GEISHA - A Chicken Embryo Gene Expression Database
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DROSHA
drosha ribonuclease III

Gene
Official SymbolDROSHA
Official Full Namedrosha ribonuclease III
CGNC ID9781
also known asRNASEN, ribonuclease 3|drosha, ribonuclease type III|ribonuclease III, nuclear|ribonuclease type III, nuclear
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNANM_001006379
PolypeptideNP_001006379
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly35747FBgn0026722
Human29102ENSG00000113360MIM:608828
Mouse14000ENSMUSG00000022191All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3) MGI:1261425
Xenopus100135003, 733193494684
Zebrafish567505ENSDARG00000055563ZDB-GENE-070209-23ZFIN:ZDB-GENE-070209-23
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420911
Ensembl GeneENSGALG00000012916
KEGGgga:420911
GEISHA IdDROSHA.Carraco.2014Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
ACCAGTCTGGGTTCGCTGTACCCATTCTGAAAGCTATTATTCAAATGACCCCATGGATCAAGTGGGGGACTCTACTGTG
GTAGGCACAAGCAAGCTCCGAGATCTGTATGAGAAGTTTGAGGAGGAGCTAGGAAAACGACAGGCAAAGGCCAAAGCAG
CCAGGCCACCATGGGAGCCGCCGAAGACCAAGCTGGATGAAGATCTTGAGAGCTCCAGTGAGTCAGAATGCGACTCTGA
TGATGACAGCAGCTGCTCCAGCAGTTCAGATTCGGAAGTTTTTGATGTCATTGCAGAAATTAAGCGTAAGAAAGCACAC
CCTGATCGTCTTCATGAGGAACTGTGGTACAATGATCCAGGACAGATGAATGATGGACCGCTGTGCAAGTGCAGCGCTA
AAGCCCGACGAACAGGGATAAGACATGGCATTTATCCTGGTGAAGAGCCCATTAAACCATGTCGCCCCATGACCAACAA
TGCTGGAAGACTGTACCATTATCGAATTACAGTGTCACCTCCCACAAACTTCTTAACAGACAGACCTACTGTTATTGAG
TATGATGACCATGAATATATCTTCGAAGGATTCTCCATGTTTTCACATGCCCCACTGACAAACATTCCTCTATGTAAAG
TAATCAGATTTAACATTGACTATACAATTCATTTCATTGAAGAGATGATGCCTGAGAATTTTTGTGTGAAAGGTCTTGA
GCTGTTCTCTTCTTATCTATTCAAAGATATTCTGGAGCTGTATGACTGGCATCTTAAAGGTCCTTCAGTTGAAAATGAT
TCTGTTTCCTGCCCCAGATTTCACTTCATGCCGCGATTTGTGAGATTTCTTCCAGATGGAGGGAAGGAAGTACTGTCAA
TGCATCAGATTCTTCTCTACTTGTTACGATGCAATAAAGCTTTGGTGCCTGAAGAAGAGATTGCCAACATGCTTCAGTG
GGAAGAGCTGGAATGGCAGAAATATGCAGAGGAATGCAAAGGGATGATCGTTACCAGCCCTGGCATGAAACCCAGCTCA
GTTCGTATTGATCAACTGGACCGTGAACAATTCAATCCTGATGTAATTACTTTCCCCATTATTGTCCACTTTGGGATAC
GACCTGCTCAACTCAGCTACGCTGGAGATCCTCAATACCAAAAACTATGGAAGAGTTATGTGAAGCTGCGTCACCTGCT
AGCTAACAGTCCCAAAGTCAAACAAGCTGATAAACAGAAATTATCACAGAGAGAGGAAGCACTGCAGAAAATCCGGCAG
AAGAACACGATGAGACGTGAAGTGACTGTCGAGTTGAGTAGCCAGGGATTCTGGAAGACGGGGATACGCTCTGATGTCT
GCCAGCACGCAATGA
CitationCarraco G, Gonçalves AN, Serra C, Andrade RP. MicroRNA processing machinery in the developing chick embryo. Gene Expr Patterns. 2014 Nov;16(2):114-21. Epub 2014 Oct 1. DOI: 10.1016/j.gep.2014.09.002.
CopyrightCopyright © 2014 Elsevier B.V.
CommentsAuthors indicated the probe was amplified by PCR using the following primers: 5′-ACCAGTCTGGGTTCGCTGTACC-3′ and 5′-TCATTGCGTGCTGGCAGACA-3′. Above sequence was extracted from NCBI accession number NM_001006379.1.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 1
Epiblast
 
4-6
stage 4
stage 6
Epiblast
Headfold
Neural Plate/Tube
Primitive Streak
 
7-12
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 11
Forebrain
Head Mesenchyme
Head Process
Hindbrain
Lateral Plate Mesoderm
Mesencephalon
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
HH9-
13-18
stage 13
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
stage 18
Cranial Ganglia
Diencephalon
Ear/Otic Placode
Esophagus
Eye
Forebrain
Hindbrain
Lateral Plate Mesoderm
Limb Buds
Mesencephalon
Midbrain
Nephric Ducts
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Retina
Somites
Spinal Cord
Tail
Telencephalon
HH13-
19-23
stage 23
stage 23
stage 23
stage 23
stage 23
Eye
Limb Buds
Pharyngeal Arches and Clefts
Retina
Somites
Spinal Ganglia and Nerves
Tail
Telencephalon
 
all
 
  

Mouse

EmageMGI:1261425
MGI GXDMGI:1261425

Frog

Xenbase494684

Fruit Fly

BDGPFBgn0026722

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070209-23
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