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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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NDST2
N-deacetylase and N-sulfotransferase 2

Gene

Official Symbol	NDST2
Official Full Name	N-deacetylase and N-sulfotransferase 2
CGNC ID	3802
also known as	bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2\|Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2\|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_421613
Polypeptide	XP_421613
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.48600

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	38736			FBgn0020251
Human	8509	ENSG00000166507		MIM:603268
Mouse	17423	ENSMUSG00000039308	All phenotypic alleles (5):Targeted, knock-out(3) Targeted, other(2)	MGI:97040
Xenopus	100217321			943996
Zebrafish	793524	ENSDARG00000086269	ZDB-GENE-060810-182, ZDB-GENE-100430-2	ZFIN:ZDB-GENE-060810-182, ZFIN:ZDB-GENE-100430-2

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	423738
Ensembl Gene
KEGG	gga:423738

GEISHA Id	NDST2.Roy.2013	Data Source	Publication
Complete cDNA Template Probe	show GAGTTTGGAGCAAACCTTAACTTACCTCTAAACTTGAAGTTTTTGTGGTGATGAATTCCAAGGAGTTCGATCTCAAAAG AGAAGCCAGGATGCACAGAGACGGTGCCATCATGTGAATGCAAAATTGCTAAATGAGAAACAGGACACCTGGGAAGGCT GAGCTGAAAGTGCTTGTGCACAGGATGACAGACTGATTTTCTGCTGGAGTCAACACTCAGGAAACCCCCCTCCTCCAAA AGACTTTCTGAGTGAGAGAAGAGGAACAGGAAGAAGCACGCAAAAGAGCGATGGGAATTGAGGGCCATGGTTACTTGAG ATAAATGGCACATCCCTGGGAGTTTAGCCTGGTAGCTGTTTGCTTCTGCTTTGTCTCTCTCCGCAGCTGCTGCTGGGTA CTGCCACAGTGGCACTGGAGATTTCAAGAGCGACGTGGCTGCAGGGTGTGAGGAGGGGGTGGGCAGCCCGCCTCACCAT GATTCAGTTGTGGAAAGTAGTGCGGCATGTGCGACAGCTAGAGCTCCACAGGTTGATCCTGCTGCTCATTGCCTTCAGC CTGATCTCCATGTGCATCCTGGCTTACTACGTCACGAACAGTCCCAAAATCAAGGAGCCACCACCCCTGCCCTTCAGTG ACTGCAGCAACCAGCACCGCATCTCGATCCCACCGCAAGCCAGCTGGAGGCTTACCAAATCTGTGGACACCTCACGCAC AGATCCTGTGGTGCTAGTCTTTGTAGAAAGCATCTACTCCCAGCTGGGGCAGGAAATAGTGGCTATCCTGGAATCTAGC CGGTTTAAATACAGGACAGAGATCGCCCCTGGCAAAGGGGATATGCCAACGTTGACAGACAAAGATAGGGGACGCTATG CTCTTATCATTTATGAGAATATCCTCAAATATGTGAATCTAGATGCTTGGAACCGAGAGCTGCTGGACAAATACTGTGT AGAGTACGGAGTGGGGATTATAGGCTTTTTCAAAGCCAACGAGAACAGCTTACTCAGTGCACAGCTCAAGGGTTTCCCC CTTTTCCTACATTCCAACTTGGGGCTGCGGGACTATCACATCAACCCCAGTGCTCCTCTGCTCTACGTTACACGGGCTA