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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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TNFRSF19
TNF receptor superfamily member 19

Gene

Official Symbol	TNFRSF19
Official Full Name	TNF receptor superfamily member 19
CGNC ID	12859
also known as	tumor necrosis factor receptor superfamily member 19, Troy-long
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001080103
Polypeptide	NP_001073572
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.10477

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	55504	ENSG00000127863		MIM:606122
Mouse	29820	ENSMUSG00000060548	All phenotypic alleles (5):Targeted, knock-out(2) Targeted, other(2) Gene trapped(1)	MGI:1352474
Xenopus	100485234			483769
Zebrafish	559725	ENSDARG00000041869	ZDB-GENE-030131-6760	ZFIN:ZDB-GENE-030131-6760

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418943
Ensembl Gene	ENSGALG00000017119
KEGG	gga:418943

Entry 1

GEISHA Id	Troy.Drew.2007	Data Source	Publication
Complete cDNA Template Probe	show CACATAACAGAGGGGTAAAGGTTTAATTGTAAGAAATGGATCCTAAAGGATTACAAGGAGAAGACAAATTGAAGATGCT TATAATCTTACTTGCATATTTGCTAAGTAGGGTAATTTGTGAGACTGGAGATTGCAGAGAACAAGAATTTAGGGACCAC GCTGGGAACTGTATTCTCTGCAAACAGTGTGGACCAGGAATGGAACTCTCAAAGGAATGCGGCTTTGGATATGGGGAGG ATGCACAGTGCATGACTTGCAGGCCAAACAGATTCAAGGAAGACTGGGGCTTTCAGAAGTGCAAGCCTTGTCTGGATTG TGCTCTAGTTAACCGCTTTCAGAAGGCCAACTGTTCTGCCACCAGCAATGCACTATGTGGAGACTGTTTACCGGGGTTT TATAGGAAGACCAAGCTTGGAGGCTTTCAAGACATGGAGTGTGTTCCCTGTGGTGATCCTCCTCCTCCCTATGAACCCC ACTGTACCACCAAAGTAAACCTTGTGAAGATCCCATCAACTGCTTCCAGTCCTCGAGACACTGCTCTAGCAGCAGTTAT ATGCAGTGCACTTGCAACAGTGCTCTTGGCTCTTCTTATTCTTTGTGTTATCTATTGCAAGAGGCAGTTTATGGAGAAG AAACCAAGCTGGTCTCTGAGATCACAAGACATTCATTACAGTGGCTCTGAATTGTCTTGTTTTGATAGACCACGGCTAA ATGAATACGACCACAGAACGTGCTGCCAGTGCCAGAGAAGCACGTCACAGACCTGTGGGCCTGTTCATTTGATTCCTTC ACTGTGTTGTGATGAAACCTGTAGCATGGAACACAGCAGTCACAGTTGTGCTTTGCAATCACAGACTACACTTAATGAA AGGACTTCTGACTCTGTTGGAGAAATGATTCCTGCCTTCCTTGGTTCTCTTTCACACTCTGCTTGTGGAGACATTTCAG ATGCTTGGCCTCTGATGCAAAACTCAGCTTGTTGTGACAGCATTTCTTTCTGTGAATCATATTCAGAACTGGCTGGGGT TGCTGCAAAATCCTGCAGTCTGGAGACTGAAAATGAAACTGCCATTGAGTCAGATAATAACCAGGAGCTAAGTGATGTA CTTACTTCAGCAAAGTCTCCTGATGGAAACATTGCAAAGTCCTTTGAAATCTCCAAGCATAGAACATATATAGAAGTTT CATCACTTCAGAACTCAGCTGCTGCTGAATCCCAGCCAAATACAAAGTGTAATGGAACAGCAGATGACTCTACAGACTG ATAAAGAGGAAAGCAA
Citation	Drew CF, Lin CM, Jiang TX, Blunt G, Mou C, Chuong CM, Headon DJ. The Edar subfamily in feather placode formation. Dev Biol. 2007 May 1;305(1):232-45. Epub 2007 Feb 16.
Copyright	Reprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
Comments	Authors said: Novel sequences have been submitted to GenBank; cTroy-long DQ360499, cTroy-short DQ360500. For ISH cTroy: codons 17257 were used for the probe. Insufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # DQ360499).

Stage

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Location (click to highlight)

Comments (click to highlight)

25-30

stage 28

stage 30

Feathers/Scutae

31-36

stage 36

Feathers/Scutae
Leg Ectoderm

Entry 2

GEISHA Id	TNFRSF19.Anderson.2020	Data Source	Direct Submission
Complete cDNA Template Probe	show CTTTTAATTCACGTCACTCTGTCCTTCTCACTGTAGCATTTTGTGTGAATTCCATATTACACGTAAAAACAGATTCCTA ACTTTTTTTAATACCTCTGAATTGAATCCTTGGAGTTCCTTGCGTGCCTAGTTCATAAATATCAACTTTCTTCCCTGTT TATTCCTTATGACTTTTATGACTGTGGTTTGTTGTAGCACTTCCTAAAAAACTGTGGATTCCGCAGCCATTTATCCCTA GCATAGTTTTAACTTCTGTGAGTAATCCCTGTAACCTCTACTGGCTCACTGCGTTCGACAGGCTCCAGCCTGCTAGTTG TGACCTCTAGCAGTCATTCTGTAGAAATTCCCGATGTGCCTTGACAAAAGCAAAGCAATCAGCAAAACAAATGCAATTT TGCATTAAATATTACTCATCTTTCTGCACGTGGTTTGTATGGCAATGGAAATGATGAGACAGTCATGTTCCATAACAGA AAGAGACTTCTTCTTTGAAGAACCCGGTGGAAGATTAACACTGTACAATGGTTAGGCTGAGTATAGGCAGCCAAAATCA ATGAGATTATTAACGTGTGCAAAAACTGTTGATTAACAGTTGTCAAATTCAAGCCAAAGGGAAGAAACTACATAAGGGG TTTATCTTAATCAATAAGTACTCCTACTTGATCTCTTATGTAGAATAGTACTCAGTTATACAAGGAATATAATTACACA ACTAAATACTGAAAAGTGTATATTCAGATACGAATAGTTTTGAATAAATTCTTTGGATACTTTCACACATTTAAGAAGT GTTGAAATATTATTTTTCACCCAGTGTGCATGAAGAGATGTGTGCTTCTTTGTAAATACTTGTAAATAGAACAAAAAAC CAATGTGCATTTCATTACACGGAAAGATCTTTTTAGAACGTGTGGATTTTTCACTTCTCATTAATAGCAGTTCTTTAAA ATGCTGTGTTCCAAACTTTTGCCAGCATCTGTCACAGTACGTATGTTTTCCCATTGCAATTTACACTTCGTATAATGTT TTTGTCCGGCAACTCCAGATAGAAGGACTCATCTTCACATGAGTGACAGATGGCTTCGGAGCAGAGTGGGAGGAAGAAT GAAAAGAGTGCTTTTCAAATATGTGTATATTGTGTATATATTTCTTTCCTTAATTTAACCAAATTGGTCTTTTTTATAT TGCCTGTGGCAAGCAATGTTGTACATGCCAATAGAAAACATACACTACCACCGCATTTTGACTGCCCACATATCACATC TAAGGACTTACAGTGCTGTTTTTAATGGTCTTTTAAAAATGTAAATTAAAACCTTGTATAAACTGCTTTGTAATACTTT TTTTGTTTTTTACTTGTGAATAAAACATTACTTGAATCGTC
Comments	Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST162f9 (GenBank: CR386946.1).