GEISHA - A Chicken Embryo Gene Expression Database
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NKX1-1
NK1 homeobox 1

Gene
Official SymbolNKX1-1
Official Full NameNK1 homeobox 1
CGNC ID56932
also known asNK1 transcription factor-related protein 1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_001234891
PolypeptideXP_001234892
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human54729ENSG00000235608
Mouse672284All phenotypic alleles (1):Targeted, other(1) MGI:109346
Xenopus100493120488878
Zebrafish407077ENSDARG00000012697ZDB-GENE-040615-2ZFIN:ZDB-GENE-040615-2
Gene Ontology
Molecular Functionsequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Processmulticellular organismal development
Cellular Componentnucleus
Links to other databases
Entrez Gene771636
Ensembl Gene
KEGGgga:771636

Entry 1

GEISHA IdSAX1.DiezdelCorral.2002Data SourcePublication
Complete cDNA Template Probeshow
ATGGACAGCCATGGGGAGCAGCGGCTGTCGGCCGGCGGAGAGCTGCCGCTCTACTCCTGCCCTGGGAATAGGGACAGAC
AAGGGGACAGCCAGAGCAACACTCCCGGACAAGAGGGGGCAGTGGCCGCGCTGCCCATAGTGCACAGAACCACCTCCTT
CTCCGTGCTCGACATACTGGACCCTAACAAATTCAACAGCAAAAGGAGGCAATGCGCGGTCTTGTACAAATCGGTGGCG
ACCGAGTTCACGCTGGGGGCGGAGGATAAGCCCGAGGACTCAGGGACGGAGCTGGCCGAGCCAAAAGCTCTCGCCGAAG
ATTTCGACACGTGCAAGAAGTCCGCAGAGCTGATCAAGGACGGCGAGCTCTACAAGGCCGAGGAGTGCGACCTGGACTA
CAGCAGCCGGCCGAGCCGCAGCCCCGACAGCGAGCTGCAGGACGACGAGGAGCTGTGCAGCGAGGAGAGCAGCAGCAGC
GGCAGCACCGGCAGCGGCTCGGCGGCTCCCGGCGAGGCCGAGGCGGGCCCGCAGCACTCCGAGGCTCCCGAGGCGCAGC
CGCCGCCGCCCCAGCAGCCCGGCGGAGGGCAGCAGCAGGCCAAGCCCAAGAGGAAGCGCACGGGCTCGGACTCCAAGTC
GGGCAAACCCCGGCGGGCGCGGACAGCTTTCACCTACGAGCAGCTGGTGGCGCTGGAGAACAAGTTCAAGTCCACGCGG
TACCTGTCGGTGTGCGAGCGCCTCAACCTGGCGCTCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGA
ACCGCCGCACCAAGTGGAAGAAGCAGAACCCGGGCGCCGACACCAGCGCGCCCACCGGCGGCGGCGGGGCGGGCGGCGG
GGCGGGCGGGGCGCTGGGCGGAGGGGCGCTGCCGGGCGGCCTCAGCCCGCTCAGCCACTCGCCGCCCATGGGCAACCCG
CTGTCCATGCACGGGCCCGGCAGCTACGCGGGTCACCCGGCCGGGGGGTTGGTGTGCGCCGCCCAGCTGCCCTTCCTGC
CCAGCCCAGCCGTCCTCTCGCCCTTCGTGCTGGGCTCGCAGACTTACGGCGCTCCGGCTTTCTACACCCCTCACCTATA
A
CitationDiez del Corral R, Breitkreuz DN, Storey KG., Onset of neuronal differentiation is regulated by paraxial mesoderm and requires attenuation of FGF signalling. Development. 2002 Apr;129(7):1681-91.
CopyrightPublished by The Company of Biologists 2007. This material is protected by a copyright retained by the authors. Permission granted by Dr. Storey
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc #XM_001234891.2)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-9
stage 9
stage 9
Neural Plate/Tube
 