ATGAGGTGGAGCAAGGTCCCCTGCCTGGTGATGACTGGACCGTATTCCAGTCAAACCACAGCACCTACGAACCGGTGCT GTTGGCCAGCACGAAGTCCTCAGAGTCCATTCCTCACCTGGCCACCCACAAAGCATTGCATGCCACGGTGGTGCAGGAT CTGGGTCTGCATGACGGGATCCAGCGGGTTCTCTTTGGCAATAACCTCAATTTCTGGCTGCACAAACTGATTTTCGTGG ATGGCATTGCCTACTTGACTGGCAAGCGCCTGTGTCTCACGCTTGATCGCTATATCCTCGTCGACATAGATGATATATT TGTGGGAAAAGAGGGCACTCGCATGAAAGTGTCTGATGTAGAGGCTTTACTGAGCACCCAGAATAAGCTGAGAACTTTA GTCCCAAATTTCACCTTCAACCTGGGCTTCTCAGGGAAATTCTACCACACAGGTACAGATGAGGAAGATGAAGGCGATG ACATGCTACTCAAGCATAGGAAGGAGTTCTGGTGGTTCCCTCATATGTGGAGTCACATGCAGCCTCATCTTTTCCACAA TGTCACTGTGCTGGCTGAGCAGATGAAGCTCAACAAACAGTTTGCTGTGGAGCACGGGATCCCCACAGACTTGGGCTAT GCTGTAGCCCCCCATCATTCTGGGGTTTATCCTGTCCACACACAACTCTATGAGGCATGGAAATCTGTTTGGAGCATCC AAGTAACAAGCACAGAGGAATACCCACACCTGCGACCTGCCCGGTACCGACGTGGATTCATCCATAATGGAATCATGGT TCTGCCTCGACAGACCTGTGGCCTTTTTACTCACACTATCTTCTATAATGAATATCCTGGCGGCTCAAAGGAGTTGGAC AAGAGCATTCGTGGCGGTGAACTCTTCCTGACAGTGCTCCTGAACCCAATCAGCATCTTCATGACCCACCTGTCTAACT ATGGGAATGACCGCCTGGGACTGTACACTTTTGAGAGCCTGGTCAAGTTTGTGCAGTGCTGGACCAACCTTCGCCTGCA GACACTGCCCCCAGTCCAGCTTGCAAAGAAGTACTTTGAAATCTTTCCCCAGGAGAAGAATCCCTTGTGGCAGAATCCC TGTGATGATAAGAGGCACAAGGATATCTGGTCCAAAGAGAAAACATGTGATCGTCTCCCCAAGTTCCTCATTGTGGGAC CTCAGAAAACCGGCACAACAGCTGTGCATTTCTTCTTGACCATGCATCCAGCTGTCACCAGTAACTTCCCAAGTCCATC CACTTTTGAGGAGATCCAGTTTTTTAATGGGCCCAACTATCATAAAGGAATTGACTGGTACATGGAATTCTTTCCAATC CCCTCCAATGCCAGCACAGACTTCATGTTTGAGAAGAGTGCCAATTACTTTGACACAGAGGTAGTACCAAAACGTGGTG CAGCCCTGCTTCCTCGAGCCAAAATCATTACTGTTCTGATCAACCCTGCAGACAGAGCCTACTCATGGTATCAGCACCA GCGAGCTCACAATGACCCCGTGGCACTCAATTACACCTTTTACCAAGTGATCTCTGCAAAATCCCAGGCCCCTCAGGAG CTGCGCAACCTGCAAAGCCGATGCCTGCTTCCTGGCTGGTATTCAACTCATCTAGAGCGCTGGCTAACGTACTTCCCCT CTGGGCAGATTCTCATTGTGGATGGTCAGGAGCTGAGACACAACCCTGCCTCTGTAATGGACAACATCCAGAAGTTCTT GGGAGTTACACCACTCTTCAACTACACTCAGGCCCTAAGATTTGATGAAGCAAAAGGATTTTGGTGCCAGCTGTTAGAT GGAGGAAAGACCAAATGCCTGGGAAAGAGTAAAGGAAGAAAATACCCTGACATGGATTCCTCGTCACGGCTGTTCCTAA GAGACTTCTACCGGGAGCACAACATTGAATTATCCAAGCTGATGAACAGACTTGGACAGCCCCTTCCAACCTGGCTCCG AGAGGAACTGCAGAACTCCAGCTGGAGCTGAGAGGGACTCCCCTGTTCCCAGTGCCACTGGGATGTGTGGTGCTCCAAC ATGTGCTATGATGCCATCTCTCGTCAAGCCAAAACAAGTGGACAAATGAGCAGTAGCAGAGAATGTGCATGTGGAGCCT TTCCCCACCACTGGGAAGGGCTGCTGCTTCTGACACTGCCCTGAGGCATGGAGTGCAAATCTCATTCTGGAGTATTAAT