GEISHA - A Chicken Embryo Gene Expression Database
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MYF6
myogenic factor 6

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolMYF6
Official Full Namemyogenic factor 6
CGNC ID50612
also known ascMRF4, myogenic factor 6|MRF4|muscle-specific regulatory factor 4|myf-6|myogenic factor 6 (herculin)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001030746
PolypeptideNP_001025917
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.608
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human4618ENSG00000111046MIM:310200MIM:159991
Mouse17878ENSMUSG00000035923All phenotypic alleles (6):Targeted, knock-out(3) Targeted, other(3) MGI:97253
Xenopus549914, 495450, 397858998202
Zebrafish404208ENSDARG00000029830ZDB-GENE-040309-2ZFIN:ZDB-GENE-040309-2
Gene Ontology
Molecular FunctionE-box binding, protein heterodimerization activity
Biological Processmuscle cell fate commitment, muscle tissue morphogenesis, more...negative regulation of transcription, DNA-templated, positive regulation of transcription from RNA polymerase II promoter, skeletal muscle cell differentiation, somitogenesis
Cellular Componentnucleus
Links to other databases
Entrez Gene417873
Ensembl GeneENSGALG00000010936
KEGGgga:417873

Entry 1

GEISHA Idpgm2n.pk004.k4Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
CTGGGTTGCTCCTCGGGGTGTTTTTGAGCCTGCCACCCCAGCGGAGCAGGCAGAGGGGCCGAGGGACAGCATGATGATG
GACCTTTTCGAAACCGGCTCCTATTTCTTCTACTTGGACGGGGAGAATGGGGCCCTGCAGCAGCTGGAGATGGCAGAGG
GCTCGCCGCTGTACCCGGGCAGCGACGGCACCCTGTCCCCGTGTCAGGACCAACTGCCGCCGGAGGCCGGCAGCGACAG
CAGCGGCGAGGAGCACGTGCTGGCCCCGCCGGGCCTGCAGCCCCCGCACTGCCCCGGCCAGTGCCTCATCTGGGCCTGC
AAAACCTGCAAGAGAAAGTCGGCCCCCACCGACCGGCGGAAAGCGGCCACGCTGCGGGAGCGGAGGAGGCTGAAGAAGA
TCAACGAAGCCTTCGAGGCTCTGAAAAGGCGGACTGTGGCCAACCCCAACCAGCGGCTGCCCAAGGTGGAGATCCTGAG
GAGCGCCATCAGCTACATCGAGAGGCTGCAGGACCTGCTGCACAGGCTGGATCAGCAGGACAAAATGCAGGAGGTGGCG
GCGGATCCCTTCAGCTTCAGCCCCAAGCAGGGAAACGTCCCCGGCTCCGACTTCCTGAGCACCTGCGGCTCCGACTGGC
ACAGCGCTTCCGACCATTCCCGCGCGCTGGGGGGCAGCCCCAAAGCAGGGGGCTCCATGGTGGAGTCGTCGGCCTCCAG
CAGCCTGCGCTGCCTCTCCTCCATCGTGGACAGCATTTCCTCCGACGAGCCCAAGCTGCCCGGCGCGGAAGAAGCGGTG
GAAAAATGAGCGTCGCGGCGGCTCGGCCGCCTC
Commentsno expression detected stages 4-10
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 16
stage 18
Myotome
 
19-23
stage 21
stage 23
Myotome
 

Entry 2

GEISHA IdMYF6.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerAGCGACAGCAGCGGCGAG
Reverse cDNA Template PrimerAATTAACCCTCACTAAAGGAAAAAAAGGATGGGGGTGGTCTGcDNA Template Length716
Forward cDNA Template Probeshow
TTTTGATGGGTGCGGGGTCAACTTCGAGAAACAAACGGGAGATCGGTGAGGGGTGAGGAAAGAGTCCGCGCTGATCGGG
TCTCCGAGGGCCGTTCCGCCGGGGGGAGCGTGCCCCGAGGCGGCCGCGCCGCCGCGACGCTCATTTCTCCACCGCCTCT
TCCGCGCCGGGCAGCTTGGGCTCGTCGGAGGAAATGCTGTCCACGATGGAGGAGAGGCAGCGCAGGCTGCTGGAGGCCG
ACGACTCCACCATGGAGCCCCCTGCTTTGGGGCTGCCCCCCAGCGCGCGGGAATGGTCGGAAGCGCTGTGCCAGTCGGA
GCCGCAGGTGCTCAGGAAGTCGGAGCCGGGGACGTTTCCCTGCTTGGGGCTGAAGCTGAAGGGGTCCGCCGCCACCTCC
TGCATTTTGTCCTGCTGATCCAGCCTGTGCAGCAGGTCCTGCAGCCTCTCGATGTAGCTGATGGCGCTCCTCAGGATCT
CCACCTTGGGCAGCCGCTGGTTGGGGTTGGCCACAGTCCGCCTTTTCAGAGCCTCGAAGGCTTCGTTGATCTTCTTCAG
CCTCCTCCGCTCCCGCAGCGTGGCCGCTTTCCGCCGGTCGGTGGGGGCCGACTTTCTCTTGCAGGTTTTGCAGGCCCAG
ATGAGGCACTGGCCGGGGCAGTGCGGGGGCTGCAGGCCCGGCGGGGCCAGCACGTGCTCCTCGCCGCTGCTGTCGCTAA
AA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 6
Area Pellucida
Early Mesoderm
Extraembryonic Mesoderm
Headfold
Primitive Streak
 
7-12
stage 7
stage 8
stage 10
stage 11
stage 12
Blood Islands
Blood Vessels
Extraembryonic Mesoderm
Head Mesenchyme
Headfold
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Widespread Expression
 
13-18
stage 13
Blood Islands
Blood Vessels
Ear/Otic Placode
Head Mesenchyme
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Somites
Widespread Expression
Dorsal view.
25-26
stage 25
stage 25
stage 26
stage 26
Eye
Face Mesenchyme
Heart
Leg Mesenchyme
Midbrain
Midgut
Pharyngeal Arches and Clefts
Somites
Spinal Ganglia and Nerves
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.608

Mouse

EmageMGI:97253
EurexpressMGI:97253
MGI GXDMGI:97253

Frog

Xenbase998202

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040309-2
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