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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CCR2
C-C motif chemokine receptor 2

Gene

Official Symbol	CCR2
Official Full Name	C-C motif chemokine receptor 2
CGNC ID	51320
also known as	CCR5-L, C-C chemokine receptor type 2\|C-C chemokine receptor 5 like\|chemokine (C-C motif) receptor 2
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_001045835
Polypeptide	NP_001039300
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.47508

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	729230	ENSG00000121807	MIM:601267	MIM:601267
Mouse	12772	ENSMUSG00000049103	All phenotypic alleles (5):Targeted, knock-out(3) Targeted, other(2)	MGI:106185
Xenopus	494705			6460520
Zebrafish	100005081, 100004625, 100004988, 100330391

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	420696
Ensembl Gene	ENSGALG00000011733
KEGG	gga:420696

Entry 1

GEISHA Id	CCR2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	5'-TTACCTACGGCATCCTCACCAG-3'
Reverse cDNA Template Primer	5'-AATTAACCCTCACTAAAGGTCTCCAGTCTGCTTTGGCTGTC-3'	cDNA Template Length	402
Complete cDNA Template Probe	show `TTACCTACGGCATCCTCACCAGCATTGTCACGTGGGCTGTTGCTCTTTTTGCCTCTGTTCCGGGGATAGTATTTCACAA AACTCAACAGGAAAATACACAGTGTACATGCAGTTTTCATTATCCTTCAGATGCCCTCATAAACTGGCAGCACTCCTAC ATTCTAAAGATGAACATCCTTGGGCTTATCATTCCAATGATCATTATGATTTTCTGTTACTCTCAAATTTTAAGAACAT TATTTGGATGTAGGAATGAGAAAAAACAGAAGGCGGTTCGACTTATTTTTGTCATCATGATTTTTTACTTCATCTTCTG GACACCTTTCCATGTTGCTTCTTTCGTGCATACATTTCAAACTTCTTTTTTTTCCCCAGACTGTGACAGCCAAAGCAGA CTGGAGA`

Stage

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Comments (click to highlight)

4-6

stage 4

stage 6

Unlabeled

7-12

stage 8

stage 9

stage 11

Foregut
Head Mesenchyme
Intermediate Mesoderm
Neural Plate/Tube

13-18

stage 18

19-24

stage 19

stage 22

stage 23

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Isthmus/MHB
Leg Mesenchyme
Liver
Lung
Midbrain
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Wing Mesenchyme

25-26

stage 26

Forebrain
Foregut
Head Mesenchyme
Hindbrain
Liver
Lung
Mesonephros
Midbrain
Sclerotome
Somatic Mesoderm
Spinal Cord
Ventricles

Entry 2

GEISHA Id	cKR2.Kee.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGGAGAACTATACTGACTTGGGTGACATGCCAACAACAACGTTTGACTACGGTGATACAGCACCATGCATGGGAACTG AGGAAAAGCACTTTGCAGCAAATTTTCTGCCCCCACTTTACTCTTTGGTGGTGATATTTGGCTTCATAGGCAACATTCT TGTTGTCCTTATCCTGGTAAAATACAAGAAGTTGAAGAGTATGACTGACATCTACCTGCTCAATCTGGCCATTTCTGAT TTGCTGTTTGTATTTTCTCTTCCTTTTTGGGCTTATTATGCTGCCCATGACTGGATTTTTGGAGATGCGCTGTGCCGGA TTCTCTCAGGTGTCTACCTCCTTGGCTTCTACAGTGGCATCTTTTTCATAATCCTGTTGACCATAGACAGGTATCTGGC CATAGTTCACGCAGTGTTTGCTTTAAAAGCTAGGACAGTTACCTACGGCATCCTCACCAGCATTGTCACGTGGGCTGTT GCTCTTTTTGCCTCTGTTCCGGGGATAGTATTTCACAAAACTCAACAGGAAAATACACAGTGTACATGCAGTTTTCATT ATCCTTCAGATGCCCTCATAAACTGGCAGCACTCCTACATTCTAAAGATGAACATCCTTGGGCTTATCATTCCAATGAT CATTATGATTTTCTGTTACTCTCAAATTTTAAGAACATTATTTGGATGTAGGAATGAGAAAAAACAGAAGGCGGTTCGA CTTATTTTTGTCATCATGATTTTTTACTTCATCTTCTGGACACCTTTCCATGTTGCTTCTTTCGTGCATACATTTCAAA CTTCTTTTTTTTCCCCAGACTGTGACAGCCAAAGCAGACTGGAGAAAACAATTCAAGTGACAGAAACAATTTCAATGGT CCATTGCTGTATCAATCCTGTGATCTATGCATTCGTTGGAGAAAAATTTAGGAAATATCTTCACATGTTTTTCCGAAAG CATGTTGCAACTCACCTGTGCAAAAAGTGTCCATCTCTTTATCGTGAAAAATTAGAAAGAGTTAGTTCCACATTCACAG CATCTACTGCTGAGCACGACATCTCTACTGGACTGTAA
Citation	Yun Kee, Byung Joon Hwang, Paul W. Sternberg, Marianne Bronner-Fraser. Evolutionary conservation of cell migration genes: from nematode neurons to vertebrate neural crest. Genes Dev. 2007 February 15; 21(4): 391396.
Copyright	Copyright © 2007, Cold Spring Harbor Laboratory Press
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_001045835.1).