GEISHA - A Chicken Embryo Gene Expression Database
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KCNMA1
potassium calcium-activated channel subfamily M alpha 1

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolKCNMA1
Official Full Namepotassium calcium-activated channel subfamily M alpha 1
CGNC ID49029
also known asKCa1.1, cSlo, slo, slo1, calcium-activated potassium channel subunit alpha-1|BK channel|BKCA alpha|calcium-activated potassium channel, subfamily M subunit alpha-1|k(VCA)alpha|maxi K channel|maxiK|potassium large conductance calcium-activated channel, subfamily M, alpha member 1|slo homolog|slo-alpha|slowpoke homolog
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204224
PolypeptideNP_989555
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.3260
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly42940FBgn0003429
Human3778ENSG00000156113MIM:609446MIM:600150
Mouse16531ENSMUSG00000063142All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:99923
Xenopus100491898, 373712922335
Zebrafish568554, 798583ENSDARG00000079840ZDB-GENE-070202-9, ZDB-GENE-101209-2ZFIN:ZDB-GENE-070202-9, ZFIN:ZDB-GENE-101209-2
Gene Ontology
Molecular Functionlarge conductance calcium-activated potassium channel activity, metal ion binding, protein binding, more...voltage-gated potassium channel activity
Biological Processpotassium ion transmembrane transport
Cellular Componentvoltage-gated potassium channel complex
Links to other databases
Entrez Gene374065
Ensembl Gene
KEGGgga:374065
GEISHA IdKCNMA1.Anderson.2021Data SourceDirect Submission
Complete cDNA Template Probeshow
GTTCTAGGTTATGTGAAGAAGTTCCCTGGGTGATGGGTAGGAAGGCTGGAAATGCCTTCTTCATGCCACCTTCACTGTC
TACCCAGCAAGAAAGCATGCAGAAAGAAAAAAATACTTGGACATGGGAGTAATTAGCATTGTATCTGCCAACCCAGACA
AGGTGCTTTTATGGTTAGTGCTGTTTTTTACCTTCCCCTTCCCCAAGCATGATAATTTTGAAGATTTGCTTGCTGTGTG
AATTGACAATGAAGACAAGCACTTTTACTGACAAAACCTGTAACCAGTGGTCTGCAGAGAGCTGCTGAACAGTGTTAAG
CATAACAATTGGAATACAGAACATATGTGTGTGCATTCAAATGCAGCTGTAAGTCCTGTCAGTAAAATATGTTGCAAAT
TTTGGTTGCTCCCCTACAAATGAATATATTACAGTTGCTTTTGATCATAAAGACAAATTCATGTTTTTCTTTTTGCAAA
GAAAGTTTTTTGCCCTGAGAATATTTATTTCTACNAGGATGTGCCANTTAAAGTGCTCNACAGGAAATATGACAATTTA
AANNCATTGTAAAANTTACATAGCTTACTTCTTTTTCTAAAGTGCANCAAGGATGAATAGAATGGGCCAAGGTATGACN
ATTAATGGTTCTGCATGACCTAGCAACTGCTGTGGGTTTCCTTCTATAANTTTGTCCTT
CommentsImages and probe sequence provided by Claire Anderson. The probe was supplied by Bernd Sokolowski and Paul Fuchs. Related paper: Anderson C, Khan MAF, Wong F, Solovieva T, Oliveira NMM, Baldock RA, Tickle C, Burt DW, Stern CD. A strategy to discover new organizers identifies a putative heart organizer. Nat Commun. 2016 7:12656. doi: 10.1038/ncomms12656. 
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Epiblast
 
4-6
stage 4
stage 5
stage 6
Area Opaca
Epiblast
Notochord
Primitive Streak
Unlabeled
 
7-12
stage 7
stage 7
stage 9
stage 10
stage 11
Area Opaca
Forebrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
Rhombomeres
Somites
extraembryonic mesoderm
HH7+
13-18
stage 13
stage 14
Forebrain
Foregut
Hindbrain
Midbrain
Neural Plate/Tube
Notochord
Rhombomeres
Somites
 
19-24
stage 21
stage 24
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.3260

Mouse

Emage
EurexpressMGI:99923
MGI GXDMGI:99923

Frog

Xenbase922335

Fruit Fly

BDGPFBgn0003429

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070202-9, ZDB-GENE-101209-2
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