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PRDM1 PR/SET domain 1Gene | Official Symbol | PRDM1 | Official Full Name | PR/SET domain 1 | CGNC ID | 11462 | also known as | Blimp-1, PR domain zinc finger protein 1|B-lymphocyte-induced maturation protein 1|PR domain 1|PR domain containing 1, with ZNF domain | gene type | protein-coding |
| Genomic Map | | Sequence Information | | Gene Expression | | Orthology | | Entrez Gene | Ensembl Gene | Genetic Phenotypes | MOD | Fruit Fly | | | | | Human | | | | | Mouse | | | | | Xenopus | | | | | Zebrafish | | | | |
| Gene Ontology | Molecular Function | | Biological Process | | Cellular Component | |
| Links to other databases | |
Entry 1GEISHA Id | PRDM1.UApcr | Data Source | GEISHA ISH Analysis | Forward cDNA Template Primer | 5’-TGGTACAGCAGCCAGTTCAG-3’ | Reverse cDNA Template Primer | 5’-AATTAACCCTCACTAAAGGTTTCCCTTCTGAGCACGGTC-3’ | cDNA Template Length | 743 | Complete cDNA Template Probe | show TGGTACAGCAGCCAGTTCAGAACACATAATGCAACCTAAACCTACCTCAGTGGTGTTGGCTGCCACCGGCGGTGAAGAA GCCATGAATCTCATTAAAAGCAAGAGGAATGTGACTGGTTACAAAACCCTCCCATACCCACTGAAGAAGCAGAACGGGA AGATCAAGTACGAATGCAACGTTTGCTCCAAGACCTTTGGCCAGCTCTCCAATCTGAAGGTGCACCTCCGAGTACACAG CGGAGAGAGACCATTTAAATGCCAGACTTGCAATAAAGGCTTCACACAGCTGGCTCACCTCCAGAAGCACTATCTGGTA CACACAGGAGAGAAGCCCCACGAGTGTCAGGTTTGTCACAAGCGGTTCAGCAGCACCAGCAATCTCAAAACCCACCTGC GGCTCCACTCTGGAGAGAAGCCTTACCAGTGCAAGCTGTGCCCAGCCAAATTCACCCAGTTTGTGCACCTGAAGCTGCA CAAGCGTCTCCACACCCGGGAGCGTCCCCACAAATGCATCCACTGCCACAAGAGCTACATTCACCTCTGCAGCCTCCAG GTCCACCTGAAGGGCAACTGCCCTGTCGCCCCCGCCTCCGGCCTCTCGATGGAGGACCTGAACCGAATCAACGAGGAGA TCGAGAAGTTCGACATCAGTGACAATGCCGACAAGTTGGAAGAGGTGGAGGACAATATCGACTTAACGTCCATCGTGGA GAAGGATATACTGACCGTGCTCAGAAGGGAAA |
Entry 2GEISHA Id | Blimp-1.Ha.2003 | Data Source | Publication | Complete cDNA Template Probe | show ATGAAAATGGACATGGAGGATGCTGACATGACCCTGTGGACGGAGGCTGATTTCGAAGAGAAGTGCACGTACATCGTCA ATGACCACCCGTGGGACCCCAGTGCCGATGGAGGCACCCTCACTCAGGCGGAGGCTTCCTTGCCAAGGAACTTGACTTT CAAATACGCATCAAACTGCAAAGAGGTCACTGGAGTTATAAGCAAAGAGTACATCCCAAAAGGAACACGCTTTGGACCC CTGGTAGGAGAGATCTATACCAGCGATACGGTTCCCAAGAATGCGAACAGAAAATACTTTTGGCGGATCTATTCAAGTG GTGAGCTTCACCACTTCATTGACGGCTTTAATGAGGACAAGAGCAACTGGATGCGTTATGTAAACCCTGGCTACTCAGT TCAGGAGCAGAACTTGGCAGCCTGTCAGAATGGAATGAACATCTACTTCTACACTATCAAGCCCATCCCTGCCAACCAA GAGCTGCTTGTGTGGTATTGCCGAGACTTTGCAGAGAGGCTGCACTATCCCTCCTCCAGAGAGCTGACAATGATGAACC TCACACAAACCCACGTTAATCCAAAGCAGCACAGTGCTGATAAAGATGAGCTCTATCAGAAGAGCGTCCCAAAGAAGGA GCACAGTGTGAAAGAAATCCTA | Citation | Ha AS, Riddle RD. cBlimp-1 expression in chick limb bud development. Gene Expr Patterns. 2003 Jun;3(3):297-300. | Copyright | Reprinted from Gene Expr Patterns, Volume 3, Issue 3, Alice S. Ha and Robert D. Riddle, cBlimp-1 expression in chick limb bud development, Pages 297-300, Copyright 2003, with permission from Elsevier.
Copyright © 2003 Elsevier Science B.V. All rights reserved. | Comments | Authors state: Whole-mount and section in situ hybridizations using digoxigenin- and fluorescein-labeled antisense RNA probes were performed as previously described ( Adams et al., 2000). Because insufficient information provided to verify exact probe sequence, sequence was obtained from NCBI (Acc# AB278131). |
Entry 3Stage | Image (click image to view full size) | Location (click to highlight) | Comments (click to highlight) | 19-23 | | stage 23 | | stage 23 | | Wing Mesenchyme
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Entry 4GEISHA Id | Prdm1.Zwane.2015 | Data Source | GEISHA ISH Analysis | Complete cDNA Template Probe | show AGTGCGTGTCGGGGAGTGAGGGCGCGGGTGCGTGCTGTGCGTGCACGGGTGTGCAGCGCTGGGGTGCGCGGTGCCGGGC GGATGGCTGGCTTTCCCTTGGACTAACATCCCAAGATGCGTGAGCTGGAGGTGGGGAGCCCGCTCTGTGGGGACACATG AAGGCTGCTACACGGTGTAGCTCGGACGCTGTGAGTTTCAAGAATCTGGTGAAAGGGAGAGAGTGGACAATGAAAATGG ACATGGAGGATGCTGACATGACCCTGTGGACGGAGGCTGATTTCGAAGAGAAGTGCACGTACATCGTCAATGACCACCC GTGGGACCCCAGTGCCGATGGAGGCACCCTCACTCAGGCGGAGGCTTCCTTGCCAAGGAACTTGACTTTCAAATACGCA TCAAACTGCAAAGAGGTCACTGGAGTTATAAGCAAAGAGTACATCCCAAAAGGAACACGCTTTGGACCCCTGGTAGGAG AGATCTATACCAGCGATACGGTTCCCAAGAATGCGAACAGAAAATACTTTTGGCGGATCTATTCAAGTGGTGAGCTTCA CCACTTCATTGACGGATTTAATGAGGACAAGAGCAACTGGATGCGTTATGTAAACCCTGGCTACTCAGTTCAGGAGCAG AACTTGGCAGCCTGTCAGAATGGAATGAACATCTACTTCTACACTATCAAGCCCATCCCTGCCAACCAAGAGCTGCTTG TGTGGTATTGCCGAGACTTTGCAGAGAGGCTGCACTATCCCTCCTCCAGAGAGCTGACAATGATGAACCTCACACAAAC CCACGTTAATCCAAAGCAGCACAGTGCTGATAAAGATGAGCTCTATCAGAAGAGCGTCCCAAAGAAGGAGCACAGTGTG AAAGAAATCCTGAAAATGGAATCCAGTCCTCCAAAAGGAAAAGACTTCTTCCAAACCAACATTTCACCGGTTACTCCAG AAAAGGACTTGGATGATTTGCGTAAGAACTATAGCCCAGAGAGGTGTTTCTTCCCTCGAGTTGTCTACCCGATCCGACC TCACATTCCAGAAGACTATCTGAAAGCTTCCTTAGCATATGGGATGGACAGACCCAGCTACATTACTCACTCACCCATC CAGTCATCTACTACACCAAGTCCTTCTGGGAGGAGCAGTCCAGACCAAAGTTTAAAAAGTTCAAGTCCTCACAGCAGCC CAGGGGTCACAGTTTCACCTCTGGCACCGACTTCCCAAGAGCACAGAGAGTCATACTCATACCTGAACGGATCCTATGG CTCAGAAGGATTGGGTTCTTACCCTGGATACGCCCCCCCTAGCCACCTCCCATCTGCCTTTCTACCATCCTATAACCCC CACTACCCCAAATTTCTGTTACCTCCGTTTAATATGAGCTGTAATAACCTGAGCGCTTTGAACAATATCAATGGCATCA ACAATTTCAATCTCTTCCCACGGATGTATCCCCTTTATGGCAACCTGCTCAGTGGAGGTAGCCTTTCCCACCACATGTT GAACCCCACCACGCTCCCCAGCTCATTGCCCAGCGAAGGAGGCCGTCGATTGCTGCAGCCCGATCATCCAAGAGACTTC CTCATACCAGCACCTAACAGTGCCTTCTCTATCACGGGCGCTGCTGCCAGCATGAAGGACAAGCCATGCAGCCCCACCA GCGGGTCACCCACAGCTGGTACAGCAGCCAGTTCAGAACACATAATGCAACCTAAACCTACCTCAGTGGTGTTGGCTGC CACCGGCGGTGAAGAAGCCATGAATCTCATTAAAAGCAAGAGGAATGTGACTGGTTACAAAACCCTCCCATACCCACTG AAGAAGCAGAACGGGAAGATCAAGTACGAATGCAACGTTTGCTCCAAGACCTTTGGCCAGCTCTCCAATCTGAAGGTGC ACCTCCGAGTACACAGCGGAGAGAGACCATTTAAATGCCAGACTTGCAATAAAGGCTTCACACAGCTGGCTCACCTCCA GAAGCACTATCTGGTACACACAGGAGAGAAGCCCCACGAGTGTCAGGTTTGTCACAAGCGGTTCAGCAGCACCAGCAAT CTCAAAACCCACCTGCGGCTCCACTCTGGAGAGAAGCCTTACCAGTGCAAGCTGTGCCCAGCCAAATTCACCCAGTTTG TGCACCTGAAGCTGCACAAGCGTCTCCACACCCGGGAGCGTCCCCACAAATGCATCCACTGCCACAAGAGCTACATTCA CCTCTGCAGCCTCCAGGTCCACCTGAAGGGCAACTGCCCTGTCGCCCCCGCCTCCGGCCTCTCGATGGAGGACCTGAAC CGAATCAACGAGGAGATCGAGAAGTTCGACATCAGTGACAATGCCGACAAGTTGGAAGAGGTGGAGGACAATATCGACT TAACGTCCATCGTGGAGAAGGATATACTGACCGTGCTCAGAAGGGAAATGGAAGGAGCTAATCTCAAAGTATCTTTACA GAGGAACCTGGGAAACGGACTTATCTCCTCAGGATGCAACCTTTACGAGTCTTCAGATATGTCAATTATGAAGTTGCCT CACAGTCACCCGCTACCTCTGTTACCTGTAAAGGTCAAGCAAGAAACAGTTGAACCAATGGACCCTTAAGACTTTTTGG CAAAGTGATTTTTTTATTTATGACTTGGCAAGTCAGGGTGCCTGTAGCAGTTGCTTGTACATAGTTTCAATGCTGCAAA GCAATCTTGGCTTACAGTAGTTTCCCTACGCTCTCCAGCTGAAAGAAGGAACTCCAAAGTTACTGTTTTCTCAGGGCAT AAAAAGAGGCAAAGGACTGCGTGTTGCCTCGCCAGTTACTAAAAGACAATCATCTATCCATAATTATTTTTTCAATGAT AGTACTTCATAATTTATTATGCAATTTATCATTCTAAAAGCAATAATTAGAAAAATGTTTACAATGACTGGGAAATTCA TTGTAATTTTTACTTTAAGTGTTTTTATTTTTTGTTTTATGGCCATTCTTCATTGAGTTTTTTTTCTGCACATCTGTTT TAAGAACCTAAGATTGGGGTTTCAGTAACCATGTTTTATGTACCAATGTCTTTTAAACAAATGTGTTTTTTTCTATTGC