GEISHA - A Chicken Embryo Gene Expression Database
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FMR1
fragile X mental retardation 1

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolFMR1
Official Full Namefragile X mental retardation 1
CGNC ID51729
also known assynaptic functional regulator FMR1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_003641126
PolypeptideXP_003641174
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.12650
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2332ENSG00000102081MIM:300624MIM:309550
Mouse14265ENSMUSG00000000838All phenotypic alleles (8):Targeted, knock-out(2) Targeted, other(6) MGI:95564
Xenopus448049, 735034, 373706977112
Zebrafish259191ENSDARG00000037433ZDB-GENE-020731-6ZFIN:ZDB-GENE-020731-6
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422395
Ensembl Gene
KEGGgga:422395
GEISHA IdFMR1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTAGCCCAAGCAGAAGAGGAACGAG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGGTGGACCAGAATGTGAACTGACACcDNA Template Length841
Forward cDNA Template Probeshow
AAGGGACTAAACGACATAGCATTTCATGAAGAACTTGTAAGTTAAATTGAAAACAGAAGCCAATTTGATTACTGCAAAC
ACTATTTATTCTGAGAATTGAAATTGAGCAGTGATTTTGACCCAGTGCGTTAAAAATGGTACAACTGAACAGAAAGTTT
ACCAATGCACAGCTCAGTATTTTTAAAACAAACAAAAAAGATTCTTTAGTTATTTGAAGTGTAATATGTACTTGAAAGC
AATTTTCGGAAATTCAGGTATTTTTTAATGCAAATATTTTAATAACTTTTTGTTCTGAAAACAACTGCATATTGTTGAT
GTTAAAAAAAGGCTAACAGAGAACATATGTTCATTTCATGCCCTGCGCCATCTTGCCTACTATTTGTCTTTGGCCTAAC
AAGTTTCTCTAACGTGGAATAGGAATTACTGAAACAGTACAGGAAATATGACTTCAGACTTATGCAGTTTAGGGTACCC
CATTCACCAGCGGCTGTTGACCATCTGCGTTGTCCGCTTTCTCTTTCTTCTGATTACGTTCTTTACCTGTGCGCAGCCG
GCTGCCTTCGCTGGAGGTATTCAGTAAAGATCCATCTGCTGTTCTCCCTTTTGCATCTCTTGAATTACGCTGACGGTTA
TCTGTTCGTGACTGCTCATCATTTCCTTTGAATCCTCCACGACCCCTCCCTCCTTGTCCTCTTGGACCACCTCCACGTC
TTCACCCATCTCCACTGCGAAGGTAGTTGTCTCGTTCCTCTTCGCATTGGGCTAAACCATNTNCCCTGCAAAGGTAGTT
GTCTCGTTCCTCTTCTGCTTGGGCTAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Pellucida
Headfold
Neural Plate/Tube
Primitive Streak
 
7-12
stage 7
stage 8
stage 8
stage 9
stage 10
stage 11
Anterior/Second Heart Field
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Stage 8+ to 9-
Stage 8-
13-18
stage 13
stage 14
stage 17
Anterior/Second Heart Field
Intermediate Mesoderm
Mesoderm
Neural Plate/Tube
Pharyngeal Arches and Clefts
Primitive Streak
Somatic Mesoderm
Somites
Spinal Cord
 
19-24
stage 21
stage 21
stage 23
stage 23
stage 24
stage 24
Anterior/Second Heart Field
Mesoderm
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Widespread Expression
 
25
stage 25
stage 25
Anterior/Second Heart Field
Mesoderm
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.12650

Mouse

EmageMGI:95564
EurexpressMGI:95564
MGI GXDMGI:95564

Frog

Xenbase977112

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-020731-6
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