GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

CELSR1
cadherin EGF LAG seven-pass G-type receptor 1

Gene
Official SymbolCELSR1
Official Full Namecadherin EGF LAG seven-pass G-type receptor 1
CGNC ID10080
also known asCelsr, FMI1, c-fmi1, cadherin EGF LAG seven-pass G-type receptor 1|LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 1|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)|flamingo 1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_423746
PolypeptideXP_423746
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.22862
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus100038051853454
Zebrafish368436ENSDARG00000069185ZDB-GENE-030616-78ZFIN:ZDB-GENE-030616-78
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene426068
Ensembl GeneENSGALG00000013399
KEGGgga:426068

Entry 1

GEISHA IdCELSR1.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerCAAGGACGGCATCTTCGTTTTC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCACAGGTGTAGTTTCCAATGAGGCcDNA Template Length1025
Forward cDNA Template Probeshow
AAGCGGTAGGCCACTGGCTGGNGTCACAGNTCATCCACGGGTCACCACTGGCCACCTTTCTCCCCCGAAGGCCCATGGG
GAATTCCTAATCGCCCAATGGTTGGGCTTATTGTAGTACTGCACCTGGACTGAATGCCATTGCCCGTCACTGACTCCTC
CAGGAACAAATGGTGCCACCGTCGTGGTCGTCTCTCCTGCAGAGAATGTGAGCTGGATCTGCTCCTCAATGATCTCCAA
GGCAATGAAGTCATGCTTCTCATTGAACCGCCCGTTGTAGAGGAGGAGAGCGTTCCTCTCCCTGGTTGCGAACATGAGC
GAGACGGTGAAGTGGAAGCGCTGCCGCAGCCCCTTGAAGGTGATGAAGGACTGTGGGGGGAAGCTCCTGGTGGTCATCT
CGCAGTAGGGCCGCTCGTATTCTCCTGGTGGGCACTCGCACTTGAATCCCCCGATCAGCAGATTGATGCAGGTCCCTCC
ATTCTTACACACGCCTGGGGCACAGCGGCCGGAGCGGGCGTTCACCTCGCAGTACTCTCCAGTGTAGTCCTCGTAGCAC
TCGCAAGTGTAGCCCCCTTCTCGGCTGCGGCACAGCCCATTGCTGCCACACGGGTTGGAGTAGCACAGGTCGATCTCGG
TCTCGCAGTAATCGCCGGTGAAGCCAGGTGGGCAGCGGCACCGCAGGCCATTGATGGGGTGGATGGGGCGGAAGAGGAC
AGTGTTGGAGCTGATGAATGGGGCCGAGCTGTCAAACTTGAGGACGGAGACGCACTTCATGTAGTTCTCGCAGGGCTCG
CGCAAGCANATGTTGTCGTCNAAAGGCAGCACCCTCTGTGTGGAGATCGTGGTCAGCANCGTCCTATTNAGGTAGATCT
GCTCCTGCAGGTCCTCGGANGGGAANAACTTGTTGCGAATGCCACCAGGGAGCAAANCTGAAAANGTCACATTCAGGAT
ATTGGANCTGACATCTGTGTCGTTTTGGATGTTGAAAAC
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Primitive Streak
 
4-6
stage 4
Extraembryonic Mesoderm
Primitive Streak
 
7-12
stage 8
stage 9
stage 9
stage 10
stage 10
Amnion
Forebrain
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
 
13-18
stage 13
stage 17
stage 17
stage 18
Amnion
Forebrain
Heart
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
doesn't match expression stages 13 and 26
19-24
stage 19
Notochord
 
25-27
stage 27
stage 27
stage 27
stage 27
Eye
Forebrain
Foregut
Heart
Hindbrain
Liver
Mesonephros
Midbrain
Pancreas
Spinal Cord
Spinal Ganglia and Nerves
 

Entry 2

GEISHA Idc-fmi1.Formstone.2005Data SourcePublication
Complete cDNA Template Probeshow
TATGTATCGCACAACTATTGGGGAATCCACTGTCTCCCTTGAGAGCACCGTCAGGTCAGCCAAGAGCCACAATAGCTAC
CTTGCTTATATCCTCAGGGATGATGCTGCTCATAAGCTCAGTGGATCCTCAAGTCAAGCAAGGGCTGGCCAGACTGAAG
CAGATTCCTCCATTTTTCACAGGAATCCATCTAAATCCAATGAGCATGACTCAGACTCTGACAGCGAACTGTCCCTTGA
TGAGCACAGTAGCTCTTACGCCTCCTCCCATTCATCAGACAGTGAAGAAGACGGGCTTGAGCCAGAGAAAAAGTGGAAC
ACATCCACTGCCAAAAATAATGAGCGTGGCCCTCTCCACAGCACACCTAAAGAGTGCATAACGGCCAGCGACAGCGAGG
ACCCCAGCGGGAAACAGAAACTCAAAGTTGAGACCAAGGTCAACGTTGAGCTTCACAGGGAAAACCAGGTGAACCACAG
CAATGAAGCACCGCAGGACAAAGAGAATGATGGGCAGCAGAAGGAGAACAGACCTCTGTCCCACCAGAACAACCAGCAG
CCGGAGCAGAGGAAAGGCATCTTAAAAAATAAAGTCACCTACCCTCCCCCACTGATTGACAAGAATATGAAGAATCGGC
TGCGAGAAAAGCTGTCAGATTACAATCAGACCACGATCTCATCCAGGACTACTTCCCTTGGGACTAACGATGGGGTCCG
CTCTCCTTCAGACTCGGGGGTGACAGTAAAAAATGCTCGGAGGGAGCAGTCTCGAGACCAGCTCAATGGCATGGCCATG
AACGTCCATGTGGGAACAGGACATGCTGAGACATCAGACTCAGAGAAGCTGTGATCGCTGCTGCGCGGCTCTGGAC
CitationFormstone, C, Mason, I. Expression of the Celsr/flamingo Homologue, c-fmi1, in the Early Avian Embryo Indicates a Conserved Role in Neural Tube Closure and Additional Roles in Asymmetry and Somitogenesis. Dev Dyn. 2005 Feb;232(2):408-13.
CopyrightWiley-Liss, Inc. 2005
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 4
stage 5
stage 6
stage 6
stage 6
Forebrain
Hensen's Node
Midbrain
Neural Plate/Tube
Notochord
Primitive Streak
neural furrow
7-12
stage 7
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 10
Diencephalon
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Somites
Spinal Cord
right-hand lateral plate mesoderm
13-18
stage 14
stage 14
stage 18
stage 18
stage 18
stage 18
Intermediate Mesoderm
Myotome
Neural Plate/Tube
Notochord
Renal
Somites
Spinal Cord
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.22862

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase853454

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030616-78
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona