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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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MAF
MAF bZIP transcription factor

The human orthologue of this gene is associated
with the following human disease:

Cataract, pulverulent or cerulean, with or without microcornea

Gene

Official Symbol	MAF
Official Full Name	MAF bZIP transcription factor
CGNC ID	27421
also known as	transcription factor Maf\|c-Maf\|proto-oncogene c-maf\|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001044671
Polypeptide	NP_001038136
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.49589

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	4094	ENSG00000178573	MIM:610202	MIM:177075
Mouse	17132		All phenotypic alleles (5):Chemically induced(1) Radiation induced(1) Targeted, knock-out(1) Targeted, other(2)	MGI:96909
Xenopus	613051			6053270
Zebrafish	114467	ENSDARG00000015890	ZDB-GENE-010605-2	ZFIN:ZDB-GENE-010605-2

Gene Ontology

Molecular Function	sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity
Biological Process	transcription, DNA-templated
Cellular Component	nucleus

Links to other databases

Entrez Gene	693248
Ensembl Gene
KEGG	gga:693248

Entry 1

GEISHA Id	c-Maf.Reza.2004	Data Source	Publication
Complete cDNA Template Probe	show GGGTTTGTTGGTTGTTGTTTTTTTTTTTTTTCCCTCTCCCCCCCCTTTTTTTTTTATGATTGTTGTTATTTTGGTTGCG ATATATCGACTTTGATTTGATTTTTTTTTTTTTTTGTCTTCGGTCTCTTCTCCCTCCTCCTTCCCCCGATGAACCTCTC TCGTCGCTCTGCACTTTGCACGAGAAAGCCCAGAGGAAAGGCACCATGAAGTGTTAAAAATAACAAAACAAAAGCAAAA AAAAAGAGAGAGAGAGAGAGAGAGGAAAAGATTTCCTCGCAACAACACCCGCGAACGCTTCCAGCTGCAGTTTGCGAGA GAGAAAGAGAGAGAAGGGAGGAAAGAGCCGTGCGTGCAGAAGGCGCAGAGCCCCTCGCTCTGATGCAGCAGCGGCAGCG GAGGCTCTGCAGGGGATAACGCGGACGGGCGGAGCGCGGCGCGGCGCGGCGGAGGAGCGGACGGACGGGCGGACGGACG GACGGACGGACAGCAAAGCTGGCTCACCCGGCGGCAGCGCAGAGCAGCGCCCTCGCTCCCGGAGCGCACCCTTTCTGGA GGACTGTCAGCAGCAAAAGGATGGCATCAGAACTGGCAATGAGCGGCTCCGACCTGCCCACCAGTCCCCTGGCCATGGA ATATGTTAATGACTTCGATCTGATGAAGTTTGAAGTGAAAAAGGAGCCGGTGGAGACCGATCGCATTATCAGCCAGTGC GGCCGCTTGATCGCCGGGGGATCGCTCTCTTCCACCCCGATGAGCACGCCCTGCAGCTCGGTGCCCCCGTCCCCCAGCT TCTCGGCGCCCAGCCCCGGCTCCGGCACCGACCAGAAGACCCACCTGGAAGACTACTACTGGATGACGGGCTACCCGCA GCAGCTCAACCCCGAGGCGCTGGGCTTCAGCCCCGAGGACGCGGTGGAGGCGCTGATCAACAGCAGCCACCACCCGCTG