GEISHA - A Chicken Embryo Gene Expression Database
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SGF29
SAGA complex associated factor 29

Gene
Official SymbolSGF29
Official Full NameSAGA complex associated factor 29
CGNC ID14247
also known asCCDC101, SAGA-associated factor 29|SAGA-associated factor 29 homolog|coiled-coil domain containing 101|coiled-coil domain-containing protein 101
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001031298
PolypeptideNP_001026469
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly37429FBgn0050390
Human112869ENSG00000176476MIM:613374
Mouse75565ENSMUSG00000030714All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1922815
Xenopus100144975, 1000368195810013
Zebrafish449813ENSDARG00000002339ZDB-GENE-041010-62ZFIN:ZDB-GENE-041010-62
Gene Ontology
Molecular Functionmethylated histone residue binding
Biological Processhistone H3 acetylation, regulation of transcription, DNA-templated, transcription, DNA-templated
Cellular ComponentAda2/Gcn5/Ada3 transcription activator complex, SAGA-type complex
Links to other databases
Entrez Gene424726
Ensembl GeneENSGALG00000020590
KEGGgga:424726
GEISHA IdCCDC101.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-GCGAGCACAACCTCATCAAC-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGTGCGTTTGGGGTCCTTTAGG-3'cDNA Template Length1047
Complete cDNA Template Probeshow
GCGAGCACAACCTCATCAACATCCAGAAAACGCACGAGAGGATGCAGACCGAGAACAAGATCTCTCCGTACTACCGCAC
GAAGCTGCGCGGGCTATACACCACTGCCAAGGCGGACGCTGAGGCCGAGTGCAACATCCTGCGGAAGGCGCTGGACAAG
ATTGCTGAGATCAAGTCTCTGCTGGAGGAGCGCCGCATCGCCGCCAAGATTGCAGGGATCTACAGCGACGCGGAGCCGC
CGCGCAAGACGATGCGCCGGGGCGTGCTGATGACACTGCTGCAGCAGTCAGCCATGACACTGCCGCTCTGGATCGGCAA
GCCAGGCGATAAGCCCCCCCCTCTGTGCGGCGCCATGCCAGCAGCCGGGGACTATGTGGCCAAGCCTGGGGACAAAGTG
GCTGCACGTGTCAAGGCCGTGGACGGCGACGAGCAGTGGATCCTGGCTGAGGTGGTCAGCTACAGCCACGCTGCCAACA
AGTATGAGGTGGATGACATCGATGAAGAGGGCAAAGAGAGGCACACACTCAGCCGGCGCCGCGTGATCCCTCTGCCGCA
GTGGAAGGCGAACCCTGAGACTGACCCTGAAGCGCTGTTCCAGCGCGAGCAGCTGGTGCTGGCGCTGTACCCACAGACC
ACCTGCTTCTACCGCGCCCTCATCCACGCGCCGCCGCAGCGGCCGCAGGACGACTACTCGGTGCTGTTCGAGGACACGT
CGTACGCCGACGGTTACTCACCACCGCTGAACGTGGCACAGCGCTATGTCGTCGCCTGCAAGGAGACCAAGAAGAAGTG
ACCCTTGCAGTTTGGGGTACTTTGGGGATTTGGGACTGTTTTGGGGATTTTTGGTGGTCTGGGGTGTCTGTGAGCTTTA
TGCCAAGTTCCGATGCTGTGGGTCGTGCTGTTTTTTGGGGTGAATTTGGGGCATTTTGGCTATTTGCTGTCATGGGTGA
GGGGCTGTAGGGACCCCATAGTGGCACTGTGAGGGCTCTAAAATCACAACATTCCACCCCAAAGCGCACCCCATAGTGC
CCTAAAGGACCCCAAACGCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Early Mesoderm
Epiblast
Extraembryonic Mesoderm
Primitive Streak
 
7-12
stage 8
stage 10
stage 11
Anterior Intestinal Portal
Blood Islands
Forebrain
Head Mesenchyme
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Sinus Venosus
Somites
Spinal Cord
extraembryonic ectoderm
extraembryonic endoderm
 
13-18
stage 18
Ubiquitous Embryonic
 
19-24
stage 19
stage 20
stage 22
Allantois
Eye
Foregut
Head Mesenchyme
Heart
Leg Mesenchyme
Liver
Lung
Mesonephros
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Ubiquitous Embryonic
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Lung
Mesonephros
Midbrain
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

EmageMGI:1922815
MGI GXDMGI:1922815

Frog

Xenbase5810013

Fruit Fly

BDGPFBgn0050390

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-041010-62
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