GEISHA - A Chicken Embryo Gene Expression Database
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HS3ST1
heparan sulfate-glucosamine 3-sulfotransferase 1

Gene
Official SymbolHS3ST1
Official Full Nameheparan sulfate-glucosamine 3-sulfotransferase 1
CGNC ID11086
also known asheparan sulfate glucosamine 3-O-sulfotransferase 1|heparan sulfate (glucosamine) 3-O-sulfotransferase 1|heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_420786
PolypeptideXP_420786
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.7526
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human9957MIM:603244
Mouse15476ENSMUSG00000051022All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1201606
Xenopus496940, 3989715855726
Zebrafish565201ENSDARG00000012249ZDB-GENE-070202-1ZFIN:ZDB-GENE-070202-1
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene422840
Ensembl GeneENSGALG00000014934
KEGGgga:422840
GEISHA IdHS3ST1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCCCATTACCTGCTTGAGTGAAACC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGACTTGCCACAGATGAGTGCCAGcDNA Template Length1003
Forward cDNA Template Probeshow
TCTTCCACAGCTCAAAAAATTTCTTGTTGGGCTCATAGAAATACTCATGCAGTTTCTCAAGGTAACCGAGTATCTACTT
GTGGGTGAGCTCGTCCTTTTGACTCGTGTAAACAGCGCTCCCTCCCACTGTCCCTTAGGCAGTAGAAGCCTTTAGTTTT
ATTGAAATAAAAGTTTGAAGCATTTATCTGTGGTGATAATTTCAAAAATCTCTCTACCTTCTCTATTTCTGGAAAGGGA
TCTTTGATTAGTTTATCCCCATCTACAATGTGGATATGATCAAGGGGAAAATACTTCAACCAGTTCTGCATGTGAATGT
AGTATAAGCTTCTGTTTATTGCCTTGTAGTCCACATTGAGTTCACCATCTTTAATCAGGAACTGTTCAATGGAGGGATA
CGGCTTGTGCTTTTGCATGTGGTTATAGAACACTTGGGTGTAATCTGACAGTACTCTCTCACTTGGGTCTCTTAAAATA
AGGAGTAATCTCATAGATTGGTTCATGTTATAAACTCTTTCAGGCACTTCAGGTGATGTGAAATATGCTGGAGTTTTTT
CCACTGTGATCTGATGGGGATAAGAGAATGGCATTTGATTAATATACCATTGCAATCCATTTCTATAATGATCTTCCCA
GTCAAAGAAGTGGACTTCACTTTCTGCTGCTGCAATATCAGGATGAAGACTCAGCATCTCCAACAAAGCTCTTGTTCCA
CCTTTCCTCACTCCAATAATGATAGTCTGTGGCAGCTGCCGGCATGATCCATTAGAATGAATGTTTTCCTTGAAGTCAT
TTTTCTGAGATGTTTTCTTTAAAAGCTCTCTCTGAGCAGACTGAGCAGAAGTCTCAGCCTTTGAATTTATAGCCGGTCT
AGAAGGCACTATCTGAGGTTGAACAATGAGCAGCACAGCTCCCAGCANAAAAGCTGCCATGACAGAACTTCTTTAGTCT
GGTTTCACTCAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Unlabeled
 
7-12
stage 7
stage 8
stage 8
stage 10
stage 11
stage 12
stage 12
Ear/Otic Placode
Endoderm
Extraembryonic
Hindbrain
Neural Plate/Tube
Pharynx
Spinal Cord
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm
 
13-18
stage 18
stage 18
Foregut
Heart
Notochord
Outflow Tract
Sclerotome
Sinus Venosus
Ventricles
 
19-24
stage 24
Head Mesenchyme
Leg Mesenchyme
Wing Mesenchyme
 
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Foregut
Hindbrain
Leg Mesenchyme
Mesonephros
Midbrain
Neural Plate/Tube
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.7526

Mouse

EmageMGI:1201606
EurexpressMGI:1201606
MGI GXDMGI:1201606

Frog

Xenbase5855726

Fruit Fly

BDGP

Zebra Finch

ZEBrAHS3ST1

Zebrafish

ZFINZDB-GENE-070202-1
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