Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

HMGN1
high mobility group nucleosome binding domain 1

Gene

Official Symbol	HMGN1
Official Full Name	high mobility group nucleosome binding domain 1
CGNC ID	49596
also known as	HMG14, non-histone chromosomal protein HMG-14B\|HMG-14 protein, HMG-14B, Nonhistone chromosomal protein HMG-14B
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_205106
Polypeptide	NP_990437
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.1189

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3150	ENSG00000205581		MIM:163920
Mouse
Xenopus	394660, 380456, 100329179			5782072
Zebrafish

Gene Ontology

Molecular Function	nucleosomal DNA binding
Biological Process
Cellular Component	chromatin, nucleus

Links to other databases

Entrez Gene	395999
Ensembl Gene	ENSGALG00000016067
KEGG	gga:395999

Entry 1

GEISHA Id	HMGN1.53W.A4	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show CCGCCAGCGGCGCGGAGGCCGCTGAGGAGGTACCGAAGAGGAGATCGGCGCGGCTGTCCGCCAAACCTGTGCCTGACAA AGCGGAGCCTAAAGCTAAGGCGTTGGCGGCTAAGGATAAATCCGAGAACAAGAAAGCTCAATCAAAGGGGAAAAAGGGG CCTAAAGGAAAACAGACTGAAGAGACAAACCAAGAGCAGATAAAGGACAACTTGCCTGCAGAAAATGGAGAAACTAAAA GTGAGGAGACCCCAGCATCTGATGCAGCAGTAGAGAAAGAAGAGGTGAAGTCTGAATAACATCTGGTACCAAGTGTTTA ATTGATTGGGAGGAAGAGTTTTTCTATCTTATTAAATGAAGCGCAACACAGACGTCGGAATTTGTAATATGTTGAGAAC ATCTTAACATTTTAGTTATTTATCTGTGGTTGTACCATCAGTAGAATTGCTTATCTCGTGAACTGCTCCCTAGTGTTGG ATTTCTTGACGAGTAATGTATATCTGTGACAAAGTTATTTTTGGTAGGTGTAGGTTTATTTTCCAACAACTTTGTAACT GCCACGTCAAAGACTGGAAACTTTTATCTTTAAGTACTGAATAGGTAAAAGTTTCTGACTGATAGACTGAATGTCAGCT GGTACTTCACATTTAGTTTTAAAGGAGAGCTTGTCTACAAAGTTCAAATAAAAGATATTTGAAATAGGCTTAGAAAAAA ATAAAACTATAGTTTTTATATTAAAAAGAAACTATGTGAATAAGAACAGTTGTAAAATTGTAGTGTCTGTGATCACCAA ACAAAAGCCAAATAAATCTTGATCAAGAAAAAAAGAAT

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Area Pellucida
Mesoderm
Primitive Streak

7-12

stage 9

stage 11

stage 12

Blood Islands
Blood Vessels
Head Mesenchyme
Mesoderm

13-18

stage 13

stage 16

Blood Vessels
Head Mesenchyme
Somites
Trunk Mesenchyme
Wing Mesenchyme

19-23

stage 19

stage 21

stage 22

stage 23

Allantois
Blood Vessels
Leg Mesenchyme
Limb Buds
Mesoderm
Pharyngeal Arches and Clefts
Somites
Trunk Mesenchyme
Wing Mesenchyme

ambiguous

Entry 2

GEISHA Id	HMGN1.53X.A4	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GCCGCCAGCGGCGCGGAGGCCGCTGAGGAGGTACCGAAGAGGAGATCGGCGCGGCTGTCCGCCAAACCTGTGCCTGACA AAGCGGAGCCTAAAGCTAAGGCGTTGGCGGCTAAGGATAAATCCGAGAACAAGAAAGCTCAATCAAAGGGGAAAAAGGG GCCTAAAGGAAAACAGACTGAAGAGACAAACCAAGAGCAGATAAAGGACAACTTGCCTGCAGAAAATGGAGAAACTAAA AGTGAGGAGACCCCAGCATCTGATGCAGCAGTAGAGAAAGAAGAGGTGAAGTCTGAATAACATCTGGTACCAAGTGTTT AATTGATTGGGAGGAAGAGTTTTTCTATCTTATTAAATGAAGCGCAACACAGACGTCGGAATTTGTAATATGTTGAGAA CATCTTAACATTTTAGTTATTTATCTGTGGTTGTACCATCAGTAGAATTGCTTATCTCGTGAACTGCTCCCTAGTGTTG GATTTCTTGACGAGTAATGTATATCTGTGACAAAGTTATTTTTGGTAGGTGTAGGTTTATTTTCCAACAACTTTGTAAC TGCCACGTCAAAGACTGGAAACTTTTATCTTTAAGTACTGAATAGGTAAAAGTTTCTGACTGATAGACTGAATGTCAGC TGGTACTTCACATTTAGTTTTAAAGGAGAGCTTGTCTACAAAGTTCAAATAAAAGATATTTGAAATAGGCTTAGAAAAA AATAAAACTATAGTTTTTATATTAAAAAGAAACTATGTGAATAAGAACAGTTGTAAAATTGTAGTGTCTGTGATCACCA AACAAAAGCCAAATAAATCTTGATCAAGAAA