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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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PKDCCB
protein kinase domain containing, cytoplasmic b

Gene

Official Symbol	PKDCCB
Official Full Name	protein kinase domain containing, cytoplasmic b
CGNC ID
also known as	PKDCC, protein kinase domain-containing protein, cytoplasmic\|extracellular tyrosine-protein kinase PKDCC\|protein kinase domain containing, cytoplasmic homolog\|protein kinase domain-containing protein, cytoplasmic like 1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_421361
Polypeptide	XP_421361
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	91461	ENSG00000162878		MIM:614150
Mouse	106522	ENSMUSG00000024247	All phenotypic alleles (3):Targeted, knock-out(2) Targeted, other(1)	MGI:2147077
Xenopus	100216132, 100037022			5993400
Zebrafish	565254	ENSDARG00000038235	ZDB-GENE-130530-599	ZFIN:ZDB-GENE-130530-599

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	423451
Ensembl Gene	ENSGALG00000011166
KEGG	gga:423451

Entry 1

GEISHA Id	cADTK1.Bento.2011	Data Source	Publication
Complete cDNA Template Probe	show CCGAGGAGCTGTCGTGTGAGGAGGATAATGACTGCACACTCGACTTCCCCACAAAAAGCTTTCCTCTCCAGTGCTCTTC GGCTGGGAAGTGCGAAGGAATAAACGAGAAGAGGAATCTCTTCAACGCGTATCGGTATTTTTTCACCTATCTTCTGCCA CACTCTGCACCACCAGCTTTGCAGCCCTTTTTGAGTGATATTCTCAATGCAACAGGTAACTTACGGTATGGAATAAATG AAACCCTGAGAGCTTTTGAAAAGGTTTTACATCTGTACAAGTCTGGGCTCTATCTACAGAAAAGACCTCTTCTTTTAAA AGACTACATCTTCCTGAGGGGCTTCCGGATGGAGGAAGCAGAGGCCTACAAGTGCTGGCCTTCCTACAGCCACCTGGGC TGCCTGCTGTCTGTCCACAGCCCCGAGGAGGCCGCTGCCATTTGTAGTTCCCAGCCACAGTGTCAGAGTTTCATCATCA CCCAGCAGAGAACGTGGACGGGACGCCCACTCGCCTCATTTCAGAGCAGCCCAACTGATTTAATACCGGATACTACTGC TGTTCTGCATAAACAATCTCAGTTTTAGTTAAATGTGGCCAGGCACTGCAATACCTTGCCTTGCTGCTTCAGTAGTCAG CTTGTCAGCCAAGAAATAGCAATAGCTGCAGGGACCTGGCTGGAGTAAGCCCAGTTTGCTCAGCAGACTCCGCATAACT TAGAAATAACACACGCTGGAGAAGGCAGCAGCTCCTCCTGCAGCTGCCAACAAGGGTTTCACACCACTGCAGATGGAAG GGCTTGGACCTCAGTGGGGGGGTGCAGGCTGGGGTCCGTATCCAGAGGTTGAAGCTGGGGATGGCCTTCTGAGGAGGGT CGTGGTTCAGCTCCTTTGGGTCAGAGAAGGGAAGGCGGCATGGAGGTCAGCTCTGGAACCCGGTGCCAGAATGCTTGGA TGTAGGATTTGGGTTTGAGCGGGTGTGATTTGCAATGCCAGCTCCCATGTATCAACCTTGAAGGTTTTTTCTGTTACTT TCCGTGAAAGAGCGAGACGTTCAAATTATTTATGTACCAGGTGTTACTCTGTGTGGTAAAGAATGTTTATTCT
Citation	Bento M, Correia E, Tavares AT, Becker JD, Belo JA. Identification of differentially expressed genes in the heart precursor cells of the chick embryo. Gene Expr Patterns. 2011 Oct;11(7):437-47.
Copyright	Copyright © 2011 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # ChEST884h13). Also known as: PKDCC, PKDCCB

Stage

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Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

stage 5

stage 6

Early Endoderm
Early Mesoderm
Mesoderm
Neural Plate/Tube

hf, heart fields

7-12

stage 7

stage 8

stage 9

stage 10

Amnion
Endoderm
Heart
Lateral Plate Mesoderm
Sinus Venosus

hp, heart primordium
pa, pro-amnion

13-14

stage 14

Heart
Lateral Plate Mesoderm
Tail

all

Entry 2

GEISHA Id	PKDCCB.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show CTTAGCTTTTGAAAAGGTTTTACATCTGTACAAGTCTGGGCTCTATCTACAGAAAAGACCTCTTCTTTTAAAAGACTAC ATCTTCCTGAGGGGCTTCCGGATGGAGGAAGCAGAGGCCTACAAGTGCTGGCCTTCCTACAGCCACCTGGGCTGCCTGC TGTCTGTCCACAGCCCCGAGGAGGCCGCTGCCATTTGTAGTTCCCAGCCACAGTGTCAGAGTTTCATCATCACCCAGCA GAGAACGTGGACGGGACGCCCACTCGCCTCATTTCAGAGCAGCCCAACTGATTTAATACCGGATACTACTGCTGTAGCT TATATTAAACGATCAGCTTCCTTAGGGAGAAGACTTTAAAGACAATGAGATCACATAAAGCAATCCACGGAGGAACAAA TCACTCGGGGAGAAGTTCATCTCCTGAAAGGAACGACATGCTTTCTTTTGCTCGGGTTGTGATCTCCCTGCCAGCTCAG ATTGAGTCAAATGCTGCTGTCTCCTTGATCAAAGCTCCAATTTCTTGTTGCAGAATGCTCCTTCCCCGCAGCCCCGCTA GCTTGTTTAGCTGTTCCCACGCTGCTGTTCTGCATAAACAATCTCAGTTTTAGTTAAATGTGGCCAGGCTCTGCAATAC CTTGCCTTGCTGCTTCAGTAAGTCAGCTTGTCAGCCAAGAAATAGCAATAGCTGCAGGGACCTGGCTGGAGTAAGCCCA GTTTGCTCAGCAGACTCCGCATAACTTAGAAATAACACACGCTGGAAAACGGCAGCAGCTCCTCCCGCAGTGGCAACAA GGGTTTCACACCACTGCAGATGGAAGGGTTGGACCTCAGTGGGGGGGGTGCAGGCTGGGGTCCGGTATCCAGAAGGTTG AAAGCTGGGGGATGGCCTTCTGAGGAAGGCCGGGTTTCAAGGTCCTTTGGGGTCAGAGAACGC
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.