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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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DZIP1
DAZ interacting zinc finger protein 1

Gene

Official Symbol	DZIP1
Official Full Name	DAZ interacting zinc finger protein 1
CGNC ID	12679
also known as	zinc finger protein DZIP1\|DAZ interacting protein 1, Zinc finger protein DZIP1
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_416984
Polypeptide	XP_416984
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	22873	ENSG00000134874		MIM:608671
Mouse	66573	ENSMUSG00000042156	All phenotypic alleles (1):Targeted, other(1)	MGI:1914311
Xenopus	733791, 446844			997054
Zebrafish	402875	ENSDARG00000000943	ZDB-GENE-040526-1	ZFIN:ZDB-GENE-040526-1

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418789
Ensembl Gene
KEGG	gga:418789

Entry 1

GEISHA Id	DZIP.Aglyamova.2007	Data Source	Publication
Complete cDNA Template Probe	show CCAAGTCGGCTTCAGGATTGTAGAGAGATCAACACTGTCTAACAGAACTGTTTCCAGTCCTTACATTACTTCTGAAGGT AAACAGAAGTTCAATCAATTGGGAATTTCCTCATCTACCATACCACAAAAACCAGTAAAACGGTCTTTGACAGCTGTCC GCCCAGCTGAACAAAGAGCAGCCATCGCTGAGAATACATCTACACCAAAGAAGCTCATCGGAAATGAAGCTTCCAAAAA GACATCTAGTATCACAACTCCACCATTCAGTTCAGAGGAAGAAGCAGATGACGATGATGTCAAACAGTTGCGCGTCTCA CGAGAGTTGTTGCAAAAACAGTCAAAAACATCGAGCAGCAAAATTAGTGCTTTTCAGATGGCTTCTGACAAAAGTGATG TGGATGGGACAGAGGAAAGTGAAACTGAAGAAACAGGAACACCTGTCAAAACCTCAAAAGGAACTGTTATTCAAAAGCT GACTGAACAAGTTGGAAGGAGTCTTTCTAACCATGCAAATAAGAGCAGGCCGGCTGGAGGGATAGATGTTGCACAAGCA TTTATTAAGAAAGAAGAGGTGCAAGAACCCAAGTTCACAGAAGCAGATGAAGATGACTGGGATATATCATCTATAGAAG AAGACTATTTGTTAATGAAAGATAATAATGGTCAGAAGGCATCAATAGTTCAGAAAAATGAGTCAAATGCTACGTCTGT TGTGCATGCGTGGGGTCTTCCAAAGAAGACTGTACCAAAACAAGAAGGTCCTCGTGAAGTTGATAATACAAGCACATTA AAAAGCAGCTTAGTCACTGTAACAGATTGGAGTGATTCTTCAGATATATAATAGTTATATTCGTGTTGGGAGGCGCTGC TTTTTGGTTTCTATTGAGTGTGAAAATGTAATTGAAATCATCGAGTGTTTCCTGCTCATTTCTCATGCTGTTCAAGTGA CAACAATGAATACTGTTTACAGAGCTCCTGTGTCTTTTAGCCCTGA
Citation	Aglyamova GV, Agarwala S. Gene expression analysis of the hedgehog signaling cascade in the chick midbrain and spinal cord. Dev Dyn. 2007 May;236(5):1363-73
Copyright	Copyright © 2007 Wiley-Liss, Inc.
Comments	Sequence below was obtained from NCBI (XM_416984) using the primer pairs given in the publication: DZIP1-forward, 5′-CCAAGTCGGCTTCAGGATTGTAG-3′and DZIP1-reverse, 5′-TCAGGGCTAAAAGACACAGGAGC-3'.

