GEISHA - A Chicken Embryo Gene Expression Database
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SOX9
SRY (sex determining region Y)-box 9

The human orthologue of this gene is associated
with the following human diseases:
Gene
Official SymbolSOX9
Official Full NameSRY (sex determining region Y)-box 9
CGNC ID49063
also known asSOX-9, transcription factor SOX-9, Sox-9, Transcription factor SOX-9, SRY (sex determining region Y)-box 9
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Sequence Information
Genomic
RNANM_204281
PolypeptideNP_989612
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6662ENSG00000125398MIM:114290MIM:608160
Mouse20682ENSMUSG00000000567All phenotypic alleles (10):Targeted, knock-out(3) Targeted, other(7) MGI:98371
Xenopus549607, 494585, 3994051034768
Zebrafish60641, 60642ENSDARG00000003293, ENSDARG00000043923ZDB-GENE-001103-1, ZDB-GENE-001103-2ZFIN:ZDB-GENE-001103-1, ZFIN:ZDB-GENE-001103-2
Gene Ontology
Molecular FunctionDNA binding
Biological Processbranching involved in ureteric bud morphogenesis, cellular response to retinoic acid, more...heart valve development, male gonad development, regulation of transcription, DNA-templated, transcription, DNA-templated
Cellular Componentnucleus
Links to other databases
Entrez Gene374148
Ensembl Gene
KEGGgga:374148

Entry 1

GEISHA IdSox9.McKeown.2005Data SourcePublication
Complete cDNA Template Probeshow
CTCGCATGAATCTCCTAGACCCCTTTATGAAAATGACAGAAGAACAGGATAAAGGCCTCTCCGGCGCCCCCAGCCCCAC
CATGTCGGATGACTCCGCGGGGTCCCCCTGCCCCTCCGGATCCGGCTCGGACACGGAGAACACCCGTCCTCCTCAAGAG
AACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAAAGCGACGAGGACAAATTCCCCGTGTGCATCCGCGAGGCCG
TGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTGCGGGTGAACGGATCCAGCAAGAACAAACC
CCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTCGAAGGAAGCTGGCTGACCAGTACCCGCAT
CTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCTGAATGAGAGCGAGAAGCGTCCCTTCGTGG
AGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTACAAGTACCAACCACGCAGGAGGAAGACGGT
GAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCTCCCCCAACGCCATCTTCAAGGCGCTGCAG
GCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGGGGAGCACTCAGGGCAGTCGCAGGGCCCCC
CCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAGGACCTGAAGCGCGAGGGCCCTTTGGCGGA
AGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCGGCGAGCTCAGCAGCGACGTCATCTCCAACATC
GAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGGCCACCCGGGGGTCCCGGCCACCCACGGCCAGG
TCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCTCCGGCGGGCGCCGGGCACGCCTGGATGGCCAA
GCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGCACACACTGCCAAGCACTGAGCGTGAGCAGGGT
CCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAGCCATAACAGCGAGCAGCAGCAGCATCCCGAGC
AGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAACCTGCAGCACTACGGCTTCTCGTACCCCCCCATCAC
CCGCTCGGAGTACGATTACACCGAGCACCAGAACTCCGGCTCCTACTACAGCCACGCCGCCGGCCAGAGCGGAAGCCTT
TACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTACACCCCAATCGCAGACACGTCGGGGGTGCCAACTA
TCCCGCAGACCCACAGCCCGCAACAGCACTGGGAACAGCCGGTCTACACGCAGCTCACCCGGCCTTAAAGCCACGTGAA
GGCAAATAAATAAATAAACAAACCAATCAGAAAGGAAAGAAAA
CitationMcKeown S, Lee V, Bronner-Fraser M, Newgreen D, Farlie P. Sox10 Overexpression Induces Neural Crest-Like Cells From All Dorsoventral Levels of the Neural Tube but Inhibits Differentiation. Dev Dyn. 2005 Jun;233(2):430-44.
CopyrightCopyright © 2005 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # U12533).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
Neural Crest
Notochord
Somites
 
