GEISHA - A Chicken Embryo Gene Expression Database
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CALD1
caldesmon 1

Gene
Official SymbolCALD1
Official Full Namecaldesmon 1
CGNC ID9884
also known ascaldesmon|CDM
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_204158
PolypeptideNP_989489
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human800ENSG00000122786MIM:114213
Mouse
Xenopus100124848963930
Zebrafish563892, 322909ZDB-GENE-090313-229, ZDB-GENE-030131-1629ZFIN:ZDB-GENE-090313-229, ZFIN:ZDB-GENE-030131-1629
Gene Ontology
Molecular Functionactin binding, calmodulin binding, myosin binding
Biological Processmuscle contraction
Cellular Componentcytoskeleton, myofibril
Links to other databases
Entrez Gene373965
Ensembl Gene
KEGGgga:373965
GEISHA IdCALD1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-CCAGTTGCTAAGGCACTACTAAC-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGGTCAGATGCTGTAAGAGATGGAAG-3'cDNA Template Length707
Complete cDNA Template Probeshow
CCAGTTGCTAAGGCACTACTAACAGTAGAATGCTTTAATACATGCTAGAGTATTATATTTAGTAATAATCATTCATAAT
TAGCCAATATCACAGCTTACAAAAGATAAAGACAAAATCACACACTTTCCTATAGTAAGATTTCATAATTGCCATTAGA
GGTATGGCAAGATAAGTATTAAAAAATTTAAATGTCAATTGCCCAGGAATGGGTAATTAAAAAGAAAGTTATAGTTTTT
AAAAGAGGAAAAGGTAAGGGTATAGAGGGTCAAAAATAAATAGGTCACTTGTATAAAACATTGTAGTTTAATTTATATA
AAACTACCATAATTAAAAAGTAAAATAAAGTAAAGCACAGTTGGAGCTTGTTTCAAATGACTGTACACTACATCTTGCC
ATTCATCAGTGCCGTACACCAGGTCCACCTACATGAAGTAAACCTCTATCTTTGTAGTGTTTCTTTTTAACTCTCTCTC
CCAAATATCTTCTTTACAGACGTTTTGATTTGTATATAGTAAACACGTGGCTATAAGATGTCAGCTTGGTTTGAATGTA
CATGCCATACGGTTTAGCATCGACATCCTACAGTGTATGGATGGCATAAACTGAGCAGCTGAAGTAGCCCCCGAGTGTG
TTGTTAACAGCTTTGTTGTGCATCGAAACTACCGGGATCTCCCGTTCAACACTTCCATCTCTTACAGCATCTGAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
stage 11
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Midbrain
Neural Plate/Tube
Somites
Unlabeled
 
13-18
stage 17
stage 18
Eye
Foregut
Head Mesenchyme
Lateral Plate Mesoderm
Outflow Tract
Pharyngeal Arches and Clefts
Sinus Venosus
Somites
 
19-24
stage 21
stage 24
Allantois
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Liver
Lung
Midbrain
Neural Plate/Tube
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Ventricles
Widespread Expression
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
Duodenum
Foregut
Leg Mesenchyme
Liver
Lung
Mesonephros
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Stomach
Ventricles
Widespread Expression
Wing Mesenchyme
 

Mouse

Emage
MGI GXD

Frog

Xenbase963930

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-090313-229, ZDB-GENE-030131-1629
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