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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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MSI2
musashi RNA binding protein 2

Gene

Official Symbol	MSI2
Official Full Name	musashi RNA binding protein 2
CGNC ID	4146
also known as	RNA-binding protein Musashi homolog 2\|musashi homolog 2
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_415912
Polypeptide	XP_415912
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	39919			FBgn0260943
Human	124540	ENSG00000153944		MIM:607897
Mouse	76626	ENSMUSG00000069769	All phenotypic alleles (2):Targeted, other(1) Gene trapped(1)	MGI:1923876
Xenopus	100038158, 399260			488851
Zebrafish	394084, 100002680	ENSDARG00000032614, ENSDARG00000033901	ZDB-GENE-040426-1268, ZDB-GENE-030826-25	ZFIN:ZDB-GENE-040426-1268, ZFIN:ZDB-GENE-030826-25

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	417667
Ensembl Gene
KEGG	gga:417667

Entry 1

GEISHA Id	MSI2.Anderson.2022	Data Source	Publication
Complete cDNA Template Probe	show GAGGACGCCATGCTTATGTTTGACAAGACGACCAACAGGCATAGAGGATTTGGCTTCGTTACTTTTGAAAACGAAGACG TGGTGGAAAAAGTCTGCGAAATCCACTTCCACGAAATCAATAACAAGATGGTAGAATGTAAGAAAGCACAACCTAAAGA AGTGATGTTTCCACCAGGGACGAGAGGAAGGGCGCGCGGATTGCCGTACACCATGGACGCTTTTATGCTGGGGATGGGA ATGTTGGGTTACCCGAATTTTGTCGCGACGTATGGCCGAGGTTATCCTGGATTTGCCCCAAGTTACAGCTATCAGTTTC CAGGTTTTCCGGCAGCAGCCTACGGACCAGTAGCAGCGGCAGCCGTGGCGGCAGCAAGAGGATCAGTCTTGAATAGCTA CAGTGCTCAACCGAATTTTGGCGCACCCGCTTCCCCGGCAGGCTCCAACCCAGCCCGGCCCGGAGGCTTCCCTGGGGCC AACAGCCCTGGGCCCGTCGCAGACCTCTACGGCACAGCCAGCCAGGACTCCGGCGTCGGCAACTACATAAGTGCTGCCA GCCCACAGCCGGGCTCCGGCTTCAGCCACGGGATCGCCGGACCTTTGATTGCAACGGCTTTTACAAATGGATACCATTG AAACGTTACACATGGTTGGTTGCCATCTCACTTGGAGAGTCTCTCTGGATGTCCGGGCAAAACAGGGCGAAAGTTTCTG AGCGGTCCCACGGTGAGGGTGACCATCATCAGACTTCAGCACTACATCTTCACCAACAGCAAACGACCTGGAGGTGGCA CTCGACGGACTCGGGCTGGTTTTAAAAAATCTCTCTCATCATTCTCATGA
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST593o8. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 11

Atria
Eye
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Pharynx
Sinus Venosus
Somites
Ventricles

stage 13

Atria
Dermomyotome
Ectoderm
Endoderm
Eye
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Crest
Neural Plate/Tube
Notochord
Pharynx
Sclerotome
Sinus Venosus
Somatic Mesoderm
Somites
Spinal Cord
Splanchnic Mesoderm
Ventricles

Entry 2

GEISHA Id	MSI2.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show GAGGACGCCATGCTTATGTTTGACAAGACGACCAACAGGCATAGAGGATTTGGCTTCGTTACTTTTGAAAACGAAGACG TGGTGGAAAAAGTCTGCGAAATCCACTTCCACGAAATCAATAACAAGATGGTAGAATGTAAGAAAGCACAACCTAAAGA AGTGATGTTTCCACCAGGGACGAGAGGAAGGGCGCGCGGATTGCCGTACACCATGGACGCTTTTATGCTGGGGATGGGA ATGTTGGGTTACCCGAATTTTGTCGCGACGTATGGCCGAGGTTATCCTGGATTTGCCCCAAGTTACAGCTATCAGTTTC CAGGTTTTCCGGCAGCAGCCTACGGACCAGTAGCAGCGGCAGCCGTGGCGGCAGCAAGAGGATCAGTCTTGAATAGCTA CAGTGCTCAACCGAATTTTGGCGCACCCGCTTCCCCGGCAGGCTCCAACCCAGCCCGGCCCGGAGGCTTCCCTGGGGCC AACAGCCCTGGGCCCGTCGCAGACCTCTACGGCACAGCCAGCCAGGACTCCGGCGTCGGCAACTACATAAGTGCTGCCA GCCCACAGCCGGGCTCCGGCTTCAGCCACGGGATCGCCGGACCTTTGATTGCAACGGCTTTTACAAATGGATACCATTG AAACGTTACACATGGTTGGTTGCCATCTCACTTGGAGAGTCTCTCTGGATGTCCGGGCAAAACAGGGCGAAAGTTTCTG AGCGGTCCCACGGTGAGGGTGACCATCATCAGACTTCAGCACTACATCTTCACCAACAGCAAACGACCTGGAGGTGGCA CTCGACGGACTCGGGCTGGTTTTAAAAAATCTCTCTCATCATTCTCATGA
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.