13-18
stage 18
Neural Crest
Notochord
Somites
 

Entry 2

GEISHA IdSox9.Tiecke.2006Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationTiecke E, Bangs F, Blaschke R, Farrell ER, Rappold G, Tickle C. Expression of the short stature homeobox gene Shox is restricted by proximal and distal signals in chick limb buds and affects the length of skeletal elements. Dev Biol. 2006 Oct 15;298(2):585-96. Epub 2006 Jul 12.
CopyrightReprinted from Developmental Biology, 298, Eva Tiecke, Fiona Bangs, Rudiger Blaschke, Elizabeth R. Farrell, Gudrun Rappold, and Cheryll Tickie, Expression of the short stature homebox gene Shox is restricted by proximal and distal signals in chick limb buds and affects the length of skeletal elements, 585-596, 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.
CommentsAuthors said: "Sox9, Type II Collagen and Aggrecan (a kind gift from Prof Hurle)." As information provided was insufficient to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-35
stage 35
Lateral Plate Mesoderm
Wing Mesenchyme
 

Entry 3

GEISHA IdSox9.Baranski.2000Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationBaranski M, Berdougo E, Sandler JS, Darnell DK, Burrus LW. The dynamic expression pattern of frzb-1 suggests multiple roles in chick development. Dev Biol. 2000 Jan 1;217(1):25-41.
CopyrightCopyright © 2000 Academic Press. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-34
stage 31
stage 34
stage 34
Leg Bones
Joint cartilage
Whole-mount labeling of stage HH26 embryos is shown for HNK-1, cfrzb-1, and Wnt-5a.

Entry 4

GEISHA IdSox9.Bendall.2003Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationBendall AJ, Hu G, Levi G, Abate-Shen C. Dlx5 regulates chondrocyte differentiation at multiple stages. Int J Dev Biol. 2003 Jun;47(5):335-44.
Copyright"Reprinted from Int. J. Dev. Biol., 47, Bendall AJ, Hu G, Levi G, Dlx5 regulates chondrocyte differentiation at multiple stages, 335-44, Copyright (2003), with permission from Copyright © 2003 UBC Press". All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc #NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Neural Plate/Tube
Trunk Mesenchyme
 
25-30
stage 26
Wing Bones
 
31-44
stage 44
Wing Bones
Comparison with other genes

Entry 5

GEISHA IdSox9.Bendall.2004Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204281.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 23
Sclerotome
 
25-26
stage 26
Wing Mesenchyme
 

Entry 6

GEISHA IdSox9.Montero.2007Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationMontero JA, Zuzarte-Luis V, Garcia-Martinez V, Hurle JM. Role of RhoC in digit morphogenesis during limb development. Dev Biol. 2007 Mar 1;303(1):325-35.
CopyrightReprinted with permission from Elsevier. Copyright © 2007 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-28
stage 28
stage 28
stage 28
stage 28
stage 28
Leg Bones
 

Entry 7

GEISHA IdSox9.Theodosiou.2005Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationTheodosiou NA, Tabin CJ (2005). Sox9 and Nkx2.5 determine the pyloric sphincter epithelium under the control of BMP signaling. Dev Biol. 2005 Mar 15;279(2):481-90.
CopyrightCopyright © 2004 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 23
Lung
Somites
 
25-30
stage 25
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Endoderm
Gizzard
Hindgut
Lung
Pancreas
Somites
Hindgut Endoderm
Liver Ducts
Mesoderm of the Horns of the Ceca
Pancreatic Ducts
Posterior Gizzard
Posterior Gizzard.
31-37
stage 32
stage 37
stage 37
stage 37
Duodenum
Endoderm
Gut
Hindgut
Pancreas
Cecum Endoderm
Ileum Endoderm

Entry 8

GEISHA IdSox9.Chimal-Monroy.2003Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationChimal-Monroy J, Rodriguez-Leon J, Montero JA, Gañan Y, Macias D, Merino R, Hurle JM. Analysis of the molecular cascade responsible for mesodermal limb chondrogenesis: Sox genes and BMP signaling. Dev Biol. 2003 May 15;257(2):292-301.
CopyrightReprinted with permission from Elsevier. Copyright © 2003 Elsevier B.V. All rights reserved.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204281.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 22
stage 24
Leg Mesenchyme
 
25-30
stage 26
Leg Mesenchyme
 
31
stage 31
Leg Bones
 

Entry 9

GEISHA IdSOX9.García-Andrés.2010Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationGarcía-Andrés C, Torres M. Comparative expression pattern analysis of the highly conserved chemokines SDF1 and CXCL14 during amniote embryonic development. Dev Dyn. 2010 Oct;239(10):2769-77.
Copyright© 2010 Wiley-Liss, Inc.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
stage 31
stage 31
Leg Bones
digits
metacarpals
zeugopod level

