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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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HGF
hepatocyte growth factor

The human orthologue of this gene is associated
with the following human disease:

Deafness, autosomal recessive 39

Gene

Official Symbol	HGF
Official Full Name	hepatocyte growth factor
CGNC ID	49562
also known as	HGF/SF, hepatocyte growth factor\|HGF alpha-chain\|hepatocyte growth factor (hepapoietin A; scatter factor)\|hepatocyte growth factor /scatter factor, Hepatocyte Growth Factor, Scatter Factor, HGF/SF protein precursor
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001030370
Polypeptide	NP_001025541
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.28385

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3082	ENSG00000019991	MIM:608265	MIM:142409
Mouse	15234	ENSMUSG00000028864	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:96079
Xenopus	100495840			999991
Zebrafish	493781, 493782	ENSDARG00000045544	ZDB-GENE-041014-2, ZDB-GENE-041014-3	ZFIN:ZDB-GENE-041014-2, ZFIN:ZDB-GENE-041014-3

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	395941
Ensembl Gene
KEGG	gga:395941

Entry 1

GEISHA Id	HGF.Noden.2006	Data Source	Publication
Complete cDNA Template Probe	show GCCGCCGGGGGGGCCGCCAGCACCATGTGGGCTACCCAACTCCTGCCAGCCTTGCTACTCCATCAGCTGCTGCTGCCTC CCATCACGATCCCTGCGGCAGAAGGTAAAGGAAAAAGGAGAAATCCTCTTCATGACTATAAAAAAACAGGCGAGTTGAT GCTCATCAAAGTAAACAAAACACTGGAAGTTAAAACCAAGCTGCTAAATACCACTGAGCAGTGTGCCAAGAGATGCAGC AGGAACAAAGGCCTTTCATTCACTTGCAAGGCCTTTGCTTATGACAGAGTTACAAAACGGTGCCATTGGTTATCCTTCA ACAGCTTGACAAATGGTGTGAGAAAGAAGCAAGACCATGCGTTTGATCTGTTTGAAAAGAAGGACTATGTCAGAAACTG TATAATTGGAAAAGGAGCTGAGTACAAAGGAACAATATCTATTACCAAGAGTGGTATTCAGTGTCAGGCCTGGAATTCC ATGATCCCCCATGAGCACAGCTTTTTGCCTTCGAGCTATCGGGGTAAAGACCTGCGGGAAAACTACTGCCGAAACCCCC GAGGGGAAGAGGGAGGGCCATGGTGTTTCACCACCAGCCCACAGATGCGCCATGAAGTCTGTGACATCCCCCTCTGCTC