCACCAGTGTCACAGTAGAGACAGCTTCCCCAAGGGAAGAGAACGTGACCAGAGAGGAGATCACAGGGA TATGGGCTGTGCCTGAAGAGGTCACTACATCGGTCTCAGGCACTGCTTTCACCACCGGAATGGCAGAGGTGAGCTCAGT GGAAGAGGCCATAGCAGTGACTGCCACACCAGGACTGGAGTCTGCCTCTCCATTCACCATAGAAGATCATCTCGTGCAA GTGACAGCAGCCCCTGATGTTGCCCTCCTCCCCAGGCAGCCCATTTCCCCCACTGGTGTGGTGTTCCACTACCGTGCTG CCACCAGCAGATACGCCTTCTCCTTCATCCAAGCCCAGCAGGCCTGCCTGGAGAACAATGCCGTTATTGCCACTCCCGA GCAGCTCCAGGCTGCCTACGAGGCTGGCTTTGATCAGTGCGATGCCGGCTGGCTGCGGGACCAGACGGTCAGGTATCCC ATTGTGAATCCCCGCAGCAACTGTGTAGGAGACAAAGAGAGCTCCCCAGGTGTGCGGTCATACGGCATGCGCCCGGCCT CAGAGACCTACGATGTGTACTGTTACATCGACAGGCTAAAGGGTGAGGTGTTTTTTGCCACCCAGCCAGAGCAGTTCAC CTTCCAAGAAGCCCAGCTGTACTGTGAAAGCCAAAATGCCACGCTGGCCTCTGCTGGGCAACTCCACGCTGCCTGGAAG CAGGGCCTGGATAGGTGCTACCCTGGGTGGCTGGCCGACGGCAGCTTGCGGTACCCCATTGTGAGCCCCCGACCTGCCT GCGGGGGGGATGCACCTGGTGTGAGGACCATCTACCAGCACCACAACCAGACGGGCTTTCCTGACCCTCTGTCACGGCA TCACGCTTTCTGCTTCAGAGCTCTGCCATCCGTAGTGGAGGAGGGGGTGACCTCACTCTTTGAAGAAGAGGTGATGGTA ACCCAACTGATCCCTGGAGTGGAAGGAATACCTTCTGGGGAGGAAACAACTGTGGAGACAGAGCTTTCCTCTGAGCCTG AGAATCAGACAGCCCAGGGAACGGAGGTCTTCCCAACTGACGTATCACTGCTCTCAGCGAGACCATCTGCTTTTCCTCC AGCTACTGTAATACCAGAGGAAACAAGTACCAATGCTTCCATCCCCGAAGTGTCCGGAGAGTTCCCTGAGTCTGGAGAG CACCCAACCAGTGGCGAACCTTCAGCATCTGGAGCCCCAGACACGAGTGGAGAACCAACTTCCGTAGGTTTTGAACTGA GTGGAGAGCAATCCGGGATTGGAGAAAGTGGATTACCATCTGTAGACCTGCAGAGCAGTGGCTTTGTACCTGGAGAAAG TGGCCTTCCCTCAGGGGATGTGAGCGGGTTGCCTTCTGGCATTGTTGATATCAGCGGCTTGCCTTCTGCAGAGGAAGAG GTAACGGTGTCTGTTTCGAGGATACCAGAAGTTAGTGGAATGCCATCTGGAGCTGAAAGCAGTGGTCTGCATTCTGGAT TTAGTGGAGAAATCTCTGGCACTGAGCTTATCAGTGGCCTGCCATCTGGAGAGGAAAGTGGGCTCGCCTCTGGTTTTCC CACCATCTCCCTCGTGGATTCCACTTTGGTGGAGGTTGTAACGGCAGCACCGGGACGGCAAGAGGAGGGAAAAGGATCA ATTGGAGTCAGTGGTGAAGAAGAGCTGTCAGGGTTTCCGTCTGCAGAGTGGGACAGCAGTGGGGCCAGAGGGCTGCCCT CGGGAGCTGAAACCAGTGGGGAGCAATCCGGGGTGCCCGAGCTCAGTGGGGAGCATTCCGGGGTGCCTGGGCTCAGTGG AGAGCCTTTTGAGGTGCCTGAGCTCAGCGGGGAGCATTCCGGGGTGACTGAGCTCAGTGGGGAGCATTCTGGGCTTCCT GAGCTCAGTGGAGAGCCTTTTGGGGTGCCTGAGCTCAGCGGGTTTCCCTCCGGACTGGACATCAGTGGGGAACCATCTG