CCCGGCGCCTTCGATGGCTATGCTAGAGGGCAGCAGCTGGCCGCGGCCGCCGGCGGCTCGGTGCCGGCCGAGGAGATGG GCTCGGCGGCCGCCGTGGTGTCGGCGGTGATCGCCGCGGCGGCGGCGCAGGGCGGCGCGCCCCACTACCACCACCACCA CCACCACCCGCACCACGGCGGCGGCGGCGGCGGCGGCGGACACCCCCACGGCGCGGCGCCGGGCAGCGCGCCGCCCTCC TCCGCCTCCTCCTCGGCCGCGGGCTCCGGAGGCGGCGGCGGCGGCGGCGGCGGAGGCGCCGGGGGGCTGCACCACCCGC ACCACGGAGGAGGCGGCGGCGGCGGCGGCCTGCACTTCGACGACCGCTTCTCCGACGAGCAGCTGGTCACCATGTCGGT GCGGGAGCTGAACCGGCAGCTGCGGGGCGTCAGCAAGGAAGAGGTGATCCGGCTGAAGCAGAAGAGGAGGACCCTCAAA AACAGGGGCTATGCCCAGTCCTGCCGCTTCAAGAGGGTCCAGCAGCGGCACGTCCTGGAGTCGGAGAAGAACCAGCTGC TGCAGCAAGTGGAGCACCTAAAGCAGGAGATCTCCAGGCTGGTCCGGGAGAGGGACGCCTACAAGGAAAAGTACGAGAA GCTGGTCAGCAATGGCTTCCGAGAAAACGGATCCAGCAGCGACAACCCCTCCTCTCCAGAGTTTTTCATGTACCCGAGA GAATCTTCTACAACGGTGATGTGAAAATCCCCGTTACCTGAGGTCAGAACAAAAGAAAATGTGATGCTGGACTGATGAT GGCTTAGGACAACGTTCTGGCACGAAGACAGCTACAAAGCACAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA GAACTCAGAAAGAAACAAGAAAAAAACAGCATTCTCTTGGTATCAACGAGAAGCTCTTTATTTTTCCTCAAGTTTTCTT TTCTAAAAAAAAAAAAAAAAAAAAAAAATTACTAAGACATTTGCAGAAATGAGACAAACTTTCTCTTCAGGTGACGGTA TTCAAGCAAGCATGTTGTTTTATTAAATTTAAAGAAAAATAGAGAAATTTGGGATACAGTATCAGGAGAACTGAGAAAC TGTGAATTTTCCATGAAAAAAAAAACACAACAAACTCCTTAAAACTGTGAACTGAGACATGGATGGAAATACCACTTAA CCCCCTGATTACACCCTGTGCGTTCTTTAGGAGACAACATCATCTTTGCTAACTCTATGATATTAGGGAATGGTTTACA AAATATCTTTTATTATAATCTTTTAAGACAAAAGAAATATTTAATTAAGCTGTGATTTTGACATTTCTTTTCAGAAGTC TTCTTGCACCCTCTGTTTTTAGATAGCATGGATGTATTTGAGCCAGCAGTCAAGGGCAGGAGAGATTTCTTTCCTTAAT AATCCTTTTATTCGCCACACCCTACAAAATCCTTGCAGGGAAAAGGAATCAACACCGCTACCATATCCCGATCGATACC TACAGCCTAACAGACAGTAATTATCAAAATAAAGAGGAAATCCCATATTGGGCTACATACCTAACCCATTAATCAAAAC AACAGAGAATATCTGTGGCACCGCGTTTCTGCAATAGCACAAAGCATGCCTCCTTGGGTTACACTTTGAACAGGCTATA ATCAAAAGAAGAGAGGCACGACTAACTAAGCCCCAGGAAGCCGCATTGTCCCTTTAACCCGCCGTATTCCCCATTTCCC ATTAGTACTTAACATTTTTCACTATGTTGTGACTGCTATTATTTCATTTAACACCGGTTAATCTCTATCGGAGGTATAC GGAAACCCTCTAGATGATAAGATTGGACGGGCTCCAGCACTGGCAGGTTCCGAGCGCGCGGGGCGTTCCGTCACGGGGA CCGCCTGCCAAGCTGCTCACGGATCAGCCTCTCGCTCAGCTCCCACAGGGCCACGGCCGTCAGCTCATTGCG
Citation	Reza HM, Yasuda K. Roles of Maf family proteins in lens development. Dev Dyn. 2004 Mar;229(3):440-8.
Copyright	Copyright © 2004 Wiley-Liss, Inc.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # D28598).

Stage

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7-12

stage 12

Lens

invaginating lens placode

Entry 2

GEISHA Id	c-MAF.Lecoin.2004	Data Source	Publication
Complete cDNA Template Probe	show GGGTTTGTTGGTTGTTGTTTTTTTTTTTTTTCCCTCTCCCCCCCCTTTTTTTTTTATGATTGTTGTTATTTTGGTTGCG ATATATCGACTTTGATTTGATTTTTTTTTTTTTTTGTCTTCGGTCTCTTCTCCCTCCTCCTTCCCCCGATGAACCTCTC TCGTCGCTCTGCACTTTGCACGAGAAAGCCCAGAGGAAAGGCACCATGAAGTGTTAAAAATAACAAAACAAAAGCAAAA AAAAAGAGAGAGAGAGAGAGAGAGGAAAAGATTTCCTCGCAACAACACCCGCGAACGCTTCCAGCTGCAGTTTGCGAGA GAGAAAGAGAGAGAAGGGAGGAAAGAGCCGTGCGTGCAGAAGGCGCAGAGCCCCTCGCTCTGATGCAGCAGCGGCAGCG GAGGCTCTGCAGGGGATAACGCGGACGGGCGGAGCGCGGCGCGGCGCGGCGGAGGAGCGGACGGACGGGCGGACGGACG GACGGACGGACAGCAAAGCTGGCTCACCCGGCGGCAGCGCAGAGCAGCGCCCTCGCTCCCGGAGCGCACCCTTTCTGGA GGACTGTCAGCAGCAAAAGGATGGCATCAGAACTGGCAATGAGCGGCTCCGACCTGCCCACCAGTCCCCTGGCCATGGA ATATGTTAATGACTTCGATCTGATGAAGTTTGAAGTGAAAAAGGAGCCGGTGGAGACCGATCGCATTATCAGCCAGTGC GGCCGCTTGATCGCCGGGGGATCGCTCTCTTCCACCCCGATGAGCACGCCCTGCAGCTCGGTGCCCCCGTCCCCCAGCT TCTCGGCGCCCAGCCCCGGCTCCGGCACCGACCAGAAGACCCACCTGGAAGACTACTACTGGATGACGGGCTACCCGCA GCAGCTCAACCCCGAGGCGCTGGGCTTCAGCCCCGAGGACGCGGTGGAGGCGCTGATCAACAGCAGCCACCACCCGCTG CCCGGCGCCTTCGATGGCTATGCTAGAGGGCAGCAGCTGGCCGCGGCCGCCGGCGGCTCGGTGCCGGCCGAGGAGATGG GCTCGGCGGCCGCCGTGGTGTCGGCGGTGATCGCCGCGGCGGCGGCGCAGGGCGGCGCGCCCCACTACCACCACCACCA CCACCACCCGCACCACGGCGGCGGCGGCGGCGGCGGCGGACACCCCCACGGCGCGGCGCCGGGCAGCGCGCCGCCCTCC TCCGCCTCCTCCTCGGCCGCGGGCTCCGGAGGCGGCGGCGGCGGCGGCGGCGGAGGCGCCGGGGGGCTGCACCACCCGC ACCACGGAGGAGGCGGCGGCGGCGGCGGCCTGCACTTCGACGACCGCTTCTCCGACGAGCAGCTGGTCACCATGTCGGT GCGGGAGCTGAACCGGCAGCTGCGGGGCGTCAGCAAGGAAGAGGTGATCCGGCTGAAGCAGAAGAGGAGGACCCTCAAA AACAGGGGCTATGCCCAGTCCTGCCGCTTCAAGAGGGTCCAGCAGCGGCACGTCCTGGAGTCGGAGAAGAACCAGCTGC TGCAGCAAGTGGAGCACCTAAAGCAGGAGATCTCCAGGCTGGTCCGGGAGAGGGACGCCTACAAGGAAAAGTACGAGAA GCTGGTCAGCAATGGCTTCCGAGAAAACGGATCCAGCAGCGACAACCCCTCCTCTCCAGAGTTTTTCATGTACCCGAGA GAATCTTCTACAACGGTGATGTGAAAATCCCCGTTACCTGAGGTCAGAACAAAAGAAAATGTGATGCTGGACTGATGAT GGCTTAGGACAACGTTCTGGCACGAAGACAGCTACAAAGCACAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA GAACTCAGAAAGAAACAAGAAAAAAACAGCATTCTCTTGGTATCAACGAGAAGCTCTTTATTTTTCCTCAAGTTTTCTT TTCTAAAAAAAAAAAAAAAAAAAAAAAATTACTAAGACATTTGCAGAAATGAGACAAACTTTCTCTTCAGGTGACGGTA TTCAAGCAAGCATGTTGTTTTATTAAATTTAAAGAAAAATAGAGAAATTTGGGATACAGTATCAGGAGAACTGAGAAAC TGTGAATTTTCCATGAAAAAAAAAACACAACAAACTCCTTAAAACTGTGAACTGAGACATGGATGGAAATACCACTTAA CCCCCTGATTACACCCTGTGCGTTCTTTAGGAGACAACATCATCTTTGCTAACTCTATGATATTAGGGAATGGTTTACA AAATATCTTTTATTATAATCTTTTAAGACAAAAGAAATATTTAATTAAGCTGTGATTTTGACATTTCTTTTCAGAAGTC TTCTTGCACCCTCTGTTTTTAGATAGCATGGATGTATTTGAGCCAGCAGTCAAGGGCAGGAGAGATTTCTTTCCTTAAT AATCCTTTTATTCGCCACACCCTACAAAATCCTTGCAGGGAAAAGGAATCAACACCGCTACCATATCCCGATCGATACC TACAGCCTAACAGACAGTAATTATCAAAATAAAGAGGAAATCCCATATTGGGCTACATACCTAACCCATTAATCAAAAC AACAGAGAATATCTGTGGCACCGCGTTTCTGCAATAGCACAAAGCATGCCTCCTTGGGTTACACTTTGAACAGGCTATA ATCAAAAGAAGAGAGGCACGACTAACTAAGCCCCAGGAAGCCGCATTGTCCCTTTAACCCGCCGTATTCCCCATTTCCC ATTAGTACTTAACATTTTTCACTATGTTGTGACTGCTATTATTTCATTTAACACCGGTTAATCTCTATCGGAGGTATAC GGAAACCCTCTAGATGATAAGATTGGACGGGCTCCAGCACTGGCAGGTTCCGAGCGCGCGGGGCGTTCCGTCACGGGGA CCGCCTGCCAAGCTGCTCACGGATCAGCCTCTCGCTCAGCTCCCACAGGGCCACGGCCGTCAGCTCATTGCG
Citation	Lecoin L, Sii-Felice K, Pouponnot C, Eychène A, Felder-Schmittbuhl MP. Comparison of maf gene expression patterns during chick embryo development. Gene Expr Patterns. 2004 Jan;4(1):35-46.
Copyright	Reprinted with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_001044671).