Stage

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Location (click to highlight)

Comments (click to highlight)

13-18

stage 14

Midbrain
Neural Plate/Tube

Rostral Floor Plate

25-26

stage 26

Isthmus/MHB
Neural Plate/Tube

Rostral Floor Plate

Entry 2

GEISHA Id	DZIP1.Agarwala.2005	Data Source	Publication
Complete cDNA Template Probe	show CGAGCGGGGCACGAGAGACGGAGCTCGGACATGCCCTTCACGGAGCGCGCCTATTTCCCGGCGGGGGCGGCCGCGACCG GCGCGGGGCCGTTTCCCGCCTTCCAGTTCCGCGGGCGCCATGAGGGCCCGGACTGGCGGCGGCTGAGCGCCGTGGACGT GGGCCGGGTGTGGCGGGAGGGCGACGTGGCGGCCCTGCAGGAACACCTGGAGCACGTCACCTTCTGCAGCGCCGAGCGG GAGCGCTGTCCCCACTGCCAGGGCCCCGCCGACCCGCTGCTGCTCAAGCTGCTGCGCCTGGCCCAGCTGTGCACCGAGT ACCTGCTGCACTCGCAGGAATACCTGAGCGCCCAGCTTGGCAGCCTGGAAGAGGCTCTGCGTGCGGCCCAGGCCCAGCG CGACCGCCTGGCCGAGGAGGTGGCCCAGCGCACCCAGGAGGTCAAGGGGCTGAAAGAGGAGTGCCGGCGCAGGAAGAAG ATGATCAGCACCCAGCAGATGATGCTGGAGGCCCGAGCCAGCTACCATCAGTGTCAGTTCTGTGAAAAGGCTTTTATGA ACTATTCCTTTTTACAAGGTCACATGCAAAGGCGTCATCCAGAAGAATCTCAGATTGCAGAACAAAAGAGGAAAGCGAA GACAGACAAACTGCAGGATGAGATTGAGAAACTGAAGGAGCAGCTGCAGCTAACCAAATCCCAGTTAGAAGCTGAACAG CAAGCTAATGTGGTCCGATTTTCCAAGGAATGTGAACAGCAAAAATCAAAAGAAGAAGAAATTCTACAATCATTTCATA AATGGAAAGAAGAAGAAAAAGCCAAATTGGCTGATGAAATAGAAAAAGTGAAAGATATGTTTATGAAAGAGCTTAAGGA GTTATCTTCAAGAAATTCAACATTAGAAAATCAACTGTTAGCATTACAAACATCCAGTATGCAGAAGTCCAATTTAGGG ACACTGAAAGACAGCCACGAATTCATGGAAGAGAAGCCTCAGAGTACTCAGGATTATCACAAAGTGGTTAAACTTCTTG AAAAACAGGAAAGTAAATGGACGTCTAGAATACAAGCCCTTCGTCAAGATCATGAAACAGAGAAGTCCCTGCTCCTGTC ACAGATTGAGAAGCTTAAATCGTCAGTGAGAGAAGACCTGAATAAAAATAACACCTTTTACAAGAGGAGGATAGAAGAA TTGGGAGAGAGGCTTCAGGAACAGAACGATCTGATTATTACTCAAAAGAAGCAGATAAAAGAGTTATCCACAAAATCAG TTGCAAGCATCAAACCCTATGATACAAACACTGCAGTTGAGCGTCTTGAAGAACCTAAATCAAGTCTACCTGTCATGTA TGAGCAGGCCCCCTTGGTACATATGCTGGAGCCCATAGAGGAGCTTTCAGAAGAGGAAAAAGGTAATGAAAACGATCTT AAAACAGGTAGAAGTAACCAACATTTAATAAATGCTTTGAAGACTGATCCTTCTTTAACTAAAGAATTAAGAGTTGTTT TGGAGCAAGCCCTGGAGGAAAAACTGGAATCCTTGGGAATTAAAGCAGGTGTCCGTGGTATCCCAAATGATCGCTTAAA TAAAATTCTACGTGCCATTGAATCTGCTAGAGAACACAAACTGAAGCAAGAGCCTCACATTCAACGAATTCGAGAGTAT