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OSR1
odd-skipped related transciption factor 1| Gene | | Official Symbol | OSR1 | | Official Full Name | odd-skipped related transciption factor 1 | | CGNC ID | | | also known as | ODD, protein odd-skipped-related 1|odd-skipped homolog | | gene type | protein-coding |
| | Genomic Map | | | Sequence Information | | | Gene Expression | | | Orthology | | Entrez Gene | Ensembl Gene | Genetic Phenotypes | MOD | | Fruit Fly | | | | | | Human | | | | | | Mouse | | | | | | Xenopus | | | | | | Zebrafish | | | | |
| | Gene Ontology | | Molecular Function | | | Biological Process | | | Cellular Component | |
| | Links to other databases | |
Entry 1| GEISHA Id | Osr1.Stricker.2006 | Data Source | Publication | | Complete cDNA Template Probe | show GCGGCTCGAGCTTTGATTTTGCCAACCTCGCAGTGGCTGCCACGCAAGAGGACCACTCTAAACTGGGACAGGTGGACAG
CCAGGGCTCCCCGCCAGGGCTGGGGTCTTTGCTTGAGGTGACTAAACTCTCTCCAGAGAAGAAACCCACCCGGGGAAGG
TTACCATCCAAAACCAAGAAGGAGTTTGTGTGTAAATTCTGTGGCAGGCACTTCACCAAGTCGTACAACCTTTTGATCC
ATGAAAGAACCCACACTGATGAACGGCCCTACACATGCGACATATGCCACAAGGCCTTCAGAAGACAGGATCACCTGAG
AGACCACAGATATATCCATTCTAAAGAAAAGCCTTTTAAGTGTCAAGAATGTGGGAAAGGATTTTGCCAGTCCAGAACT
CTAGCTGTCCACAAGACACTGCACACGCAAGTAAAGGAACTGAAACCTGCCAAACTTAAGTGCTGAATCTCCGACTTCT
ATGAACTTTTCCTGCCNCTTCCCAGATTTTAGCACNNCAGAACNNCAGAACANNGAAACGAAAACTTGTCCAGGATGGG
AGCANNCAGAACTTTGGTGTTTTGAATTTTTTTGTTTGTTTGTTTGTACTTTAGAAAGAGCGAAATCTCCCCGAGAAAC
TCACTTCTTAAATCATGGATGGAAAGATTACTTGGCATTTAAAGCATACATGAATGACACAGAAAGTGCTAGATGTGTG
GCTTAGACAAACTTTATGCCAAAAGGTGGTGCTCACGTGNTGGACAGAAATCTCCTTAAAAACCAAAAAAAACCAAAAA
AACCA | | Citation | Stricker S, Brieske N, Haupt J, Mundlos S. Comparative expression pattern of Odd-skipped related genes Osr1 and Osr2 in chick embryonic development. Gene Expr Patterns. 2006 Oct;6(8):826-34. Epub 2006 Mar 22. | | Copyright | Reprinted with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved. | | Comments | For cOsr1, we used EST clones 812m23 and 3k9 from the BBSRC ChickEST-Database (Boardman et al., 2002). Both ESTs showed an identical pattern. |
Entry 2| GEISHA Id | Odd-1.James.2005 | Data Source | Publication | | Complete cDNA Template Probe | show GAGCACCCAGCAAGCCCAGATTCAGAGGGCTGAGGGCAGACCATGAAGAGGTGAGCGACCTGGAGCAGCAAACTCTCTG
CAACTGCATCCCTCATCTCCCCAGCAGTGAGGGCTGAAGGCAGTTTTGGAGGGCAGACCAAATGAACAGTATCCCATCA
TTTTAGAAATGCTGAGACACCCAGTAAGGGATTTTTAATTACATGAGACAACCTCCAGCTTTGTGGGCTGATAGGTATC
TCCTTGCTGTCCCTGTGTGGAAGGTCATCAGAGGCACTCTTGGCACATGGATGCAGTTGGGGGGGAGAGAAGGGGGGCG
AGATACGACTGTGGATGGAGCATGCTGTAGCTGTGTGAGGGATGGGAGAAGGAGATCCATGTGGATACATTTGCAGTCA
AGAGGTGGTCAGACTTCTCCAGGTCCAAGACAATCTCCTCCTGTGGCTTTGTAGAGGGGCATTAATAAGAGACAAAGTG
AGAAATTCCCTTTGCTATTAACTTTATATAAATCCATCTCTCTTTCTTCTCCCCACCATCTTTTTTTTTTTTTTTTCCA
GATCTTTTCCTCCCCTGTTCCCAAGATCCTCCTCCTAAGTGGCCACCATGGGAAGTAAGACTCTGCCGGCCCCAGTGCC
TATCCATCCTTCCCTCCAGCTTACCAACTACTCCTTCTTGCAAGCATTCAACGGGCTGCCTGCTGTGCCTTCTGACCAC