CAAAGTTGGACATTGACATACAGAATCCTAGATCAGTCAGACTGAAAAAAATGCTGGGTACTTTTATGTGCAAATCACC CCATTGGGATCGAAAAGGAGAAGAAAAAAAAAGAAAAGGTAGCAGCAAGCAGAGAAGAAACTGCTGCCCCGGCCTCTCT GAGGGCAGGAGAGGTTCTTCTACCTGCAGCTCTACCCAGAACAGATGTGACACAGCAAACACCTGCATGGACGATACCG TAGGTTTTTAGAGAACAGCTATAGGCCCACACCTTGTCACATAACTTTATGACCAAAGGAACGCATCAGCTTAAAGTGG CTCTTCCAAAATAATATATCACTTACATGCTTTTGTTTCCAACAACGGTTTAAAAGCAAACACACCAATATTCTTAATA TTCTGCCTCAAGGGAGATTTTCGGCAGAATTCTTTCTTTTCTCCCTCTTTTTCTTGTTTTGTTTGTTTTTGGCCAGAGC CTTCCAAGGATACAAAAAACAGTCAGACTCCCTGAGAAATAAGGGGTTTGGTCTTACATGTGTTTTTCTCACCCGCTTT GCCTGGGTGTAGAAGTGGGGAACAAAGTCCTTTTCTGGCACATACATATTTTTTCTTTCCTTCCTGTACAACTCAGATT TTTCTCAGTATTTGTGTTTGTACATTTTGTGGTTAATTTAATTAAAGAAGAAAAGGGCATTGCAAAGTTGTTGAACAAC AATTACCTCAGTGCTTGTGTCCAGTGGTGCAGACAATGCTGTTTTATCTAAATGCTTTGCTACTTTAGAGAAGAAACCA AAATGTGCACAGGGAAAGATAGAATGCACGTCCTTTATCTTTTTGTTTTGCTAAGCCCAAAGATGATATGGTGACATTT GAGGTGTAGCAAAGAGTACATGTATATTTATAGATATATTTATACCACTATACTATATATGTATATGTATATATATTTA TACCACTTAAGTTGTGAGCCAAACCATGTAATAAAACCTATTTTTCATCTAAGCGTGAAAATCAACTGTTATCCAGTTT TGCATATTACCAATGACCTCAAAACCAAAAGGTTGTACAAAGGCATTTATCGCTTGCAAGTACACATGCAGGGCTGTCT TTGCAGGGCCCGAACTTGCAAACGCCTGATGTGAAAAACGTCACTCACATGGGGAGTCTGGGCAAAGTCAGGGGGAGGA ACCGTGTCTGCAGGACTGGGGTCCTCAGTGCCCTGCTCTCCTGGCAGTGTGTACTGGGGGGAAAAGAGGCGGGTGGGCA GTGAACGAGCAACCAGAAAACTTAACCAAAAGAACCCAAAAAGAAGCCAAATACTACGCATGCATGGTGTGAGTGCAGA GCACAGTGAAGGGTAGGCTGAAAGTCAGTGGGGGCGAGCTGTAGTGAGCCCCCCAGTCTCATTATATCCTGCCATTAAC AAGTTGCATCATCAACTCGCATCAATTTCAGTAGCATTAGCACAGTCTTCCCCTCCAGGTGCATCTTTTTGTCTGTTTC TATTACAAATTGTAAGGTCTCCCACTTCATCAATCCAGGATTTGGTGATATTTTTTTCCCTGCAGAACTTTATTTTAAT GCCTTTGGTTCAACAATCCCAACATACACACAGCTTTTGAAGGACTACAGTTCATTACATTTCCACTCCTGCAACTTGT GAGGCTGACATCTTTTAAATGTAGCAATAGTTCATAAATATAGTACGTACTTGTAGGATAAACCAAAGTATCATTACTC TGTCACTGGACACTCACTTTTCCTATATTTGCCTGTAGTGCTTTCTTGTATTTGATACAAATTTTACAAGAATTTATAT GCATCAGCTTTAAGAATTGTTACTTCTCTTTACTGTTTCCCCCTTCCCTTAGAAGTTTTACATGTGAATGTAGCAACAA