CTTGAACGCCAAGTCGGCTTCAGGATTGTAGAGAGATCAACACTGTCTAACAGAACTGTTTCCAGTCCTTACATTACTT CTGAAGGTAAACAGAAGTTCAATCAATTGGGAATTTCCTCATCTACCATACCACAAAAACCAGTAAAACGGTCTTTGAC AGCTGTCCGCCCAGCTGAACAAAGAGCAGCCATCGCTGAGAATACATCTACACCAAAGAAGCTCATCGGAAATGAAGCT TCCAAAAAGACATCTAGTATCACAACTCCACCATTCAGTTCAGAGGAAGAAGCAGATGACGATGATGTCAAACAGTTGC GCGTCTCACGAGAGTTGTTGCAAAAACAGTCAAAAACATCGAGCAGCAAAATTAGTGCTTTTCAGATGGCTTCTGACAA AAGTGATGTGGATGGGACAGAGGAAAGTGAAACTGAAGAAACAGGAACACCTGTCAAAACCTCAAAAGGAACTGTTATT CAAAAGCTGACTGAACAAGTTGGAAGGAGTCTTTCTAACCATGCAAATAAGAGCAGGCCGGCTGGAGGGATAGATGTTG CACAAGCATTTATTAAGAAAGAAGAGGTGCAAGAACCCAAGTTCACAGAAGCAGATGAAGATGACTGGGATATATCATC TATAGAAGAAGACTATTTGTTAATGAAAGATAATAATGGTCAGAAGGCATCAATAGTTCAGAAAAATGAGTCAAATGCT ACGTCTGTTGTGCATGCGTGGGGTCTTCCAAAGAAGACTGTACCAAAACAAGAAGGTCCTCGTGAAGTTGATAATACAA GCACATTAAAAAGCAGCTTAGTCACTGTAACAGATTGGAGTGATTCTTCAGATATATAATAGTTATATTCGTGTTGGGA GGCGCTGCTTTTTGGTTTCTATTGAGTGTGAAAATGTAATTGAAATCATCGAGTGTTTCCTGCTCATTTCTCATGCTGT TCAAGTGACAACAATGAATACTGTTTACAGAGCTCCTGTGTCTTTTAGCCCTGAGTTTGTACAAAGAATTTTCATATGC ACATCGCTGGCCATCAGTATTTGGAAACCAAGAAAATTGTTCTTCCTTGTGAAGTCAGTGCTGAAAATCCTTGATTTCA CTGAGGTGAAGATTTTGCCTCTATTGTTTACTTTAAAGACCAAACCTGGTATTAGAAGAAAACCTGTTCACCAGTGAAC AGAATTTACTGCAGAGTATTACTTTATAAGATTTTTTAAATGCATATTTTCTTGTATTTTATCATAAACTTTATAGAAA ATGGTGAGCATTTTAAATAGACTGTTTCCATGTATTCAAATGTTAAGTTTCTAACATGGTTTACAATAAACGCCAAAGG GGAAAAAAAGGCCTCATAAATAAAAGTTACTACTAAATGTCTCCTATTTTGTGAAGTCACCCTTTTTCCCGCTATTAGA ATTAACTCTTAGTTAACATAAAAGCAGAAAAGAAAAGAAAATGAAAAAAACACTTCAATCTGTTTTAAGGAAAAATAAT GACCTTTAATTGAGCGCATACATCCATACTTGTTGTGTGCCCACTTACTTGAAAAGACACAGTGAGGGTTTGACTTAAG TTCAAAAGCAAAATAAAAGAAGCCATGAATGACTTTGTAATTCCAATGTA
Citation	Agarwala S, Aglyamova GV, Marma AK, Fallon JF, Ragsdale CW. Differential susceptibility of midbrain and spinal cord patterning to floor plate defects in the talpid2 mutant. Dev Biol. 2005 Dec 1;288(1):206-20. Epub 2005 Oct 21.
Copyright	Copyright © 2005 Elsevier Inc. All rights reserved.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_416984).