GEISHA - A Chicken Embryo Gene Expression Database
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PRDM16
PR/SET domain 16

Gene
Official SymbolPRDM16
Official Full NamePR/SET domain 16
CGNC ID719
also known asPR domain zinc finger protein 16|PR domain containing 16|PR domain-containing 16-like protein
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_417551
PolypeptideXP_417551
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human63976ENSG00000142611MIM:605557
Mouse70673ENSMUSG00000039410All phenotypic alleles (4):Chemically induced(1) Targeted, other(2) Gene trapped(1) MGI:1917923
Xenopus100485690991669
Zebrafish559174ENSDARG00000078324ZDB-GENE-080613-2ZFIN:ZDB-GENE-080613-2
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene419388
Ensembl Gene
KEGGgga:419388
GEISHA IdPRDM16.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template Primer5’-AACAGCCACTGGATCTGAGC-3’
Reverse cDNA Template Primer5’-AATTAACCCTCACTAAAGGTGGCTCACTGGAACGTTCTC-3’cDNA Template Length715
Complete cDNA Template Probeshow
AACAGCCACTGGATCTGAGCATCGGCAACCGCATCCGAGCCAGTCAGAATGGAGGGAGAGAGCCACGGAAGAACCACAT
CTACGGGGAAAGGAAACTAATGGCAAGTGAAGTCTTACCCAAGATTTCCCAGTCTCAGCTGCCTCAGCAACCATCCCTG
CATTATGCTAAGCCATCACCCTTTTTCATGGATCCCATCTACAGCAGGGTGGAGAAGCGGAAGGTGACAGACCCTGTGG
GTGCCCTAAAGGAGAAGTACCTGCGACCCTCCCCGCTGCTATTCCACCCCCAGATGTCAGCCATAGAAACGATGACGGA
GAAACTGGAGAGCTTTGCAGCCATGAAGGCGGACTCCGGCAGTTCCCTGCAGCCCCTTCCCCACCACCCCTTCAACTTC
CGATCGCCACCACCCACACTGTCCGACCCCATCCTGAGGAAGGGCAAGGAGCGCTACACCTGCAGGTACTGTGGGAAGA
TCTTCCCTCGCTCAGCCAACCTGACGAGGCATCTGCGGACGCACACCGGAGAGCAGCCCTACAGGTGTAAATACTGTGA
CAGGTCATTCAGCATTTCCTCCAACCTCCAGCGGCACGTTCGGAACATCCATAACAAGGAGAAGCCATTCAAATGCCAC
CTGTGCAACCGGTGCTTTGGGCAGCAGACCAACCTGGACCGACATCTTAAGAAGCACGAGCACGAGAACGTTCCAGTGA
GCCA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Unlabeled
 
7-12
stage 7
stage 10
Forebrain
Head Mesenchyme
Intermediate Mesoderm
Neural Plate/Tube
 
13-18
stage 13
stage 17
Aorta
Forebrain
Foregut
Head Mesenchyme
Heart
Hindbrain
Leg Mesenchyme
Midbrain
Myotome
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Wing Mesenchyme
 
19-24
stage 19
stage 19
stage 19
stage 21
stage 21
stage 21
stage 21
stage 22
stage 22
stage 22
stage 22
Allantois
Anterior/Second Heart Field
Aorta
Atria
Cranial Ganglia
Esophagus
Eye
Forebrain
Foregut
Head Mesenchyme
Leg Mesenchyme
Lung
Myotome
Nasal Placode/Nerve
Nephric Ducts
Neural Plate/Tube
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Spinal Ganglia and Nerves
Stomach
Telencephalon
Ventricles
Wing Mesenchyme
 
25-26
stage 26
Cranial Ganglia
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

EmageMGI:1917923
EurexpressMGI:1917923
MGI GXDMGI:1917923

Frog

Xenbase991669

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-080613-2
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