GEISHA - A Chicken Embryo Gene Expression Database
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MATN3
matrilin 3

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolMATN3
Official Full Namematrilin 3
CGNC ID12338
also known asmatrilin-3, matrilin-3
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_205072
PolypeptideNP_990403
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4148ENSG00000132031MIM:607078MIM:602109
Mouse17182ENSMUSG00000020583All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(3) MGI:1328350
Xenopus985171
Zebrafish497645, 445503ENSDARG00000069265, ENSDARG00000069245ZDB-GENE-050221-9, ZDB-GENE-040822-21ZFIN:ZDB-GENE-050221-9, ZFIN:ZDB-GENE-040822-21
Gene Ontology
Molecular Functioncalcium ion binding
Biological Process
Cellular Componentproteinaceous extracellular matrix
Links to other databases
Entrez Gene395954
Ensembl GeneENSGALG00000016478
KEGGgga:395954
GEISHA IdMATN3.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerATTACGCCAGCACCGTCAAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCCTTCAAAGCATTCACAGACATAGGcDNA Template Length625
Forward cDNA Template Probeshow
GTTGTTACTCACACAGAATCTGGATCGCATTCATGGCCTCCCAGGGTGCACACACATCCACAGCTGAAGCAAGTTCTCT
TATCTGGATTCAGAGTGTAGCCTTCATAGCAATCACAGAGGTAGGATCCATCGTTACTCACGCAGACCTGCTCACAGTC
NTGGGTCCCAAGTGCACATGTATTTGCAGCACAGAACGTCTCTCGGAACTTGGATGTCAGCTTCTCGATCACACCGTAG
GTCTCCACATAAAAGACGTGTTCATCCAGCGGCTCGCTGGCCATTATCCTCAGGGACTGCATGTCAGCACGGCCTACCC
CCACTGCGTAGATCTCAATGCCAGCCGTGCGGGCGTTTGCTGCCACGTTTTCAACCTGGTCTTGTGGCCGTCCATCTGT
CACAATAATGACCACCTTGGGGATATTGAAGTTGGCTGGCCGGGTACCCATCTCCTCAGTGAAGACTTCGTCCATGGCA
GCTTGGATGGCAAGGCCAGTCATGGTGCCAGCAGACAGGGGCTGAATGCGAGACACGGCCTCCTTCATGGAGGCTTTAT
CAAAGTAGGTCCGGAGGGGAAACTCTACCTTGACGGT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 7
stage 9
stage 9
Early Endoderm
Endoderm
 
13-18
stage 13
stage 14
stage 16
Forebrain
Hindbrain
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Unlabeled
 
19-24
stage 21
Unlabeled
 
25
stage 25
Aorta
Foregut
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Sclerotome
 

Mouse

EmageMGI:1328350
MGI GXDMGI:1328350

Frog

Xenbase985171

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-050221-9, ZDB-GENE-040822-21
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