GEISHA - A Chicken Embryo Gene Expression Database
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RAPGEF1
Rap guanine nucleotide exchange factor 1

Gene
Official SymbolRAPGEF1
Official Full NameRap guanine nucleotide exchange factor 1
CGNC ID2714
also known asrap guanine nucleotide exchange factor 1|Rap guanine nucleotide exchange factor (GEF) 1, Guanine nucleotide-releasing factor 2, C3G protein, CRK SH3-binding GNRP, Rap guanine nucleotide exchange factor 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Sequence Information
Genomic
RNAXM_415456
PolypeptideXP_415456
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly31618FBgn0259228
Human2889ENSG00000107263MIM:600303
Mouse107746ENSMUSG00000039844All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(2) Gene trapped(1) MGI:104580
Xenopus733953, 4441995729482
Zebrafish558635, 394101ENSDARG00000043593ZDB-GENE-081105-26, ZDB-GENE-040426-1001ZFIN:ZDB-GENE-081105-26, ZFIN:ZDB-GENE-040426-1001
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene417173
Ensembl GeneENSGALG00000003712
KEGGgga:417173
GEISHA IdChEST578b22Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCAGCGTGAAGAGTTCAAACGCTGGAAGATGACCCTGTAGACACACACAAACGCAGTGCTGTTCCGTATACAATAGAAC
AGAAAGGCCAAAAATACCCTACCAAACCCATACGCTGCGCAGCGTAGAGACCCGGCCTTGCAACACACTGAACTCCCAT
TGAAGAACTCAAGACATCATGCAGGATCCGTGCCCAGATTCCGAGCGCTCCCATCTCTCCTCGTTCACTATGAAGCTGA
AGGGCAAGTTTCATTCACCAAAAATAAAGAGAACTCCTTCCAAGAAGGGAAAGCAAGCTGACCTGACAGTGAAAACACC
AGAGAAGTCAGCGAACAAAAACTTATCATGGCTAGAGGAGAAGGAGAAGGAGGTCGTCAGTGCTCTGCGCTACTTCAAG
ACGATTGTGGACAAAATGGCAATTGATAAGAAAGTATTAGAGATGCTGCCAGGCTCAGCAAGTAAAGTGCTAGAAGCCA
TCCTGCCCCTGGTGCAAAGTGACCCACGCATCCAACAAAGTTCTGCCATCTCGTCCTGCTACAGCCGTGTGTACCAGAG
CCTGGCCAATCTCATTCGCTGGTCTGATCAAGTGATGCTGGAAGGTGTG
Commentsno specific expression detected at stage 12.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 15
stage 18
Lens
Myotome
Paraxial Mesoderm
Pharyngeal Arches and Clefts
Widespread Expression
 
19-22
stage 22
stage 22
Limb Buds
Myotome
Pharyngeal Arches and Clefts
Somatopleure
Spinal Cord
hand transected
motor horns,

Mouse

EmageMGI:104580
MGI GXDMGI:104580

Frog

Xenbase5729482

Fruit Fly

BDGPFBgn0259228

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-081105-26, ZDB-GENE-040426-1001
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