Entry 2

GEISHA IdSAX1.Schubert.2005Data SourcePublication
Complete cDNA Template Probeshow
ATGGACAGCCATGGGGAGCAGCGGCTGTCGGCCGGCGGAGAGCTGCCGCTCTACTCCTGCCCTGGGAATAGGGACAGAC
AAGGGGACAGCCAGAGCAACACTCCCGGACAAGAGGGGGCAGTGGCCGCGCTGCCCATAGTGCACAGAACCACCTCCTT
CTCCGTGCTCGACATACTGGACCCTAACAAATTCAACAGCAAAAGGAGGCAATGCGCGGTCTTGTACAAATCGGTGGCG
ACCGAGTTCACGCTGGGGGCGGAGGATAAGCCCGAGGACTCAGGGACGGAGCTGGCCGAGCCAAAAGCTCTCGCCGAAG
ATTTCGACACGTGCAAGAAGTCCGCAGAGCTGATCAAGGACGGCGAGCTCTACAAGGCCGAGGAGTGCGACCTGGACTA
CAGCAGCCGGCCGAGCCGCAGCCCCGACAGCGAGCTGCAGGACGACGAGGAGCTGTGCAGCGAGGAGAGCAGCAGCAGC
GGCAGCACCGGCAGCGGCTCGGCGGCTCCCGGCGAGGCCGAGGCGGGCCCGCAGCACTCCGAGGCTCCCGAGGCGCAGC
CGCCGCCGCCCCAGCAGCCCGGCGGAGGGCAGCAGCAGGCCAAGCCCAAGAGGAAGCGCACGGGCTCGGACTCCAAGTC
GGGCAAACCCCGGCGGGCGCGGACAGCTTTCACCTACGAGCAGCTGGTGGCGCTGGAGAACAAGTTCAAGTCCACGCGG
TACCTGTCGGTGTGCGAGCGCCTCAACCTGGCGCTCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGA
ACCGCCGCACCAAGTGGAAGAAGCAGAACCCGGGCGCCGACACCAGCGCGCCCACCGGCGGCGGCGGGGCGGGCGGCGG
GGCGGGCGGGGCGCTGGGCGGAGGGGCGCTGCCGGGCGGCCTCAGCCCGCTCAGCCACTCGCCGCCCATGGGCAACCCG
CTGTCCATGCACGGGCCCGGCAGCTACGCGGGTCACCCGGCCGGGGGGTTGGTGTGCGCCGCCCAGCTGCCCTTCCTGC
CCAGCCCAGCCGTCCTCTCGCCCTTCGTGCTGGGCTCGCAGACTTACGGCGCTCCGGCTTTCTACACCCCTCACCTATA
A
CitationSchubert FR, Lumsden A. Transcriptional control of early tract formation in the embryonic chick midbrain. Development. 2005 Apr;132(8):1785-93. Epub 2005 Mar 16.
Copyrightcopyright 2005 by the authors. Published by the Company of Biologists Ltd.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #XM_001234891.2 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 17
stage 18
Mesencephalon
Midbrain
 
19-24
stage 19
stage 20
stage 21
stage 21
stage 21
stage 22
stage 23
Mesencephalon
double labeled
25-27
stage 25
stage 25
stage 27
stage 27
Diencephalon
Mesencephalon
Midbrain
Rhombomeres
 

Entry 3

GEISHA IdSAX1.Bertrand.2000Data SourcePublication
Complete cDNA Template Probeshow
ATGGACAGCCATGGGGAGCAGCGGCTGTCGGCCGGCGGAGAGCTGCCGCTCTACTCCTGCCCTGGGAATAGGGACAGAC
AAGGGGACAGCCAGAGCAACACTCCCGGACAAGAGGGGGCAGTGGCCGCGCTGCCCATAGTGCACAGAACCACCTCCTT
CTCCGTGCTCGACATACTGGACCCTAACAAATTCAACAGCAAAAGGAGGCAATGCGCGGTCTTGTACAAATCGGTGGCG
ACCGAGTTCACGCTGGGGGCGGAGGATAAGCCCGAGGACTCAGGGACGGAGCTGGCCGAGCCAAAAGCTCTCGCCGAAG
ATTTCGACACGTGCAAGAAGTCCGCAGAGCTGATCAAGGACGGCGAGCTCTACAAGGCCGAGGAGTGCGACCTGGACTA
CAGCAGCCGGCCGAGCCGCAGCCCCGACAGCGAGCTGCAGGACGACGAGGAGCTGTGCAGCGAGGAGAGCAGCAGCAGC
GGCAGCACCGGCAGCGGCTCGGCGGCTCCCGGCGAGGCCGAGGCGGGCCCGCAGCACTCCGAGGCTCCCGAGGCGCAGC
CGCCGCCGCCCCAGCAGCCCGGCGGAGGGCAGCAGCAGGCCAAGCCCAAGAGGAAGCGCACGGGCTCGGACTCCAAGTC
GGGCAAACCCCGGCGGGCGCGGACAGCTTTCACCTACGAGCAGCTGGTGGCGCTGGAGAACAAGTTCAAGTCCACGCGG
TACCTGTCGGTGTGCGAGCGCCTCAACCTGGCGCTCTCGCTCAGCCTCACCGAGACGCAGGTGAAGATCTGGTTCCAGA
ACCGCCGCACCAAGTGGAAGAAGCAGAACCCGGGCGCCGACACCAGCGCGCCCACCGGCGGCGGCGGGGCGGGCGGCGG
GGCGGGCGGGGCGCTGGGCGGAGGGGCGCTGCCGGGCGGCCTCAGCCCGCTCAGCCACTCGCCGCCCATGGGCAACCCG
CTGTCCATGCACGGGCCCGGCAGCTACGCGGGTCACCCGGCCGGGGGGTTGGTGTGCGCCGCCCAGCTGCCCTTCCTGC
CCAGCCCAGCCGTCCTCTCGCCCTTCGTGCTGGGCTCGCAGACTTACGGCGCTCCGGCTTTCTACACCCCTCACCTATA
A
CitationBertrand N, Médevielle F, Pituello F FGF signalling controls the timing of Pax6 activation in the neural tube. Development. 2000 Nov;127(22):4837-43.
Copyrightcopyright held by the authors. Published by the Company of Biologists, Ltd.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_001234891.2
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Neural Plate/Tube
 

Mouse

EmageMGI:109346
EurexpressMGI:109346
MGI GXDMGI:109346

Frog

Xenbase488878

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-040615-2
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