TGAAGTTGAATGCATGACCTGCAATGGAGAGAGTTACAGAGGACCAATGGATCATACTGAGTCAGGCAAGGAGTGTCAG CGCTGGGACCTTCAGAGACCACACAAACACAAATTTCGTCCAGAGAGATATCCTGACAAGGGCTTTGATGATAATTACT GCCGCAATCCTGATGGCAAGCTGAGACCATGGTGCTACACTCTTGACCCTAACACCCCCTGGGAGTTCTGTGCGATTAA AACATGTGATGTTGGCATTCTGAACAGCACAGAGGCAGTGGCTGAGACAACAACATGCATCCAGGGGCAGGGCGAGGGC TACCGTGGCACCGTCAACACCATATGGAGTGGGATTCAGTGCCAACGGTGGGACTCCCAATTTCCTCATCAGCACAACA TCACTCCTGAGAACTTCAAGTGCAAAGATTTGAGGGAGAACTACTGTCGAAATCCAGATGGATCTGAATCACCCTGGTG TTTTACTACTGACCCAAACATCCGGATTGGTTATTGCTCCCAGATTCCTAAGTGTGATGTATCAAATGAACAAGATTGT TATCGTGGCAATGGAAAGAGTTACATGGGGAATCTGTCCAACACAAGAATTGGACTAACTTGCTCCACATGGGACAAGA ATATTGAAGACTTACGTAGGCATATACAAATATTCAGAGAACCAGATGTTAGTAAACTGAAGAAAAACTACTGCCGCAA TCCAGATGATGATTTTCATGGTCCCTGGTGTTACACAGATGATCCTCTCATTCCCTGGGATTACTGCCCTATTTCTCGA TGTACTGGTGACACAACTCCTACTACAACAAGTTTGGATGATACTGTCATTCCTTGTGCTTCAACAAAACATTTGAGAG TTGTAAATGGAATCCCAACACAAACTAATGAAGGATGGGTGGTTAGTTTGACATACAGGAATAAGCATATCTGTGGAGG TACTCTGGTAAAGGAAGAGTGGGTTCTCACAGCAAGACAGTGTTTCCCATCTCGTTACAAAGATCTGAAAGACTACAAA GCTTGGCTCGGAGTCCATAATATCAAAGGAAAGGGAGAAGAGAAGCACAGGCAAGTTCGGAATATCTCCCAGCTGATAT ACGGTCCGGCAGGATCAGATCTGGTTTTACTAAAACTTAGCAGACCTGCGATATTGACAAATTTTGTAGAAATAATTCG ATTGCCCATTTCTGGATGTACCATACCAGAGAAGACCAGTTGCAGTGTTTTTGGATGGGGATACACTGGATTACCTAAC TATGATGGCCTTCTCCGGGTAGCAAACCTATTTATTTTGGGAAATGAGAAATGCAACCAGTATCTCAAAGGGAAGATCA CGGTAAATGAGTCAGAAATCTGTGCTGTGGCTGAAACCATTGGTGCTGGGCCTTGTGAGCGTGATTATGGTGGTCCCTT GGTTTGTGAACAAAACAGGCTAAAAATAGTAGTGGGTGTCATCGTTCCTGGCCGTGGATGTGCCATTCGAAATCGTCCT GGGATTTTTGTTCGAGTCTCATATTACTCCCGATGGATACACAAGATTATGATGACCTACAGAAAGCCCTGAAGAACTC AACAGCTTCCATTTACAGAGAGATTTTGGACAGAATAGAATTAAGATGTAATGTAAAGATCA
Citation	Noden DM, Francis-West P. The differentiation and morphogenesis of craniofacial muscles. Dev Dyn. 2006 May;235(5):1194-218. Review.
Copyright	Copyright © 2006 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (X84045).