TCAACAGTGTTTTGGGGTTTGTTTTTTTTTTTTTTTTTTTTTTTTGTCTCTCTTAAGAAAGACTCTGACCAAAGTTAAC AGGCTTTTTACTTTGCTAGAACAACAAACTATCATATGTTTACGTATTGGTTTACATCATTATTTATGTGCAAATTGTC AAATGTAAATTAAATATAAGTGTTCATTGCTTTA | Citation | Zwane TB, Nikitina NV. Spatiotemporal expression analysis of Prdm1 and Prdm1 binding partners in early chick embryo. Gene Expr Patterns. 2015 Jan;17(1):56-68. Epub 2015 Feb 17. DOI: 10.1016/j.gep.2014.12.003. | Copyright | Copyright © 2014 Elsevier B.V. | Comments | As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence above was obtained from NCBI (acc # XM_004940353.3). |
Entry 5GEISHA Id | BLIMP1.Trevers.2023 | Data Source | GEISHA ISH Analysis | Complete cDNA Template Probe | show CAACGTTTGCTCCAAGACCTTTGGCCAGCTCTCCAATCTGAAGGTGCACCTCCGAGTACACAGCGGAGAGAGACCATTT AAATGCCAGACTTGCAATAAAGGCTTCACACAGCTGGCTCACCTCCAGAAGCACTATCTGGTACACACAGGAGAGAAGC CCCACGAGTGTCAGGTTTGTCACAAGCGGTTCAGCAGCACCAGCAATCTCAAAACCCACCTGCGGCTCCACTCTGGAGA GAAGCCTTACCAGTGCAAGCTGTGCCCAGCCAAATTCACCCAGTTTGTGCACCTGAAGCTGCACAAGCGTCTCCACACC CGGGAGCGTCCCCACAAATGCATCCACTGCCACAAGAGCTACATTCACCTCTGCAGCCTCCAGGTCCACCTGAAGGGCA ACTGCCCTGTCGCCCCCGCCTCCGGCCTCTCGATGGAGGACCTGAACCGAATCAACGAGGAGATTGAGAAGTTCGACAT CAGTGACAATGCCGACAAGTTGGAAGAGGTGGAGGACAATATCGACTTAACGTCCATCGTGGAGAAGGATATACTGACC GTGCTCAGAAGGGAAATGGAAGGAGCTAATCTCAAAGTATCTTTACAGAGGAACCTGGGAAATGGACTTATCTCCTCAG GATGCAACCTTTACGAGTCTTCAGATATGTCAATTATGAAGTTGCCTCACAGTCACCCGCTACCTCTGTTACCTGTAAA GGTCAAGCAAGAAACAGTTGAACCAATGGACCCTTAAGACTTTTTGGCAAAGTGATTTTTTTATTTATGACTTGGCAAG TCAGGGTGCCTGTAGCAGTTGCTTGTACATAGTTTCAATGCTGCAAAGCAATCTTGGCTTACAGTAGTTTCCCTACGCT CTCCAGCTGAAAGAAGGAACTCCAAAGTTACTGTTTTCTCAGGGCATAAAAAGAGGCAAAGGACTGCGTGTTGCCTCGC CAGTTACTAA | Comments | The complete cDNA template sequence was obtained from the information from the publication as described in Trevers et al. 2023. |
| Data from NCBI Unigene EST Profile Unigene ID: Gga.46807 |
MouseFrogFruit FlyZebra FinchZebrafish
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