Stage

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Location (click to highlight)

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4-6

stage 5

Endoderm
Extraembryonic

Extraembryonic Endoderm
Figure 1 compares maf genes during gastrulation.

7-12

stage 11

stage 12

Ear/Otic Placcode
Extraembryonic
Eye
Lens
Nasal Placcode/Nerve
Notochord
Paraxial Mesoderm
Retina

Extraembryonic Endoderm
Figure 3 compares the differential expression of maf genes in the head at HH11-12.
Ventral Mesoderm

13-18

stage 14

stage 15

stage 17

Blood Vessels
Endoderm
Extraembryonic
Eye
Hindbrain
Lens
Retina
Trunk Mesenchyme

Endodermal Epithelium
Endothelial Cells
Figure 7 compares expression of maf genes in the trunk of E2 embryos.
Optic Cup
Optic Stalk

19-24

stage 19

stage 22

stage 24

Dermomyotome
Diencephalon
Hindbrain
Leg Mesenchyme
Lens
Neural Plate/Tube
Pancreas
Retina
Somites
Telencephalon

Anterior and Posterior Necrotic Zones
Basal Area of the Hindbrain
Dermamyotomal Lips
Figure 5 compares expression of maf genes in the trunk of E4 embryos.
Figure 6 compares maf genes during early steps of eye development from HH11 to HH24.
Neural Retina
Neural retina
Pancreatic Primordia
Rhombic Lips
Roof Plate
Telencephalic Vesicles

25-30

stage 26

stage 28

stage 30

Leg Mesenchyme
Midgut

Anterior and Posterior Necrotic Zones
Figure 4 compares maf genes in the head of HH15 to HH26 embryos.
Figure 9 compares expression of maf genes along the digestive tract in HH17 to HH26 chicken embryos.
Ileo-caecal Region
Tendon

31-34

stage 32

stage 34

Leg Mesenchyme

Figure 8 compares maf genes in the developing limb bud in HH22 to HH34 chicken embryos.
Tendon