Stage

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13-16

stage 16

Head Mesenchyme

Head Muscles

Entry 2

GEISHA Id	Sf/Hgf.Bonafede.2006	Data Source	Publication
Complete cDNA Template Probe	show GCCGCCGGGGGGGCCGCCAGCACCATGTGGGCTACCCAACTCCTGCCAGCCTTGCTACTCCATCAGCTGCTGCTGCCTC CCATCACGATCCCTGCGGCAGAAGGTAAAGGAAAAAGGAGAAATCCTCTTCATGACTATAAAAAAACAGGCGAGTTGAT GCTCATCAAAGTAAACAAAACACTGGAAGTTAAAACCAAGCTGCTAAATACCACTGAGCAGTGTGCCAAGAGATGCAGC AGGAACAAAGGCCTTTCATTCACTTGCAAGGCCTTTGCTTATGACAGAGTTACAAAACGGTGCCATTGGTTATCCTTCA ACAGCTTGACAAATGGTGTGAGAAAGAAGCAAGACCATGCGTTTGATCTGTTTGAAAAGAAGGACTATGTCAGAAACTG TATAATTGGAAAAGGAGCTGAGTACAAAGGAACAATATCTATTACCAAGAGTGGTATTCAGTGTCAGGCCTGGAATTCC ATGATCCCCCATGAGCACAGCTTTTTGCCTTCGAGCTATCGGGGTAAAGACCTGCGGGAAAACTACTGCCGAAACCCCC GAGGGGAAGAGGGAGGGCCATGGTGTTTCACCACCAGCCCACAGATGCGCCATGAAGTCTGTGACATCCCCCTCTGCTC TGAAGTTGAATGCATGACCTGCAATGGAGAGAGTTACAGAGGACCAATGGATCATACTGAGTCAGGCAAGGAGTGTCAG CGCTGGGACCTTCAGAGACCACACAAACACAAATTTCGTCCAGAGAGATATCCTGACAAGGGCTTTGATGATAATTACT GCCGCAATCCTGATGGCAAGCTGAGACCATGGTGCTACACTCTTGACCCTAACACCCCCTGGGAGTTCTGTGCGATTAA AACATGTGATGTTGGCATTCTGAACAGCACAGAGGCAGTGGCTGAGACAACAACATGCATCCAGGGGCAGGGCGAGGGC TACCGTGGCACCGTCAACACCATATGGAGTGGGATTCAGTGCCAACGGTGGGACTCCCAATTTCCTCATCAGCACAACA TCACTCCTGAGAACTTCAAGTGCAAAGATTTGAGGGAGAACTACTGTCGAAATCCAGATGGATCTGAATCACCCTGGTG TTTTACTACTGACCCAAACATCCGGATTGGTTATTGCTCCCAGATTCCTAAGTGTGATGTATCAAATGAACAAGATTGT TATCGTGGCAATGGAAAGAGTTACATGGGGAATCTGTCCAACACAAGAATTGGACTAACTTGCTCCACATGGGACAAGA ATATTGAAGACTTACGTAGGCATATACAAATATTCAGAGAACCAGATGTTAGTAAACTGAAGAAAAACTACTGCCGCAA TCCAGATGATGATTTTCATGGTCCCTGGTGTTACACAGATGATCCTCTCATTCCCTGGGATTACTGCCCTATTTCTCGA TGTACTGGTGACACAACTCCTACTACAACAAGTTTGGATGATACTGTCATTCCTTGTGCTTCAACAAAACATTTGAGAG TTGTAAATGGAATCCCAACACAAACTAATGAAGGATGGGTGGTTAGTTTGACATACAGGAATAAGCATATCTGTGGAGG TACTCTGGTAAAGGAAGAGTGGGTTCTCACAGCAAGACAGTGTTTCCCATCTCGTTACAAAGATCTGAAAGACTACAAA GCTTGGCTCGGAGTCCATAATATCAAAGGAAAGGGAGAAGAGAAGCACAGGCAAGTTCGGAATATCTCCCAGCTGATAT ACGGTCCGGCAGGATCAGATCTGGTTTTACTAAAACTTAGCAGACCTGCGATATTGACAAATTTTGTAGAAATAATTCG ATTGCCCATTTCTGGATGTACCATACCAGAGAAGACCAGTTGCAGTGTTTTTGGATGGGGATACACTGGATTACCTAAC TATGATGGCCTTCTCCGGGTAGCAAACCTATTTATTTTGGGAAATGAGAAATGCAACCAGTATCTCAAAGGGAAGATCA CGGTAAATGAGTCAGAAATCTGTGCTGTGGCTGAAACCATTGGTGCTGGGCCTTGTGAGCGTGATTATGGTGGTCCCTT GGTTTGTGAACAAAACAGGCTAAAAATAGTAGTGGGTGTCATCGTTCCTGGCCGTGGATGTGCCATTCGAAATCGTCCT GGGATTTTTGTTCGAGTCTCATATTACTCCCGATGGATACACAAGATTATGATGACCTACAGAAAGCCCTGAAGAACTC AACAGCTTCCATTTACAGAGAGATTTTGGACAGAATAGAATTAAGATGTAATGTAAAGATCA
Citation	Bonafede A, Köhler T, Rodriguez-Niedenführ M, Brand-Saberi B. BMPs restrict the position of premuscle masses in the limb buds by influencing Tcf4 expression. Dev Biol. 2006 Nov 15;299(2):330-44. Epub 2006 Jun 15.
Copyright	Copyright © 2006 Elsevier B.V. All rights reserved.
Comments	The following probes were used: Sf/Hgf (Thery, C., M.J. Sharpe, S.J. Batley, C.D. Stern and E. Gherardi, Expression of HGF/SF, HGF1/MSP, and cMet suggests new functions during early chick development, Dev. Genet. 17 (1995), pp. 90101. Their submitted clone is Acc# X84045.