GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

CCNI
cyclin I

Gene
Official SymbolCCNI
Official Full Namecyclin I
CGNC ID8708
also known ascyclin-I
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_420590
PolypeptideXP_420590
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.2188
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human10983ENSG00000118816
Mouse12453ENSMUSG00000063015All phenotypic alleles (1):Targeted, other(1) MGI:1341077
Xenopus448195, 398997, 495823945653
Zebrafish406239ENSDARG00000068214ZDB-GENE-040426-2898ZFIN:ZDB-GENE-040426-2898
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422634
Ensembl Gene
KEGGgga:422634

Entry 1

GEISHA IdCCNI.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5'-CCAGAAGGCACAGATGGATAGC-3'
Reverse cDNA Template Primer5'-AATTAACCCTCACTAAAGGATGGAGGGTGGGTTACAACACG-3'cDNA Template Length798
Complete cDNA Template Probeshow
CCAGAAGGCACAGATGGATAGCGCACAGCTGATCCACTGCCGGGAGCTCGTGGCACATCACCTTTCCACTCTGCAGTCT
TCTCTGCTGCCCAATCCTGTATATGTCTACAGTCCCCTCCAGCATACCCTGGTGACCTGTAACAGAGGAGCGTTCAAAT
GCCAGCCCTCCTCTGTCCCAGGGCCAGGTTTCTCCAAGGACAACGGCAGGCCAGAAGTGCCGGTCACAGCTACAGCCGC
GCTCTACCAGCGTCTGCCAGCTCCCAGCGGTTGCAAGCAAGCCTCTGCCAAGCGCAAAGTGGAAGAGATGGAAGTGGAT
GACTTCTACGATGGAATCAAGCGTCTCTACAACGAAGACGCTGCTCCAGAGGTAGTGGCTCTCGAGAACATGGGCTCTG
TTTGCGGCGCTGACGTCTCGAGGCAGGAGGGCAACGTTTCCCCTTGTCCGCCTTTACAGCCAGTGTCCGTCATGTAGCT
GTGAGCACACACCACCTGCCGCACCGCAGCTACGCGTGCGAAGCCACGCGGAACCTGGCGTGGGGGGAGAAGGGACCAT
ACCTTGTCAGGCTGAACTGAAGGGAGCCAACAGAAAGAATATCCCAGCCCTTTCTTGAATTTTTGTTTTCTTGTGCGGC
TAATTCTAGTTCCACTATTTAAGCACTTAAAACACAAAAAAGTATAAAAATCTAAAAAAAGACCCAAAAAAAAAACCAA
ACAAAAAAAGTAGCCAGAATTTGTTTCTTTCTAGTGTTGTCAGCTCCACTGTTTTTCTGCTCCCGCGTGTTGTAACCCA
CCCTCCAT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
stage 9
stage 10
stage 10
stage 12
Neural Plate/Tube
Sinus Venosus
Unlabeled
 
13-18
stage 17
Foregut
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somites
 
19-24
stage 23
stage 23
stage 23
stage 23
stage 24
Aorta
Foregut
Head Mesenchyme
Heart
Leg Mesenchyme
Liver
Lung
Neural Plate/Tube
Notochord
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Ventricles
Wing Mesenchyme
 

Entry 2

GEISHA IdCCNI.Singh.2016Data SourcePublication
Complete cDNA Template Probeshow
CCCTGGTGACCTGTAACAGAGGAGCGTTCAAATGCCAGCCCTCCTCTGTCCCAGGGCCAGGTTTCTCCAAGGACAACGG
CAGGCCAGAAGTGCCGGTCACAGCTACAGCCGCGCTCTACCAGCGTCTGCCAGCTCCCAGCGGTTGCAAGCAAGCCTCT
GCCAAGCGCAAAGTGGAAGAGATGGAAGTGGATGACTTCTACGATGGAATCAAGCGTCTCTACAACGAAGACGCTGCTC
CAGAGGTAGTGGCTCTCGAGAACATGGGCTCTGTTTGCGGCGCTGACGTCTCGAGGCAGGAGGGCAACGTTTCCCCTTG
TCCGCCTTTACAGCCAGTGTCCGTCATGTAGCTGTGAGCACACACCACCTGCCGCACCGCAGCTACGCGTGCGAAGCCA
CGCGGAACCTGGCGTGGGGGGAGAAGGGACCATACCTTGTCAGGCTGAACTGAAGGGAGCCAACAGAAAGAATATCCCA
GCCCTTTCTTGAATTTTTGTTTTCTTGTGCGGCTAATTCTAGTTCCACTATTTAAGCACTTAAAACACAAAAAAGTATA
AAAATCTAAAAAAAGACCCAAAAA
CitationSingh PN, Ray A, Azad K, Bandyopadhyay A. A comprehensive mRNA expression analysis of developing chicken articular cartilage. Gene Expr Patterns. 2016 Jan;20(1):22-31.
CopyrightCopyright © 2015 Elsevier B.V. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Singh et al. 2016. The probe was synthesized from cDNA clone ChEST605d20.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 28
Limb Buds
 
31-38
stage 31
stage 34
stage 36
stage 38
Limb Buds
 
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.2188

Mouse

EmageMGI:1341077
EurexpressMGI:1341077
MGI GXDMGI:1341077

Frog

Xenbase945653

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040426-2898
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona