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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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PGGHG
protein-glucosylgalactosylhydroxylysine glucosidase

Gene

Official Symbol	PGGHG
Official Full Name	protein-glucosylgalactosylhydroxylysine glucosidase
CGNC ID	3111
also known as	ATHL1, protein-glucosylgalactosylhydroxylysine glucosidase\|ATH1, acid trehalase-like 1\|acid trehalase-like protein 1, ATH1, CATH1, acid trehalase-like 1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_420923
Polypeptide	XP_420923
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.37280

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	34607			FBgn0032387
Human	80162	ENSG00000142102
Mouse	212974	ENSMUSG00000062031	All phenotypic alleles (1):Targeted, other(1)	MGI:2444047
Xenopus	100496278			6045819
Zebrafish	777617	ENSDARG00000014311	ZDB-GENE-061103-319	ZFIN:ZDB-GENE-061103-319

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	422991
Ensembl Gene
KEGG	gga:422991

Entry 1

GEISHA Id	ATh1.Chesnutt.2004	Data Source	Publication
Complete cDNA Template Probe	show ATGAGCATGAGAGGTTCGGGTAAGGACCCCGCTGTGTTCACCTCCACTTGCTTGCCCTCAGACTCACGGCTCCTTGCCA CGGTGACCAATGCTTACCTGGGCACACGTGTGTACCGCAACATCCTCCATGTCAGTGGGGTGTACAATGGGGCGGCGGG GGACACGCACCGTGCTGACATCCCCAGCCCGGTCAATGTGAGGATGACAGTGCCCGATGGGGATGTGCCTGTTGAGACC TTCACCTTGAACACGCGGACAGGAACCTTCAGCCATAAGCTCGAGTCATCCAGTTATACAGCCACGCACCAGATCTATG CTCACCATTCCCTCGTCCACCTGATGGCCTTCAGCATCACCATCTGGCGATCAGCTGGCACCAGCCAGCCCATCACCGT GCAGCTCCAGGCTCCTTTTGTGCCAAAGAGCCAGGACTTGGACCTGCAGCAAGGACCAGACTTCCAGGGAGCACATTAC ATCTACGGGCAGACGCTGGTTCCTGAGGTGGAGGGGGGACCCCAGCCCACCGTGCACATGCTCTGGACTCCTGTCCCAC AAGCTGTCACCTTGCATGAGGAGGAGCAGGAACGACGCTGGGAGTTCCTGACGGCTGTGGCTGAGAGTGAGGAGGAGGC CAAGAGGAGCTACAGCGAAGGGCTGGCACGCATGGCCGCTGGCTCCCTGCACTCCTCTCATACCCGTGCCTGGGCTGCT CTGTGGAGAGGGTGCTGTGTGGACCTGGAAGGCCCACTGCCTTTGAGACAGGCCCTCTATGGGTGTCTCTATTACCTGC TGAGTGCCATCCCCCCCCAAGGTACACCGGGATTCCACTTTCATGGCATCAGCCCTGGTGGCTTGTCCAATGGCACACG GGGCGAGGACTACTGGGGACACGTCTTCTGGGATCAGGACACCTGGATATTCCCAAACATCCTGCTGTTTTATCCCGAA GCCGCCCGAGCCATCTTGGAGTACCGGATTCGCACTCTGGAAGGAGCTCTACTCAATGCGCAGGAGCAAGGCTACAAGG GTGCCAAGTTCCCATGGGAGAGTGCAGCTACTGGCCGGGAGGTCTGTCCTGAGGACATTTATGGAGCCCAAGAAATTCA CATCACCGGGGATGTTCTGATGGCCTTTGAGCAGTATTATCATACCACGCAGGACCAGAAGCTGTTCAGGACAGATGGA GGCTGGGAGCTGGTGAGTGCCGTGGCTCAGTACTGGTGCAGCAGGATGGTGTGGAGTGAGGAGGAGCAATGCTATCACA TCCGAGGTGTCATGCCCCCAGATGAGTATCACTACCAGGTTGATAACTCTGCTTACACCAACGCCGTGGCACAGCGGAG CTTAAATTTTGCAGCCAGTGTTGCTAGGGACTTCTTTATCCCTGTGCCAGAGGAGTGGGTGGAATGTGCGAAGAAAGTC AAAGTGCCCTTTGATGCGGTGCGGAAATATCACCCTGAGTATGACGGTTACAGTCCAGGTGAGCCTGTGAAACAAGCTG ATGTTGTCCTGCTGGGCTTCCCTCTGATGCACCCCATGCACCCTGAAGTGCGGAGGAATGACCTGGTGATGTACGAGCC GGTCACTGAGCTGAGCGGGCCAGCCATGACCTGGAGCATGTTTGCGGTGGGCTGGCTGGAGCTGAAGGAGACCCAGAGA GCACAGGGCCTACTGAACAAGTGTTTCAGCAACATCACTGAGCCCTTCAAGATCTGGGTGGAGAACTCGGATGGGTCAG GAGCTGTGAACTTCTTGACAGGAATGGGCGGATTCTTGCAGGCTGTCCTCTTTGGTTACACAGGGTTCAGGATCACAAA GACCAACCTCCGCTTTGACCCTGCATTTCCCAGTGATGTCAGCAAGCTGGAAGTCACTGGCGTCTCCTACTTGGGCAGC AAGCTGAAGTTCAGCATCACCAAGGAGAAGATGAGGATTGCAGTGACTAAGTGTCCCCTTCACCCTCCCCTGGAGGCAG TGCTGGAGGAGTCTGGGCAGCGCTTTCCTCTTCATGAAGGGCAGAGCATCTCCTTCCCCACAGCAGCTGGATGCATCCA GAAGGCCCCCAGCGAAGGACTTTGAACCTCACGGGTCTGGGTTTTGCATGATGGGCATCAAACCCACCCGTCCTGATGC GCGGACATCCTGCACCATCCCCTTCTTGGATATGAATGTGCTGAGGCTGCCAAGGGAACGCCCTGCTCTGTTAATTGTG AGTGCGAGCATTGCTTCTGCTGCAGGACTCACAGCACTGGGAAGTGGGAGGAGCACAAACAAAGCCAAGTGCCTGAAAG TGATTAACTCAGATGCGTTTCCTAAACATCCCCCATTTGTTTATTCATGAAAGATCTCCATTTCTACAGCAGCCTCCAG ATGCGCAGAGCTCTGTGTTCAGCCCTGGATGCCCCGCTCCACTCCTCCTGCTCTCAAGTTTTATAGGGCTTTGGAGGCA GTGTGGACAACAGCAAGGCTGAAGCTGGGTGTTATTCTGGCCCTGTGGGTTCAGGGCTGCATTCCCCAGCCTCACGCGT TGGTTCGAGCAAGGGGAAGGAAGGGTGCTCCCTGCTCTGCTCTGTAAGCCAATTCCAGGAGTTTATAAAAAGCCCTGTG GCTG
Citation	Chesnutt C, Burrus LW, Brown AM, Niswander L. Coordinate regulation of neural tube patterning and proliferation by TGFbeta and WNT activity. Dev Biol. 2004 Oct 15;274(2):334-47.
Copyright	Reprinted from Developmental Biology, Volume 274, Issue 2, Catherine Chesnutt, Laura W. Burrus, Anthony M.C. Brown, and Lee Niswander, Coordinate regulation of neural tube patterning and proliferation by TGFβ and WNT activity, Pages 334-347, Copyright 2004, with permission from Elsevier. Copyright © 2004 Elsevier B.V. All rights reserved.
Comments	Authors said aTH1 from Gowan et al., 2001, who said "antisense probes were made from plasmids containing the coding regions of these genes." As information provided is insufficient to verify exact sequence used to synthesize the probe, the sequence below was obtained from NCBI (Acc# XM_420923.2).

Stage

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13-14

stage 14

Neural Plate/Tube

Entry 2

GEISHA Id	ATH1.LeDréau.2012	Data Source	Publication
Complete cDNA Template Probe	show ATGAGAGGTTCGGGTAAGCTCTGGCTGGTGATGGCTGATGGCCAGGAGGACCCCGCTGTGTTCACCTCCACTTGCTTGC CCTCAGACTCACGGCTCCTTGCCACGGTGACCAATGCTTACCTGGGCACACGTGTGTACCGCAACATCCTCCATGTCAG TGGGGTGTACAATGGGGCGGCGGGGGACACGCACCGTGCTGACATCCCCAGCCCGGTCAATGTGAGGATGACAGTGCCC GATGGGGATGTGCCTGTTGAGACCTTCACCTTGAACACGCGGACAGGAACCTTCAGCCATAAGCTCGAGTCATCCAGTT ATACAGCCACGCACCAGATCTATGCTCACCATTCCCTCGTCCACCTGATGGCCTTCAGCATCACCATCTGGCGATCAGC TGGCACCAGCCAGCCCATCACCGTGCAGCTCCAGGCTCCTTTTGTGCCAAAGAGCCAGGACTTGGACCTGCAGCAAGGA CCAGACTTCCAGGGAGCACATTACATCTACGGGCAGACGCTGGTTCCTGAGGTGGAGGGGGGACCCCAGCCCACCGTGC ACATGCTCTGGACTCCTGTCCCACAAGCTGTCACCTTGCATGAGGAGGAGCAGGAACGACGCTGGGAGTTCCTGACGGC TGTGGCTGAGAGTGAGGAGGAGGCCAAGAGGAGCTACAGCGAAGGGCTGGCACGCATGGCCGCTGGCTCCCTGCACTCC TCTCATACCCGTGCCTGGGCTGCTCTGTGGAGAGGGTGCTGTGTGGACCTGGAAGGCCCACTGCCTTTGAGACAGGCCC TCTATGGGTGTCTCTATTACCTGCTGAGTGCCATCCCCCCCCAAGGTACACCGGGATTCCACTTTCATGGCATCAGCCC TGGTGGCTTGTCCAATGGCACACGGGGCGAGGACTACTGGGGACACGTCTTCTGGGATCAGGACACCTGGATATTCCCA AACATCCTGCTGTTTTATCCCGAAGCCGCCCGAGCCATCTTGGAGTACCGGATTCGCACTCTGGAAGGAGCTCTACTCA ATGCGCAGGAGCAAGGCTACAAGGGTGCCAAGTTCCCATGGGAGAGTGCAGCTACTGGCCGGGAGGTCTGTCCTGAGGA CATTTATGGAGCCCAAGAAATTCACATCACCGGGGATGTTCTGATGGCCTTTGAGCAGTATTATCATACCACGCAGGAC CAGAAGCTGTTCAGGACAGATGGAGGCTGGGAGCTGGTGAGTGCCGTGGCTCAGTACTGGTGCAGCAGGATGGTGTGGA GTGAGGAGGAGCAATGCTATCACATCCGAGGTGTCATGCCCCCAGATGAGTATCACTACCAGGTTGATAACTCTGCTTA CACCAACGCCGTGGCACAGCGGAGCTTAAATTTTGCAGCCAGTGTTGCTAGGGACTTCTTTATCCCTGTGCCAGAGGAG TGGGTGGAATGTGCGAAGAAAGTCAAAGTGCCCTTTGATGCGGTGCGGAAATATCACCCTGAGTATGACGGTTACAGTC CAGGTGAGCCTGTGAAACAAGCTGATGTTGTCCTGCTGGGCTTCCCTCTGATGCACCCCATGCACCCTGAAGTGCGGAG GAATGACCTGGTGATGTACGAGCCGGTCACTGAGCTGAGCGGGCCAGCCATGACCTGGAGCATGTTTGCGGTGGGCTGG CTGGAGCTGAAGGAGACCCAGAGAGCACAGGGCCTACTGAACAAGTGTTTCAGCAACATCACTGAGCCCTTCAAGATCT GGGTGGAGAACTCGGATGGGTCAGGAGCTGTGAACTTCTTGACAGGAATGGGCGGATTCTTGCAGGCTGTCCTCTTTGG TTACACAGGGTTCAGGATCACAAAGACCAACCTCCGCTTTGACCCTGCATTTCCCAGTGATGTCAGCAAGCTGGAAGTC ACTGGCGTCTCCTACTTGGGCAGCAAGCTGAAGTTCAGCATCACCAAGGAGAAGATGAGGATTGCAGTGACTAAGTGTC CCCTTCACCCTCCCCTGGAGGCAGTGCTGGAGGAGTCTGGGCAGCGCTTTCCTCTTCATGAAGGGCAGAGCATCTCCTT CCCCACAGCAGCTGGATGCATCCAGAAGGCCCCCAGCGAAGGACTTTGAACCTCACGGGTCTGGGTTTTGCATGATGGG CATCAAACCCACCCGTCCTGATGCGCGGACATCCTGCACCATCCCCTTCTTGGATATGAATGTGCTGAGGCTGCCAAGG GAACGCCCTGCTCTGTTAATTGTGAGTGCGAGCATTGCTTCTGCTGCAGGACTCACAGCACTGGGAAGTGGGAGGAGCA CAAACAAAGCCAAGTGCCTGAAAGTGATTAACTCAGATGCGTTTCCTAAACATCCCCCATTTGTTTATTCATGAAAGAT CTCCATTTCTACAGCAGCCTCCAGATGCGCAGAGCTCTGTGTTCAGCCCTGGATGCCCCGCTCCACTCCTCCTGCTCTC AAGTTTTATAGGGCTTTGGAGGCAGTGTGGACAACAGCAAGGCTGAAGCTGGGTGTTATTCTGGCCCTGTGGGTTCAGG GCTGCATTCCCCAGCCTCACGCGTTGGTTCGAGCAAGGGGAAGGAAGGGTGCTCCCTGCTCTGCTCTGTAAGCCAATTC CAGGAGTTTATAAAAAGCCCTGTGGCTG
Citation	Le Dréau G, Garcia-Campmany L, Rabadán MA, Ferronha T, Tozer S, Briscoe J, Martí E. Canonical BMP7 activity is required for the generation of discrete neuronal populations in the dorsal spinal cord. Development. 2012 Jan;139(2):259-68.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # XM_420923.3).