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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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HBZ
hemoglobin subunit zeta

Gene

Official Symbol	HBZ
Official Full Name	hemoglobin subunit zeta
CGNC ID	50308
also known as	HBAP, hemoglobin subunit pi\|embryonic alpha-globin pi-prime\|hemoglobin alpha, subunit pi\|hemoglobin pi chain\|hemoglobin pi' chain\|hemoglobin, zeta\|pi-globin, Hemoglobin subunit pi, Hemoglobin pi chain, Pi-globin
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001004374
Polypeptide	NP_001004374
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4875

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	3050			MIM:142310
Mouse	15126		All phenotypic alleles (1):Targeted, knock-out(1)	MGI:96019
Xenopus	448669, 734765, 394454, 397869			5888072, 478140
Zebrafish	561790, 572729, 100334599, 30597, 497162, 497166, 30507	ENSDARG00000045142, ENSDARG00000088330, ENSDARG00000089124, ENSDARG00000089475, ENSDARG00000079078, ENSDARG00000069735, ENSDARG00000097011	ZDB-GENE-101028-1, ZDB-GENE-061207-39, ZDB-GENE-980526-80, ZDB-GENE-041001-43, ZDB-GENE-081104-38, ZDB-GENE-980526-79	ZFIN:ZDB-GENE-101028-1, ZFIN:ZDB-GENE-061207-39, ZFIN:ZDB-GENE-980526-80, ZFIN:ZDB-GENE-041001-43, ZFIN:ZDB-GENE-081104-38, ZFIN:ZDB-GENE-980526-79

Gene Ontology

Molecular Function	heme binding, iron ion binding, oxygen binding, oxygen transporter activity
Biological Process
Cellular Component	hemoglobin complex

Links to other databases

Entrez Gene	416650
Ensembl Gene	ENSGALG00000023740
KEGG	gga:416650

Entry 1

GEISHA Id	Soares2403F05	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show CANAGCAGATCGGACGAGGGGGAGCCTGAGCCAGCACTCTCCTGCACAATGGCACTGACCCAAGCTGAGAAGGCTGCCG TGACCACCATCTGGGCAAAGGTGGCTACCCAGATTGAGTCCATTGGGCTGGAATCACTGGAGAGGCTTTTTGCCAGCTA TCCTCAGACGAAAACCTACTTCCCTCACTTTGATGTCAGCCAAGGCTCAGTTCAGCTTCGTGGTCACGGCTCCAAGGTC CTGAATGCCATTGGGGAAGCTGTGAAGAACATCGATGACATTAGAGGTGCTTTGGCCAAACTCAGCGAGCTGCATGCTT ACATCCTCAGGGTGGACCCAGTGAACTTCAAGCTGCTTTCCCACTGTATCCTGTGCTCTGTGGCTGCCCGCTATCCCAG TGATTTCACCCCAGAAGTTCATGCTGCGTGGGACAAGTTCCTGTCCAGCATTTCCTCTGTTCTGACTGAGAAATACAGA TAAATGGCTTCCACACTGGGTTAGGGACGTGCATCCATGGCACACAACAGCTGCCAAGTTCTGGGGTATTCTTCCTATG CAGTCCCCCCAACTCCCCTGCGCAGGGGCTCAGCCACCTGCAGACCACAATAAATAATTCAACTGTG

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 10

stage 12

Blood
Blood Islands

13-18

stage 13

stage 14

stage 15

stage 17

stage 18

Blood
Blood Islands

Entry 2

GEISHA Id	HBZ.Anderson.2021	Data Source	Direct Submission
Complete cDNA Template Probe	show GTTNACTGAAGGGAGCCTGAGCCAGCACTCTCCTGCACAATGGCACTGACCCAAGCTGAGAAGGCTGCCGTGACCACCA TCTGGGCAAAGGTGGCTACCCAGATTGAGTCCATTGGGCTGGAATCACTGGAGAGGCTTTTTGCCAGCTATCCTCAGAC GAAAACCTACTTCCCTCACTTTGATGTCAGCCAAGGCTCAGTTCAGCTTCGTGGTCACGGCTCCAAGGTCCTGAATGCC ATTGGGGAAGCTGTGAAGAACATCGATGACATTAGAGGTGCTTTGGCCAAACTCAGCGAGCTGCATGCTTACATCCTCA GGGTGGACCCAGTGAACTTCAAGCTGCTTTCCCACTGTATCCTGTGCTCTGTGGCTGCCCGCTATCCCAGTGATTTCAC CCCAGAAGTTCATGCTGCGTGGGACAAGTTCCTGTCCAGCATTTCCTCTGTTCTGACTGAGAAATACAGATAAATGGCT TCCACACTGGGTTAGGGACATGCATCCATGGCACACAACAGCTGCCAAGTTCTGGGGTATTCTTCCTATGCAGTCCCCC CAACTCCCCTGCGCAGGGGCTCAGCCACCTGCAGACCACAATAAATAATTCAACTG
Comments	Images and probe sequence provided by Claire Anderson. The probe was synthesized from cDNA clone ChEST53k6. Related paper: Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

7-12

stage 12

Blood
Blood Islands

Entry 3

GEISHA Id	HBZ.Anderson.2019	Data Source	Publication
Complete cDNA Template Probe	show TTGTTCACTGAAGGGAGCCTGAGCCAGCACTCTCCTGCACAATGGCACTGACCCAAGCTGAGAAGGCTGCCGTGACCAC CATCTGGGCAAAGGTGGCTACCCAGATTGAGTCCATTGGGCTGGAATCACTGGAGAGGCTTTTTGCCAGCTATCCTCAG ACGAAAACCTACTTCCCTCACTTTGATGTCAGCCAAGGCTCAGTTCAGCTTCGTGGTCACGGCTCCAAGGTCCTGAATG CCATTGGGGAAGCTGTGAAGAACATCGATGACATTAGAGGTGCTTTGGCCAAACTCAGCGAGCTGCATGCTTACATCCT CAGGGTGGACCCAGTGAACTTCAAGCTGCTTTCCCACTGTATCCTGTGCTCTGTGGCTGCCCGCTATCCCAGTGATTTC ACCCCAGAAGTTCATGCTGCGTGGGACAAGTTCCTGTCCAGCATTTCCTCTGTTCTGACTGAGAAATACAGATAAATGG CTTCCACACTGGGTTAGGGACATGCATCCATGGCACACAACAGCTGCCAAGTTCTGGGGTATTCTTCCTATGCAGTCCC CCCAACTCCCCTGCGCAGGGGCTCAGCCACCTGCAGACCACAATAAATAATTCAACTGCTAAAAA
Citation	Anderson C, Hill B, Lu HC, Moverley A, Yang Y, Oliveira NMM, Baldock RA, Stern CD. A 3D molecular atlas of the chick embryonic heart. Dev Biol. 2019 Dec 1;456(1):40-46. doi: 10.1016/j.ydbio.2019.07.003. Epub 2019 Jul 5.
Copyright	Copyright © 2019 Elsevier Inc. All rights reserved.
Comments	The complete cDNA template sequence was obtained from the information from the publication as described in Anderson et al. 2019.