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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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ELF1
E74-like factor 1 (ets domain transcription factor)

Gene

Official Symbol	ELF1
Official Full Name	E74-like factor 1 (ets domain transcription factor)
BirdBase ID	BB-GG3206
CGNC ID	50862
also known as	RCJMB04_2c4, ETS-related transcription factor Elf-1, E74-like factor 1 , ets domain transcription factor, elf1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001006269
Polypeptide	NP_001006269
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.48307

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	1997	ENSG00000120690		MIM:189973
Mouse	13709	ENSMUSG00000036461	All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2)	MGI:107180
Xenopus	780315, 495059			492874
Zebrafish	30396	ENSDARG00000020759	ZDB-GENE-980526-335	ZFIN:ZDB-GENE-980526-335

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	418828
Ensembl Gene	ENSGALG00000016947
KEGG	gga:418828

Entry 1

GEISHA Id	ChEST596b9	Data Source	GEISHA ISH Analysis
Forward cDNA Template Probe	show GCGGCTCGAGCGGGGACGCGGCGCCGCAGGCCCCGCTGCGAGGCGGCCCGGGAGCGGCGTGAGGGGCGAGATAAACGGC TGTCCGCGTGGGAGAAACAGCTCAGGAAAGAACTCTCCTTGGTTTCTTTGAGAAGAGAAGGACCCAGGAACGCTGATGA TCTGAGAACTACTGAAACTGCCACTTGGTTCATTCTGTGATCCTGCCTTTCTGCCCTGCTGCACCTTGGTGACACTGTC CGTTCTTTTCCATTTGAGAACGCTTTTCTTCTTATGTGGAGCTGAGAGCTGGGAATGCGTTATTATGGCAGCAGTTGTA CAGCAGAATGAGCTTGTGTTTGAATTCGCCAGCAACGTCATGGAGGATGAGCAGCAGGTATGGGATGGTGGAAGAAATG GCATTTGTACGAGTTGGTGCAAGGAATGTTAGGAAAACGTGAGGAAAAGGTGTTGTGTAAAACACAAGAAAGCAAACAC TGAGATCATTATTGTTGCAGCAGACCTCTGCAGTTTCAAAAGCTTCCTGTTGCTTCCTGTAACTTGCACAAGCAGAGCA GAAATTGGTTGAAATGTTGTAACTTCTGCAGAATTGCAGAGACCTCCTCTGAAGATGTTTTTCCTTTGTCACTGATTTG TGCCAGTAGAATCCATTCGTGCTGTAAAATTCCTGGCATTCTGGTATTTGACGGTCGCTTNCAGTTTTGTGGTATGCTA GGATAAAATCCAAGAGAAAGCAACTGTCACACTACAGGTGACTGGAAGGAGCAGTAAGTGTTTGCTCTCTGCTCTTTGA AGATTGGTTTGCAAACTGCATTACTGTGTGTATATCAGCTATTCG
Comments	No specific expression detected stages 4-18.

no images

Entry 2

GEISHA Id	ELF1.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	TGAACAACCAAAGAAGAAAAAGGGG
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGGCTGCTGGAATCTCTGCTCGG	cDNA Template Length	1289
Forward cDNA Template Probe	show TTTTCCCGAGCCGAGCTAGATCTCTAATTTGTCACCGTCGTCTTCTTTTAGCACTCCTTGTACCCCAATCTGTTTAGCT TCTGTTGCTTTAATAACTGAAGTGATCACTGTGCCAGATGGATGAGCAACCACCTGTGAACTGCTGGGTGAAAAAGTTA CCACTGGGGTGGTGGCAGTGAAGGATGGAGACGAAGCCACGTTAGCTGTTCCATTGCATATTGTCTGCACGCTGCTGGT GAGAACCTGCTGAACTTGTGCTGGGCTCAGCACAATCGAGGAAGGAGGTGAGACTGGCTTCTGAGACTGTAGCATGACA TTTTCTTTAAGAACTGTCATGGGCTGTGAAGTAGGAATGGCTTGTAAAATAAATTTTTGGGGCGTTGCTGCTGAGGCTG GATCTGTGCTGGCTATCACTGTAGTAAGAGGCACCGTCTGGAGTGTTACAGTATGAAGCTGCTGATTTCCAGGAGAAAC AACCACTGGGACTTGGGTTGGAGTCTGTAAAGTCCTTATATTCTGAACTGAGGGATTTAATGTTTCATCTGGAACGTTA CTGGTTACAGCCGCGTGTCCTTCTGTGAGGGTATGCAATGGCTGCATTACGTGAACTGTCCGAAAAAGCTGAGTGGGAT GTACTGGCTGCGTAGACTGCATTGTCCTCAAAACTTCTGAAGTCAAGCCAGGTGTCTGCTGCTGTACAACTTCTACGTG CTCCTTAAGCTTAGCAGGCTTTGAATTTCCTGTTTTTAGAACTGTGGTGGATCCTCCCTTTGTTCCTGTGTTTGCAGAC GCTCTAGATCTGCTCGACTGGTTTCTACTGGCCACAGGAGTTGAGAGCAAACTTGAATCTGATGATTCAGTGCTAAGAC TTGCATCTTCATCATCTATATAGACGAGATCTTTTGGCATTTCCTTTAACTGATACACTAGGCGCTGACCTTCTACTTT AGCCAGTATTCCTCTTTGGTAATAATATCTGAAAGCTCCACCCATTGTTTCATAATTCAGTCAGGTTTGTTTTTGTGCT TTCCCCCAACCGGACCCGGCTTGGAATCTACAATTTGAAAATGCCCTTTCCCTTTGATCCCCTGAAATACTTAGACACT AACTTTTTCCGGACCATGCTAAAAAAACCCCAAAAAAATTGGGTTCCCTCCCCCCTGGTTTTCCTTTCCAAAATTTTTG GCGTTTTCCGGAACATCGACAAAAGGTTGCCCTCTCCCTTTTCCCTGGGGGACAAAA

Stage

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Location (click to highlight)

Comments (click to highlight)

1-3

stage 3

4-6

stage 5

Low level expression observed.

7-12

stage 7

stage 8

stage 9

stage 11

stage 12

Anterior Intestinal Portal
Area Pellucida
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
Widespread Expression

Stage 7+ to 8-.

13-18

stage 13

Anterior Intestinal Portal
Blood Islands
Blood Vessels
Intermediate Mesoderm
Lateral Plate Mesoderm
Mesoderm
Neural Plate/Tube
Somites

19-24

stage 20

stage 22

Widespread Expression

25

stage 25

Widespread Expression

Data from NCBI Unigene EST Profile
Unigene ID: Gga.48307

Mouse

Emage	MGI:107180
Eurexpress	MGI:107180
MGI GXD	MGI:107180

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-980526-335

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