Entry 3

GEISHA Id	cMAF.Reza.2007	Data Source	Publication
Complete cDNA Template Probe	show GGGTTTGTTGGTTGTTGTTTTTTTTTTTTTTCCCTCTCCCCCCCCTTTTTTTTTTATGATTGTTGTTATTTTGGTTGCG ATATATCGACTTTGATTTGATTTTTTTTTTTTTTTGTCTTCGGTCTCTTCTCCCTCCTCCTTCCCCCGATGAACCTCTC TCGTCGCTCTGCACTTTGCACGAGAAAGCCCAGAGGAAAGGCACCATGAAGTGTTAAAAATAACAAAACAAAAGCAAAA AAAAAGAGAGAGAGAGAGAGAGAGGAAAAGATTTCCTCGCAACAACACCCGCGAACGCTTCCAGCTGCAGTTTGCGAGA GAGAAAGAGAGAGAAGGGAGGAAAGAGCCGTGCGTGCAGAAGGCGCAGAGCCCCTCGCTCTGATGCAGCAGCGGCAGCG GAGGCTCTGCAGGGGATAACGCGGACGGGCGGAGCGCGGCGCGGCGCGGCGGAGGAGCGGACGGACGGGCGGACGGACG GACGGACGGACAGCAAAGCTGGCTCACCCGGCGGCAGCGCAGAGCAGCGCCCTCGCTCCCGGAGCGCACCCTTTCTGGA GGACTGTCAGCAGCAAAAGGATGGCATCAGAACTGGCAATGAGCGGCTCCGACCTGCCCACCAGTCCCCTGGCCATGGA ATATGTTAATGACTTCGATCTGATGAAGTTTGAAGTGAAAAAGGAGCCGGTGGAGACCGATCGCATTATCAGCCAGTGC GGCCGCTTGATCGCCGGGGGATCGCTCTCTTCCACCCCGATGAGCACGCCCTGCAGCTCGGTGCCCCCGTCCCCCAGCT TCTCGGCGCCCAGCCCCGGCTCCGGCACCGACCAGAAGACCCACCTGGAAGACTACTACTGGATGACGGGCTACCCGCA GCAGCTCAACCCCGAGGCGCTGGGCTTCAGCCCCGAGGACGCGGTGGAGGCGCTGATCAACAGCAGCCACCACCCGCTG CCCGGCGCCTTCGATGGCTATGCTAGAGGGCAGCAGCTGGCCGCGGCCGCCGGCGGCTCGGTGCCGGCCGAGGAGATGG GCTCGGCGGCCGCCGTGGTGTCGGCGGTGATCGCCGCGGCGGCGGCGCAGGGCGGCGCGCCCCACTACCACCACCACCA CCACCACCCGCACCACGGCGGCGGCGGCGGCGGCGGCGGACACCCCCACGGCGCGGCGCCGGGCAGCGCGCCGCCCTCC TCCGCCTCCTCCTCGGCCGCGGGCTCCGGAGGCGGCGGCGGCGGCGGCGGCGGAGGCGCCGGGGGGCTGCACCACCCGC ACCACGGAGGAGGCGGCGGCGGCGGCGGCCTGCACTTCGACGACCGCTTCTCCGACGAGCAGCTGGTCACCATGTCGGT GCGGGAGCTGAACCGGCAGCTGCGGGGCGTCAGCAAGGAAGAGGTGATCCGGCTGAAGCAGAAGAGGAGGACCCTCAAA AACAGGGGCTATGCCCAGTCCTGCCGCTTCAAGAGGGTCCAGCAGCGGCACGTCCTGGAGTCGGAGAAGAACCAGCTGC TGCAGCAAGTGGAGCACCTAAAGCAGGAGATCTCCAGGCTGGTCCGGGAGAGGGACGCCTACAAGGAAAAGTACGAGAA GCTGGTCAGCAATGGCTTCCGAGAAAACGGATCCAGCAGCGACAACCCCTCCTCTCCAGAGTTTTTCATGTACCCGAGA GAATCTTCTACAACGGTGATGTGAAAATCCCCGTTACCTGAGGTCAGAACAAAAGAAAATGTGATGCTGGACTGATGAT GGCTTAGGACAACGTTCTGGCACGAAGACAGCTACAAAGCACAAAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA GAACTCAGAAAGAAACAAGAAAAAAACAGCATTCTCTTGGTATCAACGAGAAGCTCTTTATTTTTCCTCAAGTTTTCTT TTCTAAAAAAAAAAAAAAAAAAAAAAAATTACTAAGACATTTGCAGAAATGAGACAAACTTTCTCTTCAGGTGACGGTA TTCAAGCAAGCATGTTGTTTTATTAAATTTAAAGAAAAATAGAGAAATTTGGGATACAGTATCAGGAGAACTGAGAAAC TGTGAATTTTCCATGAAAAAAAAAACACAACAAACTCCTTAAAACTGTGAACTGAGACATGGATGGAAATACCACTTAA CCCCCTGATTACACCCTGTGCGTTCTTTAGGAGACAACATCATCTTTGCTAACTCTATGATATTAGGGAATGGTTTACA AAATATCTTTTATTATAATCTTTTAAGACAAAAGAAATATTTAATTAAGCTGTGATTTTGACATTTCTTTTCAGAAGTC TTCTTGCACCCTCTGTTTTTAGATAGCATGGATGTATTTGAGCCAGCAGTCAAGGGCAGGAGAGATTTCTTTCCTTAAT AATCCTTTTATTCGCCACACCCTACAAAATCCTTGCAGGGAAAAGGAATCAACACCGCTACCATATCCCGATCGATACC TACAGCCTAACAGACAGTAATTATCAAAATAAAGAGGAAATCCCATATTGGGCTACATACCTAACCCATTAATCAAAAC AACAGAGAATATCTGTGGCACCGCGTTTCTGCAATAGCACAAAGCATGCCTCCTTGGGTTACACTTTGAACAGGCTATA ATCAAAAGAAGAGAGGCACGACTAACTAAGCCCCAGGAAGCCGCATTGTCCCTTTAACCCGCCGTATTCCCCATTTCCC ATTAGTACTTAACATTTTTCACTATGTTGTGACTGCTATTATTTCATTTAACACCGGTTAATCTCTATCGGAGGTATAC GGAAACCCTCTAGATGATAAGATTGGACGGGCTCCAGCACTGGCAGGTTCCGAGCGCGCGGGGCGTTCCGTCACGGGGA CCGCCTGCCAAGCTGCTCACGGATCAGCCTCTCGCTCAGCTCCCACAGGGCCACGGCCGTCAGCTCATTGCG
Citation	Reza HM, Urano A, Shimada N, Yasuda K. Sequential and combinatorial roles of maf family genes define proper lens development. Mol Vis. 2007 Jan 16;13:18-30.
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_001044671.1