CTTTCCAACCTCTATGGCTTCAGCGCCCTGCACGCCGTACACCTGCACCAGTGGACTTTGGGGTACCCGGCCATGCATC
TGCCCCGTTCCTCCTTCTCCAAAGTGCCCAGCGTGTCGAGCCTGGTGGATGCACGGTTCCAGCTGCCCACCTTCCCACT
CTTCCCACATGTCATCCAGCCCAAGCAAGAGGCTGCTAACATGACCCTCAAAGCCAAACCCCGCTTTGATTTTGCCAAC
CTCGCAGTGGCTGCCACGCAAGAGGACCACTCTAAATTGGGACAGGTGGACAGCCAGGGCTCCCCGCCAGGGCTGGGGT
CTTTGCTTGAGGTGACTAAACTCTCTCCAGAGAAGAAACCCACCCGGGGAAGGTTACCATCCAAAACCAAGAAGGAGTT
TGTGTGTAAATTCTGTGGCAGGCACTTCACCAAGTCGTACAACCTTTTGATCCATGAAAGAACCCACACTGATGAACGG
CCCTACACATGCGACATATGCCACAAGGCCTTCAGAAGACAGGATCACCTGAGAGACCACAGGTAACAATTCTCCTTTC
CATTTTGCCTTTGTATCTGTGCTTTCCCAGTAACCCGCCTACAGTCATAAAGCAGTCATACTTGTAAGAAAGGCCACGT
CCCCAGCCAGGCAGCACTGCTCCTCCTAGGTTCTTTACCCAGCTAGTAGGGAAGCTCAGATCACTCACTTGGAAGAGAA
GCCTATTGTACCTATCCACCCTACAAAGATGACCTGTACAGTCTCTTCAGCTTCTACAGATATTTTCATTGTGTGCTTA
CATCACCTTGTAGTCTTTACCTTTGTGATCACTATATGTCATGAAGACAGGCAGCCTGGTGACCCTGAAGTTAGTCAGA
AATACTTTATCCCTACAGAAGACCCTTGTATGCTTATAACACCCCTCTCTTCTTGCCCACGTGCATACAGCTGATTGCC
GGAGTGTTGCATTCCGGCACTCTTGGTCTCAGTGGTAGCCGTAAAAATCTCTGGAGTGTTTTCCATCAGTGCTGAGTTC
AGGCCAGTTGTTTCTGACATCTCGATTGTTTTTCTCTTCCTAGATATATCCATTCTAAAGAAAAGCCTTTTAAGTGTCA
AGAATGTGGGAAAGGATTTTGCCAGTCCAGAACTCTAGCTGTCCACAAGACACTGCACACGCAAGTAAAGGAACTGAAA
CCTGCCAAACTTAAGTGCTGAATCTCCGACTTCTATGAACTTTTCCTGCCCTTCAGATTTTACACCAGAACCAGAACAG
AAACAAAACTGTCAGGATGGGAGCACAGAACTTTGCGTTTTGATTTTTTTGTTTGTTTGTTTGTACTTTAGAAAGAGCG
AAATCTCCCCGAGAAACTCACTTCTTAAATCATGGATGGAAAGATTACTTGGCATTTAAAGCATACATGAATGACACAG
AAAGTGCTAGATGTGTGGCTTAGACAAACTTTATGCCAAAAGGTGGTGCTCACGTGTTGGACAGAAATCTCCTTAAAAA
CCAAACAAAAACCCACAAAACCCACAAAAAACCCCCCACAAAATATCCCAGCAGATCCCCCCTCCCGTCCCTTCCCAAC
TCGTAGCTTCCAAAAGTATTACTTAAATAAATAAATAAAAAGAACAAACTCTTATTTTATACTTTTTTTTTTTTTGACT
GTATAAAGCTTATTATTTTTACACTTCAGGAAATACAGAGAATTCCAGAAGACGGTTAAGAACTGCAATGTCGGTTTCT
CATCACAGCACCAACAGGACAAGGAGAAGGGCAACTCGAAAATCTTATATTTGTCTTCTTGA | | Citation | James RG, Schultheiss TM. Bmp signaling promotes intermediate mesoderm gene expression in a dose-dependent, cell-autonomous and translation-dependent manner. Dev Biol. 2005 Dec 1;288(1):113-25. Epub 2005 Oct 21. | | Copyright | Copyright © 2005 Elsevier Inc. All rights reserved. | | Comments | According to the authors, "A portion of the mouse Odd-skipped related 1 gene (mOdd-1) (So and Danielian, 1999) corresponding to the coding part of the three zinc finger motifs was used to probe 5x10^5 plaques from an HH stage 11 14 chick embryo lambda ZapII Phage library (Nieto et al., 1994). Three plaques were identified, one of which contained a full-length coding sequence for a gene 81% identical to mOdd-1 at the amino acid level. This clone, which is named chick Odd-1 (cOdd-1), will be described in detail in a separate publication (R.G.J. and T.M.S., in preparation)." |
| Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | | 7-11 |  | | stage 11 |
| Paraxial Mesoderm
