GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

BCAT1
branched chain amino acid transaminase 1

Gene
Official SymbolBCAT1
Official Full Namebranched chain amino acid transaminase 1
CGNC ID9949
also known asbranched-chain-amino-acid aminotransferase, cytosolic|branched chain amino-acid transaminase 1, cytosolic|branched chain aminotransferase 1, cytosolic
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_416424
PolypeptideXP_416424
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST Profile
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly32297FBgn0030482
Human586ENSG00000060982MIM:113520
Mouse12035ENSMUSG00000030268All phenotypic alleles (3):Targeted, other(2) Gene trapped(1) MGI:104861
Xenopus100124778, 4946835826084
Zebrafish337412ENSDARG00000045568ZDB-GENE-030131-9358ZFIN:ZDB-GENE-030131-9358
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene418193
Ensembl Gene
KEGGgga:418193
GEISHA IdBCAT1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCGCTAATAAAGGTCCCTGCTTCG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGAACAGAGGCTTGACATCTCCCCcDNA Template Length1068
Forward cDNA Template Probeshow
TGCTANGAATGCAATTCAGAAAAATTCGTAGCTGAGATAATTAAAGAAGCCCATCTCAATGCAATTGCAATTTAATGAT
TCTACATTAGAAGCACTGTACTGTAGTTGGCATCATTCTCTGCTGCTTAGAAAGCTTTCTGGGAAGCTTATTTCTNCTG
TAATAAAATAACTTTGGATTAGAGTTAAAAGCAATATGACTGGTATTACTACTACTTTGCACTTACAAAGAAGTAGGAA
CACCTGCCCAGGGTCACAAAGTCAGTGTCAGTCTGTTCAGCCATTACATGTCTAAGAAGCGCAACTCAGATCCCTGATC
ACACCTGCAAGATAAATACAACACTTTTTATTTTAGTAAATGGTTGACCTCAGTGTGTACTCAGCCAATGTTTGCACCT
GCCCACCTCTCAGTATACAAACCTGCCACTAAGACATTCAACTATTAGTAGGGTGATTCCCATGCAGAGAGAAAAGTCT
GACGTAGCCATTATCCAACAGACTGGGATACCATCTTTGTGATCTGCTTTGCAGCCAGGCACTATGAAGAGACAGTTCA
CAGTACGCTATCTGCTGAGATTCTGTACATTGTTTTGGAGAGGACACTGAATTCAAGAGTTTCTCCTTTAAACAGGCTG
CTATGGGATCACTCCCAGCTGTTTCTCTCTCTCCTTGGAAATCTATGTATTACACAGATATTTCAAAGAACTCACATTC
CAAATCACCCTTCCAAATATCTATTTTTTTCCAAATTACCACTGTTTATGCCTGTGGAAAAATAAGTATAAAGTAAGTA
TACAGGACAGATCAATTTATATCTTCCTATTGAATTAGGCACACCGTANACAAGAGTTTGTCTAAGGAAGAACAGTGGA
GGGCAACTTCTTTTTGGATTGANATAGTTGGACAGGTGTAAACTGGCTGGGTANAGAGATCTCTCCCCGTCTTGGCTTT
TGTCANATTTCCATTCTANATGCCAAAAAANTCNTGTTTGCTTTGCCCNCTATGGGCTGAACANATTATCTNTTC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
 
7-12
stage 10
Amnion
Anterior Intestinal Portal
Ectoderm
Endoderm
Eye
Forebrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
 
13-18
stage 18
stage 18
stage 18
Dermatome
Ear/Otic Placode
Endoderm
Eye
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Mesonephros
Myotome
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Tail
Wing Mesenchyme
 
19-24
stage 19
stage 21
stage 21
stage 21
Aorta
Cranial PNS
Dermatome
Ear/Otic Placode
Eye
Foregut
Head Mesenchyme
Isthmus/MHB
Leg Mesenchyme
Lung
Mesonephros
Myotome
Nasal Placode/Nerve
Neural Plate/Tube
Notochord
Oral Pharynx
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme
 
25
stage 25
stage 25
stage 25
Cranial PNS
Ear/Otic Placode
Eye
Foregut
Head Mesenchyme
Hindbrain
Leg Mesenchyme
Mesonephros
Metanephros
Midbrain
Nephric Ducts
Notochord
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Cord
Spinal Ganglia and Nerves
Wing Mesenchyme
 

Mouse

EmageMGI:104861
EurexpressMGI:104861
MGI GXDMGI:104861

Frog

Xenbase5826084

Fruit Fly

BDGPFBgn0030482

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-9358
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona