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TFEB
transcription factor EB

Gene

Official Symbol	TFEB
Official Full Name	transcription factor EB
CGNC ID	2479
also known as	transcription factor EB, Tfe3, Tfeb
gene type	protein-coding

Genomic Map

Sequence Information

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4364

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	7942	ENSG00000112561		MIM:600744
Mouse	21425	ENSMUSG00000023990	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(2) Gene trapped(1)	MGI:103270
Xenopus	780105			982674
Zebrafish	562289		ZDB-GENE-090807-3	ZFIN:ZDB-GENE-090807-3

Gene Ontology

Links to other databases

GEISHA Id	pgp2n.pk009.a14	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GGCCGCCCCGCGCTGCCGCCCCGCGGGGTTCCGCGTTCCCTCCGCCCGCAGCCGCGGGGGTCACCTCCGTGCCTGGCCT GCGTCCCACTGCCCCACTGCACCATGGCGTCCCGCATCGGGCTGCGGATGGAGCTGATGAAGCAGCAAGCACAGCAGGA GGCCGAGCGGGAGCGCGCGCAGCAGCAGCTGATGATGAACTACATGCAGCAGCAGCGCATGCCTGTGGCCTCCAGCCCT GCCATCAACACCCCCATCCATTACCAGTCCCCACCGCCCGTGCCTGGAGAGGTCCTCAAGGTGCAGTCCTACCTGGAGA ACCCCACCACCTACCACCTGCAGAAGTCGCGGGATAAGAAGGTTCAGGCGTATCTCTCCGAGACCTATGGGAACAAGTT TGCTGCCCACGTCAGCCCTGCCAGCCACTCGCCAAAGCCACCCCCAGCTGTGTCCCCCAGTGTCCGGCCCGGCCACGTC ATGTCCTCCTCGGCGGGCAACAGCGCACCCAACAGCCCCATGGCCATGCTCAACATCGGCTCCAACCCTGAGCGGGAGT TTGATGAGGTCATCGATGACATCATGCGCCTGGATGATGTTCTGGGCTATATGAACCCCGAAGTCCACATGCCCAACAC ACTNNNGATGTCCAGCAGTCACATGAATGTCTATAGT
Comments	Probe sequence not yet determined, this sequence from Udel. No specific expression detected for stages 4-18.

Stage

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stage 19

GEISHA Id	TFEB.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	CCATCAACACCCCCATCCATTAC
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGATTCAATAGGACATCCCCTCTCGTG	cDNA Template Length	1779
Forward cDNA Template Probe	show AAGATGCGCTCCCAGCTCAGAGCATAGCGTGGTGTTTCAGGGCAGAGGCACTTCTGTGGGGTGGAGGAGGATGGACATG GTGCTGCCGGACCTCCAGGACACCGAAGCAACAAAATTCAATAGGACNTCCCNTCTCTTGCCCCGGNANTTTGCTTGCT CCNNTGGAANCNCCNNTTCTCCCCNNTGCCNTGNAAAGGCANTGGCAGGAGNAAACCCACCAGGNAATTGACNCTGTNA CAAANCCNTCGNTGGCNNTGCAGGGAANTANTGGAAGGGGNCACCAAGGCAAAAANNTNTNACCNTCNCNCCCAGGACT TGAANNTCCTTGNTCCAANCCNTGCACAGGAANCACATTGGGAACCCTTTGGAAGGCAAACCACCCAAANTCNTGNTGC NTGGNTGGAAAANNTNCANCCAGGCCAACNCCNCGGCAANCCAAAAAGNTCACNTCCANNTNTGGNCAACAAAAAANNT TGCAAAAAACTTGNTGTTACCCGGCAANCNTTNAACCAAAACCCCCTTTNCNTAAAAAAANTNTANTCNTATNTAAATT CAATTGNTCACCAGNACGGNNTCNTCCCCCGGAAGNAAAATTGCCNTNTNANTTCANTAACCAAANTTNAAGGCCCATT CNTCNCCCCCANCNCGGNCNCACNTCNTCTTCANACCNTNTNTNCTTCNTCCATGNTNAACNTNNTCCGGCAANTGNTG NCNTTGAAGGCNTCGGGGAACACGNCCAAAAACAGGGGTTCGAAGGCCAGGGNCACCATGTTNTCTTGCANCANCNTCA ATTCCANNTCTTTNTTGAATAGGNAAGGNAANGAAACCAA