GGTGTGTCACACTTTGACTCTTACTTGCAGGAAGGATGTCTGCCCTACTTTGAGCAGGAGCGAGAGCACGGTTAACACT TTATGTTTAAATTACTCTTCTCAGTATATGAAACAGGCACTAGTTGGAGGGTTTATGTCTTTCGCCTCTGAGTCCAGAA AAAAAGATATGAGAGGTAAGTTATAGAGCCCACTGATGAGAAAAGAGGAACAGCTTAAGAAAAGAGGAATCTAGTCCAG TGAACCTCAGCTTTTATCCAGCAGTCTGTTATTTGGCAACAGCAAGGTACAAGAACACCTCTTTCCTCCCCAGGTGCAG TACAGTGGCCATGACAATTACTTACAGTGCCACAGTGTGTGTGTGCTGGGGACTGCACCGTCTTGGAGACAGATGTACA GGCATAAGATTGCCGCTCCTTATCTGCAGCCTTGATGGTGCAATACGGTGTCCAATGACTCTGGTCAACGGGTAGTGGG AGATAAGGCAAAGCTGCAGACACGGACACCAAATTAATTTCTTATCTTAGGGAAAAGGTTGCCATACATGACAACATGG CAAGTATTTCTCTATAGGGGCATCAGCCATTTCAGAAGATGCCCAAGGAATGGTAAGTCAGTCCCTTTGGCGCACGTTG GAGGCCTGTGTTAGCGGAGCACAGTAGCTGGGGGAGGCAAAGCTCGGTACAGTTAAATAAGGCTGAAAGCAGACAGTTC AGTTCCCTCTTGTCTGATTAACTTATTAAAAAAAAAAAAAACAAAACATTTTTTGTCTTCTCAACAGCTCCAGGGTCTT TAACCATGTATGCTAATACCTGTTTAATCCCCCTGCAGTCCAGCAGTGCAAGGAGAAATAAAAAACCCAACCCAGAGTA AGTACCATTAAGATATACAGGGAGGGCTTAGCATTTTAAGCAGGAATGTGGTTTCTTGTATCCAAAAGGGGCTGTTTGT TTAGATTACTATTTCTGCACATAGTCAATAATTTAAGTACACTACGGTGCTGTGCCTCCTCTTGCAGTTGTTGGATAAT TTTTCTCAGAGGAAATCCTCCATCATGGTTGTACATGTTTTCTGTTGCTGAGCCATGGGCTTCTCAAGTTGTATGGGCT ATTGTCCCTCCCTTGTGGGCACAGATGGACCTGTATTGTTGCGGTTCCAGAGAGGGGCAGGATCCATGTGAACACAGGT TATGGAAGCTTCCACAACTGTCATGAGCTCCTTTTCGCCTATTGGAGGAGAAAAGTTGCTTCAACCAAGCTTTTCCATT GAGCCTTAGGTATTGTGTATTTCTGAATGAATGGTGCATTTACCGTTGTATGTAAATGTATATAGTTTGCAATATAGTA TTTTATTTCATGTGCCCTTGGAAAGGGTTATTTTGTGCAGCCAAAAAAAAAAGGACAAAGACTAGAAACCCCTCTCTCA GTCCTGTTAGAGAGAAGAGCCCAACTTCCTGCACTGGATCATGTATAGCATCATTCACATTGAATGATAATGAAGAAAT TCCTGGCTCTCAAAACAGAGCACAAGTGTCTGAATAAAGGCTAGAAGTAGTAGTAAGTGGATTCAATAAATGTACTACT TATTTTTCTTC
Citation	Roy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_004942076.1

Stage

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Location (click to highlight)

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13-18

stage 18

stage 18

Cranial Ganglia
Hindbrain

19-22

stage 22

stage 22

Data from NCBI Unigene EST Profile
Unigene ID: Gga.48600

Mouse

Emage	MGI:97040
Eurexpress	MGI:97040
MGI GXD	MGI:97040

Frog

Xenbase

Fruit Fly

BDGP	FBgn0020251

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-060810-182, ZDB-GENE-100430-2

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