GEISHA - A Chicken Embryo Gene Expression Database
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ITSN1
intersectin 1

Gene
Official SymbolITSN1
Official Full Nameintersectin 1
CGNC ID11953
also known asintersectin-1|intersectin 1 (SH3 domain protein)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_416715
PolypeptideXP_416715
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.9847
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly35378FBgn0023388
Human6453ENSG00000205726MIM:602442
Mouse16443ENSMUSG00000022957All phenotypic alleles (5):Targeted, knock-out(2) Gene trapped(3) MGI:1338069
Xenopus733480, 3943005904193
Zebrafish368504ENSDARG00000000086ZDB-GENE-030616-226ZFIN:ZDB-GENE-030616-226
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418506
Ensembl GeneENSGALG00000016006
KEGGgga:418506
GEISHA IdITSN1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGTGGTGGTTTGGAGAAGTTCAAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTGCCTTTTTCGTTCAGTAGGTGTCcDNA Template Length874
Forward cDNA Template Probeshow
AACATATCCAGNAAGANGCAAGTCTGCACACCATTGCTGGCTTGGGTCCATATCTGTTGTCAGCTTCACATAGTTGGAT
GGGAAGAGACCCACTTGTCCATTCACCTCCCCTTTCCACCAGTCTGGGTCTTCCTTGTTAAGGACGTTTATAATCTGGC
CTTTATTGAATGCTAGCTCATCATCATTCTGTGCAGTGTAGTCATACATGCCAATTACTTGGCACACTGAAGGTAATGC
TGTTGATTTAGGTAGCTCGGTTGGTGTAGTTTTACTGGTACCAGGGCTCAAAAGTTTCACATAATTAGCAGGAAACCAT
CCTATTTGTCGTTTTTTCCCTCGTGCTTGGAGCTCTCCTTCCCACCAGCCACCTGGGTTCTTCTTTCTGATAAGAATCA
ACTGACCAGGAGCAAGGGTGAGTTGTTCTGGACCCGTTGCTGTGTAAGAGGCAATAACTTGGGCAATTTCAGGTTTCTT
CCCTAAGCTTCCTGTTTTTCCAGCTGCTCCAGAAGCCTCANAATCTTTGAGTCTCACATAATTTGATGGGAAAACTCCT
GTTTTATCACCCAGTGTTCCTGTCCACCANTCGCCATCTTTCTTTGTCACAAGAATCATATCACCCTGCTGAAAGGTTA
GGTCTCCTTGTTCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
Epiblast
Mesoderm
Neural Plate/Tube
Primitive Streak
Low level expression? Will redo to confirm.
7-12
stage 7
stage 10
stage 11
stage 11
Anterior Intestinal Portal
Extraembryonic Mesoderm
Forebrain
Headfold
Heart Tube
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Primitive Streak
Somites
Widespread Expression
Dorsal View
Ventral View
13-18
stage 14
stage 17
Anterior/Second Heart Field
Eye
Heart
Intermediate Mesoderm
Lateral Plate Mesoderm
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somatic Mesoderm
Somites
Spinal Cord
Trunk Mesenchyme
Widespread Expression
 
19-24
stage 22
stage 22
stage 22
Anterior/Second Heart Field
Eye
Gut
Head Mesenchyme
Heart
Leg
Mesonephros
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Somatic Mesoderm
Spinal Cord
Trunk Mesenchyme
Wing
 
25
stage 25
Widespread Expression
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.9847

Mouse

EmageMGI:1338069
EurexpressMGI:1338069
MGI GXDMGI:1338069

Frog

Xenbase5904193

Fruit Fly

BDGPFBgn0023388

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030616-226
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