Entry 10

GEISHA IdSOX9.Domowicz.2011Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationDomowicz MS, Henry JG, Wadlington N, Navarro A, Kraig RP, Schwartz NB. Astrocyte precursor response to embryonic brain injury. Brain Res. 2011 May 10;1389:35-49. Epub 2011 Mar 9.
CopyrightCopyright © 2011, Elsevier
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc # NM_204281.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-41
stage 37
stage 37
stage 41
stage 41
Mesencephalon
 

Entry 11

GEISHA IdSOX9.Thompson.2010bData SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationH. Thompson, J.S. Griffiths, G. Jeffery, I.M. McGonnell. The retinal pigment epithelium of the eye regulates the development of scleral cartilage. Dev Biol. 2010 November 1; 347(1-13): 40-52.
Copyright2010
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204281.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Eye
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
 
19-24
stage 24
stage 24
Eye
Pharyngeal Arches and Clefts
 

Entry 12

GEISHA IdSOX9.Watanabe.2009Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationWatanabe T, Sato Y, Saito D, Tadokoro R, Takahashi Y. EphrinB2 coordinates the formation of a morphological boundary and cell epithelialization during somite segmentation. Proc Natl Acad Sci U S A. 2009 May 5; 106(18): 7467–7472.
CopyrightCopyright 2009 national Academy of Sciences USA
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI (acc #NM_204281.1 ).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
stage 12
Neural Plate/Tube
Somites
 

Entry 13

GEISHA IdSOX9.Szele.2002Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationSzele FG, Chin HK, Rowlson MA, Cepko CL. Sox-9 and cDachsund-2 expression in the developing chick telencephalon. Mech Dev. 2002 Mar;112(1-2):179-82.
CopyrightCopyright © 2002 Elsevier Science Ireland Ltd. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. The sequence below was obtained from NCBI (acc # NM_204281.1)
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 24
stage 24
Telencephalon
 
25-30
stage 25
Telencephalon
 
31-37
stage 31
stage 31
stage 37
Telencephalon
 

Entry 14

GEISHA IdSOX9.Hu.2012Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationHu N, Strobl-Mazzulla P, Sauka-Spengler T, Bronner ME. DNA methyltransferase3A as a molecular switch mediating the neural tube-to-neural crest fate transition. Genes Dev. 2012 November 1; 26(21): 2380–2385.
CopyrightCopyright © 2012 by Cold Spring Harbor Laboratory Press
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI NM_204281.1
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-8
stage 8
stage 8
Neural Crest
Neural Plate/Tube
 

Entry 15

GEISHA IdSOX9.Ferronha.2013Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationFerronha T, Rabadán MA, Gil-Guiñon E, Le Dréau G, de Torres C, Martí E. LMO4 is an essential cofactor in the Snail2-mediated epithelial-to-mesenchymal transition of neuroblastoma and neural crest cells. J Neurosci. 2013 Feb 13;33(7):2773-83.
CopyrightCopyright @ 2013 by the Society of Neuroscience
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (Acc. # NM_204269.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-10
stage 10
stage 10
Neural Crest
control embryo - Stage 10 embryo, 24 hour post-electroporation

Entry 16

GEISHA IdSOX9.Malashichev.2005Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationMalashichev Y, Borkhvardt V, Christ B, Scaal M. Differential regulation of avian pelvic girdle development by the limb field ectoderm. Anat Embryol (Berl). 2005 Oct;210(3):187-97. Epub 2005 Oct 18.
Copyright© Springer, Part of Springer Science+Business Media
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence was obtained from NCBI (acc #NM_204281.1).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-29
stage 26
stage 26
stage 27
stage 28
stage 29
Limb Buds
Paraxial Mesoderm
 

Entry 17

GEISHA IdSox9.Abzhanov.2004Data SourcePublication
Complete cDNA Template Probeshow
CTCCGTCTCTGCCGGCTTTACTTCTTGTTTTTAACCCTTCCCCGCCCCTCAGCCGCCCGGTTGTTTTTTTTCTCTCCGT
TTTCTCCTCCCCTGATCCCCCTGTGCCGCTTTCTCGCATGAATCTCCTAGACCCCTTCATGAAAATGACAGAAGAACAG
GACAAATGCATCTCCGACGCCCCCAGCCCCACCATGTCGGATGACTCCGCCGGGTCCCCCTGCCCCTCCGGATCCGGCT
CGGACACGGAGAACACCCGACCTCAAGAGAACACCTTCCCCAAAGGCGACCCGGACCTGAAGAAGGAGAGCGACGAGGA
CAAATTCCCCGTGTGCATCCGCGAGGCCGTGAGCCAGGTGCTCAAGGGCTACGACTGGACCCTGGTGCCCATGCCCGTG
CGGGTGAACGGATCCAGCAAGAACAAACCCCACGTGAAGCGCCCCATGAACGCCTTCATGGTGTGGGCCCAGGCGGCTC
GAAGGAAGCTGGCTGACCAGTACCCGCATCTGCACAACGCCGAGCTCAGCAAGACGCTGGGCAAGCTGTGGAGGCTGCT
GAATGAGAGCGAGAAGCGTCCCTTCGTGGAGGAGGCCGAGCGGCTGCGGGTGCAGCACAAGAAGGACCACCCCGACTAC
AAGTACCAACCACGCAGGAGGAAGTCGGTGAAGAACGGGCAGTCGGAGCAGGAGGAGGGCTCCGAGCAGACCCACATCT
CCCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGG
GGAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAG
GACCTGAAGCGCGAGGGCCGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCG
GCGAGCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGG
CCACCCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAGCTCGGCCAGCTCT
CCGGCGGGCGCCGGGCACGCCTGGATGGCCAAGCAGCAGCCGCAGCCCCCACAGCCCCCAGCACAGCCCCCGGCACAGC
ACACACTGCCAGCACTGAGCGGTGAGCAGGGTCCGGCACAGCAGCGGCCGCACATCAAAACAGAGCAGCTGAGCCCCAG
CCACTACAGCGAGCAGCAGCAGCACTCCCCGCAGCAGCAGCAGCAGCAGCAACAGCAGCTGGGCTACGGCTCCTTCAAC
CTGCAGCACTACGGCTCCTCGTACCCCCCCATCACCCGCTCGCAGTACGATTACACCGAGCACCAGAACTCCGGCTCCT
ACTACAGCCACGCCGCCGGGCAGAGCGGAGGCCTCTACTCCACCTTCACCTACATGAACCCCACGCAGCGCCCCATGTA
CACCCCCATCGCAGACACGTCGGGGGTGCCCTCTATCCCGCAGACCCACAGCCCGCAGCACTGGGAACAGCCCGTCTAC
ACGCAGCTCACCCGGCCTTAAAGCCACGTGAAGGCAAATAAATAAATAAACAAACCAATC
CitationAbzhanov A, Tabin CJ. Shh and Fgf8 act synergistically to drive cartilage outgrowth during cranial development. Dev Biol 2004 Sep 1;273(1):134-48.
CopyrightCopyright © 2004 Elsevier Inc.
CommentsAs insufficient information is provided in publication to verify exact sequence used to synthesize probe, the complete sequence was obtained from NCBI (acc # NM_204281).
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31-36
stage 36
stage 36
Face Mesenchyme
mesenchyme in the cartilages and distal epithelium of beak

Entry 18

GEISHA IdSox‐9.Barlow.1999Data SourcePublication
Complete cDNA Template Probeshow
CCCCAACGCCATCTTCAAGGCGCTGCAGGCGGACTCCCCGCAGTCATCCTCCAGCATCAGCGAGGTGCACTCCCCCGGG
GAGCACTCAGGGCAGTCGCAGGGCCCCCCCACGCCCCCCACCACCCCCAAAACGGACGCTCAGCAGCCGGGCAAGCAGG
ACCTGAAGCGCGAGGGCCCTTTGGCGGAAGGCGGCCGCCAACCTCCCCACATCGATTTCCGAGACGTGGACATCGGCGA
GCTCAGCAGCGACGTCATCTCCAACATCGAAACCTTCGACGTCAACGAGTTCGACCAATACCTGCCCCCCAACGGCCAC
CCGGGGGTCCCGGCCACCCACGGCCAGGTCACCACCTACAGCGGTACCTACGGCATCAGCAG
CitationBarlow AJ, Bogardi JP, Ladher R, Francis-West PH. Expression of chick Barx-1 and its differential regulation by FGF-8 and BMP signaling in the maxillary primordia. Dev Dyn. 1999 Apr;214(4):291-302.
CopyrightCopyright © 1999 Wiley‐Liss, Inc.
CommentsThe complete cDNA template sequence was obtained from the information from the publication as described in Barlow et al. 1999.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
25-30
stage 26
stage 28
stage 28
Leg
 
31-44
stage 44
  

Mouse

EmageMGI:98371
MGI GXDMGI:98371

Frog

Xenbase1034768

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-001103-1, ZDB-GENE-001103-2
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