GAGCACCCGAGGTGAGCGGCCCGGTGGACGTGAGCGGCCTTACCTCTGGTGTTGATGGAAGTGGTGAGGTCTCAGGCGT TACCTTTATAAGCACCAGCCTGCAAGAAGTGACAACCCAGTCAGTTGCAGAAGCAGAAGCAAAAGAAATTCTAGAGATC AGTGGACTGCCTTCAGGAGAGACATCAGGCATGGTGTCTGGGAGCTTAGATGTCAGCGGTCAGCCTTCGGGACACATAG ACTTTGGTGGGAGCGCTTCTGGAGTGCTGGAGATGAGCGGATTTCCAAGCGGAGCGGTTGAGAGCAGTGGAGAAGCCTC TGGGGTTGAAGTCACCAGTGTCCTCGCGTCTGGAGAGGAAAGTGGGCTCACCTCAGGCTTTCCCACCGTGTCTCTCGTG GATACCACGTTGGTAGAAGTTGTAACGCAGACATCAGTTGCTCAAGAGGTGGGAGAAGGACCATCTGGGATGATAGAAA TCAGTGGATTTCTTTCTGGAGACAGAGGAGTATCTGGAGAAGGGTCTGGAGCTGTGCAGTCTAGTGGGCTTCCTTCAGG AACAGGAGACTTCAGCGGAGAGCCATCCGGGATCCCGTATTTCAGCGGAGACATTTCTGGAGCCACAGATCTAAGCGGA CAACCTTCCGCAGTGACTGATATTAGTGGGGAGGACTCGGGACTTCCAGAAGTCACTTTAGTCACATCCGATTTAGTAG AAGTTGTGACAAGGCCAACAGTTTCACAGGAGCTGGGTGGGGAAACAGCTGTGACGTTTCCCTATGTCTTTGGGCCAAG TGGTGAGGGCTCTGCATCTGGAGACCTGAGTGGGGGAGCATCTGCAGAAGGTGGTATAGAAACATCAGCAGCTTATGAA ATCAGTGGTGAGAGCTCTGCCTTCCCTGAAACGAGTATAGAAACATCCACAGATCAAGAAATCAGTGGGGAAGCATCTG CATACCCTGAGATTAGCGTAGAAACATCCACGCATCTGGAAACCAGTGGGGAAACATCTGCATACCCTGAGATTAGCAC AGAGACGTCCACCATTCAGGAAGTTAGTGGGGAAACGTCTGCCTTTCCTGAAATTAGCACAGAAACATCCACAATACAA GAGATCAGTGGGGAAACATCCGCATTTCCTGAAATTAGAATAGAAACATCCACCTTTCAAGAAATCAGTGGGGAAACGT CCGCATTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGCGGCGAAACGTCTGCGTTTCCCGAGATTAC CATAGAAGCCTCCACAGTCCATGAAACCAGTGGAGAAACATCTGCCTTTCCCGAAATTAGCATAGAAACATCCACAGTC CATGAAATCAGTGGGGAAAGTTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACGAGTCAAGAAGCCCGGGGTGAAA CATCTGCGTTCCCTGAGATTACCATAGAAGCCTCCACCATTCAAGAGATCAGTGGAGAAACATCTGCATTTCCTGAAAT TAGCATAGCAACTTCCACCGTCCGTGAAATCAGCGGCGAAACGTCTGCCTTTCCTGAAATTAGAATAGAAACATCCACG AGTCAAGAAGCCCGGGGTGAAACATCTGCATTGCCTGAGATTACCGTAGAGACATCCACTGTCCATGAAACCAGTGGGG AAGCGTCTGCCTTTCCTGAAATTAGCATAGAAACTTCCACAAGACAAGAAGCCAGGGGTGAAGCATCCGCCTACCCTGA GGTTAGCATAGAGGCATCCACAACTCAAGAAGTAAGTGGGGAAAGTTCTGCCTTCCCTGAAATTAGCGTAGAGACATCC ACAAGTCAGGAAGCCCGCGGTGAAACATCTGCCTTTCCTGAGATTGGCATAGAGACATCCACAGCCCACGAAGGCAGTG GGGAAACTCCTGGGCTGCCTGCTGTTAGCACTGACACTGCTGCCACGTCTCTGGCCAGTGGTGAGCCCTCCGGTGCTCC