GEISHA - A Chicken Embryo Gene Expression Database
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POU2AF1
POU class 2 associating factor 1

Gene
Official SymbolPOU2AF1
Official Full NamePOU class 2 associating factor 1
CGNC ID
also known asCHOBF-1, OBF-1, POU domain class 2-associating factor 1|POU domain, class 2, associating factor 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
GenomicGenbank
RNANM_204175
PolypeptideNP_989506
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4907
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5450ENSG00000110777MIM:601206
Mouse18985ENSMUSG00000032053All phenotypic alleles (4):Targeted, knock-out(3) Targeted, other(1) MGI:105086
Xenopus100496996, 495977854771
Zebrafish100334489
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene373994
Ensembl GeneENSGALG00000006809
KEGGgga:373994
GEISHA IdPOU2AF1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCACCGAGAGTTTTGCCTGAGTC
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGCTTGGTCCACACACCTATTATCCCcDNA Template Length924
Forward cDNA Template Probeshow
CGGAAAAAAATTGTCAGGAAGCTTTCTGAATGATTCTGTACTCATAAAACTGGAGTAAGCAGTGGTGAACCAAACTCCA
TTCCCCTTAATAGCTTTGCTGGGTTTTTCTGCAAATGTAACCCACTGATTTCAATGCGCCTGGACTACTGCTATTTTCA
AGTGACTTAACGATCACTTATATTGATCTATTGCTCATGTCGTCTGGATTTGTGGATATTAAACCATGAAATACGCTTT
GAAAGTCCTCAAGACTTTTGCTCTGGTCTTGCAAACCTCACTCAGGCATTAAACATTAACGTTACTTGAAATATTGCCT
GGGTGGCAACTGGAGTGCTGGGCACCAGGCAGTCAGCAGTGCAATAAATTACTTTGCTTAATCTCACAAATACTGAACT
CAGCTAAGGATCCTGGGCTTCAGAAAGCAGAAAAACCCAGAGAAATTGTGTTCATCAGCCAAGAGCCCCCAGG
CommentsNo expression detected at or before stage 8.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 10
stage 10
Extraembryonic Mesoderm
Heart
Neural Plate/Tube
Pharynx
 
13-18
stage 13
Extraembryonic Mesoderm
Foregut
Head Mesenchyme
Heart
Intermediate Mesoderm
 
19-24
stage 21
stage 21
stage 22
stage 22
stage 22
Ear/Otic Placode
Eye
Forebrain
Foregut
Gut
Mesonephros
Midbrain
Myotome
Nasal Placode/Nerve
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Wing Mesenchyme
anteriorward
25
stage 25
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4907

Mouse

EmageMGI:105086
EurexpressMGI:105086
MGI GXDMGI:105086

Frog

Xenbase854771

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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