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Entry 3| GEISHA Id | OSR1.Wilm.2004 | Data Source | Publication | | Complete cDNA Template Probe | show GCGGCTCGAGCTTTGATTTTGCCAACCTCGCAGTGGCTGCCACGCAAGAGGACCACTCTAAACTGGGACAGGTGGACAG
CCAGGGCTCCCCGCCAGGGCTGGGGTCTTTGCTTGAGGTGACTAAACTCTCTCCAGAGAAGAAACCCACCCGGGGAAGG
TTACCATCCAAAACCAAGAAGGAGTTTGTGTGTAAATTCTGTGGCAGGCACTTCACCAAGTCGTACAACCTTTTGATCC
ATGAAAGAACCCACACTGATGAACGGCCCTACACATGCGACATATGCCACAAGGCCTTCAGAAGACAGGATCACCTGAG
AGACCACAGATATATCCATTCTAAAGAAAAGCCTTTTAAGTGTCAAGAATGTGGGAAAGGATTTTGCCAGTCCAGAACT
CTAGCTGTCCACAAGACACTGCACACGCAAGTAAAGGAACTGAAACCTGCCAAACTTAAGTGCTGAATCTCCGACTTCT
ATGAACTTTTCCTGCCNCTTCCCAGATTTTAGCACNNCAGAACNNCAGAACANNGAAACGAAAACTTGTCCAGGATGGG
AGCANNCAGAACTTTGGTGTTTTGAATTTTTTTGTTTGTTTGTTTGTACTTTAGAAAGAGCGAAATCTCCCCGAGAAAC
TCACTTCTTAAATCATGGATGGAAAGATTACTTGGCATTTAAAGCATACATGAATGACACAGAAAGTGCTAGATGTGTG
GCTTAGACAAACTTTATGCCAAAAGGTGGTGCTCACGTGNTGGACAGAAATCTCCTTAAAAACCAAAAAAAACCAAAAA
AACCA | | Citation | Wilm B, James RG, Schultheiss TM, Hogan BL (2004). The forkhead genes, Foxc1 and Foxc2, regulate paraxial versus intermediate mesoderm cell fate. Dev Biol. 2004 Jul 1;271(1):176-89. | | Copyright | Copyright © 2004 Elsevier Inc. All rights reserved. | | Comments | Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (BU268041). |
Entry 4| GEISHA Id | OSR1.Fleming.2013 | Data Source | Publication | | Complete cDNA Template Probe | show ATGGGAAGTAAGACTCTGCCGGCCCCAGTGCCTATCCATCCTTCCCTCCAGCTTACCAACTACTCCTTCTTGCAAGCAT
TCAACGGGCTGCCTGCTGTGCCTTCTGACCACCTTTCCAACCTCTATGGCTTCAGCGCCCTGCACGCCGTACACCTGCA
CCAGTGGACTTTGGGGTACCCGGCCATGCATCTGCCCCGTTCCTCCTTCTCCAAAGTGCCCAGCGTGTCGAGCCTGGTG
GATGCACGGTTCCAGCTGCCCACCTTCCCACTCTTCCCACATGTCATCCAGCCCAAGCAAGAGGCTGCTAACATGACCC
TCAAAGCCAAACCCCGCTTTGATTTTGCCAACCTCGCAGTGGCTGCCACGCAAGAGGACCACTCTAAATTGGGACAGGT
GGACAGCCAGGGCTCCCCGCCAGGGCTGGGGTCTTTGCTTGAGGTGACTAAACTCTCTCCAGAGAAGAAACCCACCCGG
GGAAGGTTACCATCCAAAACCAAGAAGGAGTTTGTGTGTAAATTCTGTGGCAGGCACTTCACCAAGTCGTACAACCTTT
TGATCCATGAAAGAACCCACACTGATGAACGGCCCTACACATGCGACATATGCCACAAGGCCTTCAGAAGACAGGATCA
CCTGAGAGACCACAGATATATCCATTCTAAAGAAAAGCCTTTTAAGTGTCAAGAATGTGGGAAAGGATTTTGCCAGTCC
AGAACTCTAGCTGTCCACAAGACACTGCACACGCAAGTAAAGGAACTGAAACCTGCCAAACTTAAGTGCTGAATCTCCG
ACTTCTATGAACTTTTCCTGCCCTTCAGATTTTACACCAGAACCAGAACAGAAACAAAACTGTCAGGATGGGAGCACAG
AACTTTGCGTTTTGATTTTTTTGTTTGTTTGTTTGTACTTTAGAAAGAGCGAAATCTCCCCGAGAAACTCACTTCTTAA
ATCATGGATGGAAAGATTACTTGGCATTTAAAGCATACATGAATGACACAGAAAGTGCTAGATGTGTGGCTTAGACAAA
CTTTATGCCAAAAGGTGGTGCTCACGTGTTGGACAGAAATCTCCTTAAAAACCAAACAAAAACCCACAAAACC | | Citation | Fleming BM, Yelin R, James RG, Schultheiss TM. A role for Vg1/Nodal signaling in specification of the intermediate mesoderm. Development. 2013 Apr;140(8):1819-29 | | Copyright | © 2013. Published by The Company of Biologists Ltd | | Comments | Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (NM_001168709.1). |
no images MouseFrogFruit FlyZebra FinchZebrafish |
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