TGAGAAGGAAACTCCCGACACAACATCACATCTGATCACGGGCGTTTCAGGGGAAACCTCTGTCCCAGATGCTGTAATC AGTACCAGTGCTCCAGATGTTGAACTAGCGCAGGGACCCAGAAACACTGAAGAGACTCAGCTTGAAATAGAGCCCTCCA CTCCTGCGGCATCTGGACAAGAGACAGAAACAGCTGCTGTCCTCGACAATCCCCATCTGCCAGCCACTGCTACTGCTGC CCTGCATCCAGCCTCCCAAGAAGCAGTAGATGCACTGGGACCCACGACAGAAGACACTGATGAGTGCCACTCAAGCCCC TGTCTGAATGGAGCTACCTGCGTTGATGGCATCGACTCTTTCAAATGCTTATGCCTTCCCAGCTACGGAGGGGACCTGT GTGAGATCGACCTGGCAAACTGTGAGGAAGGCTGGATCAAGTTCCAGGGCCACTGCTACAGGCACTTTGAAGAGAGGGA GACGTGGATGGACGCAGAGTCCAGGTGCAGAGAACATCAAGCCCACCTGAGCAGCATCATTACTCCAGAGGAACAAGAA TTTGTGAACAGCCATGCACAAGACTATCAGTGGATCGGCCTCAGTGACAGAGCCGTGGAGAATGATTTCCGCTGGTCTG ATGGACACTCGCTGCAATTTGAGAACTGGCGGCCCAACCAACCTGACAACTTCTTCTCCGCGGGCGAGGACTGCGTTGT GATGATCTGGCATGAGCAAGGCGAATGGAACGACGTCCCCTGCAACTATCACCTGCCTTTCACGTGCAAGAAGGGAACA GTTGCCTGTGGGGACCCACCTGTAGTGGAGAACGCGCGGACCTTTGGCCGGAAGAAGGACCGCTATGAGATCAACTCCC TGGTGCGGTACCAGTGTGACCACGGCTACATCCAGCGCCACGTGCCCACCATCCGCTGCCAACCCAACGGGCACTGGGA GGAACCGCGGATATCCTGCACAAACCCCTCCAGCTACCAACGCCGGCTATACAAGAGGAGCCCCCGGAGCCGGTTGAGA CCCGGTGTCGTGCACAGACCCACCCATTAGAGCGGGGCGAGGGGTGAGCAGAGAGAGAAAAGAGAGATTTTTACGGAGC ACTTCTATTAACAGAGTCAATTTCTTCTTCTTGTTGTTGCTTTTTTGTCATATAAGG
Citation	Nayuta Yakushiji-Kaminatsui, Lucille Lopez-Delisle, Christopher Chase Bolt, Guillaume Andrey, Leonardo Beccari, Denis Duboule. Similarities and differences in the regulation of HoxD genes during chick and mouse limb development. PLoS Biol. 2018 Nov 26;16(11):e3000004. DOI: 10.1371/journal.pbio.3000004.
Copyright	Copyright © 2018 Yakushiji-Kaminatsui et al.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204955.2).

Stage

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25-28

stage 28

stage 28

all

Data from NCBI Unigene EST Profile
Unigene ID: Gga.3977

Mouse

Emage
Eurexpress	MGI:99602
MGI GXD	MGI:99602

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-100422-16, ZDB-GENE-050208-221, ZDB-GENE-100422-16

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National Institute of Health

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