Geisha

home

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

DKK1
dickkopf WNT signaling pathway inhibitor 1

Gene

Official Symbol	DKK1
Official Full Name	dickkopf WNT signaling pathway inhibitor 1
CGNC ID	2791
also known as	DKK4, dickkopf-related protein 1\|dickkopf WNT signaling pathway inhibitor 4\|dickkopf homolog 1
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	XM_421563
Polypeptide	XP_421563
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.897

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	22943	ENSG00000107984		MIM:605189
Mouse	13380	ENSMUSG00000024868	All phenotypic alleles (4):Targeted, knock-out(1) Targeted, other(3)	MGI:1329040
Xenopus	549037, 373592			481643
Zebrafish	799377, 30197	ENSDARG00000014103, ENSDARG00000045219	ZDB-GENE-090313-406, ZDB-GENE-990708-5	ZFIN:ZDB-GENE-090313-406, ZFIN:ZDB-GENE-990708-5

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	374156
Ensembl Gene	ENSGALG00000003814
KEGG	gga:374156

Entry 1

GEISHA Id	Dkk1.Chapman.2004	Data Source	Publication
Complete cDNA Template Probe	show CGACGAACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCG CGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCG GCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAG CGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGGGCGGACCGAGGA TGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGC AGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGAATATGGAGGTGGCAC TTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTACGCGCTGGGTTTCCA GTTGCGCTCGATGGACGCG
Citation	Chapman, S, Brown, R, Lees, L, Schoenwolf, G, Lumsden, A. Expression Analysis of Chick Wnt and Frizzled Genes and Selected Inhibitors in Early Chick Patterning. Dev Dyn. 2004 Mar;229(3):668-76.
Copyright	Wiley-Liss, Inc. 2004
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (acc # AY049017).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-5

stage 4

stage 5

Forebrain
Hensen's Node
Mesoderm, early
Neural Plate/Tube
Primitive Streak

rostral neural plate

Entry 2

GEISHA Id	Dickkopf1.Chapman.2002	Data Source	Publication
Complete cDNA Template Probe	show CGACGAACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCG CGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCG GCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAG CGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGGGCGGACCGAGGA TGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGC AGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGAATATGGAGGTGGCAC TTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTACGCGCTGGGTTTCCA GTTGCGCTCGATGGACGCG
Citation	Chapman SC, Schubert FR, Schoenwolf GC, Lumsden A. Analysis of spatial and temporal gene expression patterns in blastula and gastrula stage chick embryos. Dev Biol. 2002 May 1;245(1):187-99.
Copyright	2002 Elsevier Science (USA). All rights reserved.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

1-3

stage 2

stage 3

Area Opaca
Epiblast
Primitive Streak

4-5

stage 4

stage 5

Early Endoderm
Head Process
Hensen's Node
Hypoblast
Notochord
Primitive Streak

Entry 3

GEISHA Id	Dkk-1.Manisastry.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
Citation	Manisastry SM, Han M, Linask KK. Early temporal-specific responses and differential sensitivity to lithium and Wnt-3A exposure during heart development. Dev Dyn. 2006 Aug;235(8):2160-74.
Copyright	Copyright © 2006 Wiley-Liss, Inc.
Comments	Authors said: "The chick probe for Dkk-1 was provided by Dr. Susan C. Chapman (University of Utah, Salt Lake City, UT)." Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421563).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 4

Lateral Plate Mesoderm

Precardiac Region
neg. control shows some signal

7-11

stage 11

Unlabeled

Entry 4

GEISHA Id	Dkk1.Abe.2006	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
Citation	Abe Y, Chen W, Huang W, Nishino M, Li YP. CNBP regulates forebrain formation at organogenesis stage in chick embryos. Dev Biol. 2006 Jul 1;295(1):116-27. Epub 2006 Apr 19.
Copyright	Reprinted from Developmental Biology, 295, Yoko Abea, Wei Chena, Wei Huangc, Mizuho Nishinod and Yi-Ping Li, CNBP regulates forebrain formation at organogenesis stage in chick embryos, 116-127, Copyright 2006, with permission from Elsevier. Copyright © 2006 Elsevier B.V. All rights reserved.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

stage 19

Forebrain
Midbrain
Somites

Anatomy.

Entry 5

GEISHA Id	Dkk1.Chapman.2008	Data Source	Direct Submission
Complete cDNA Template Probe	show CGACGAACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCG CGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCG GCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAG CGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGGGCGGACCGAGGA TGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGC AGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGAATATGGAGGTGGCAC TTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTACGCGCTGGGTTTCCA GTTGCGCTCGATGGACGCG
Comments	Images Provided by Susan Chapman

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

1-3

stage 1

stage 2

stage 3

Area Opaca
Area Pellucida
Epiblast
Hensen's Node
Primitive Streak
Unlabeled

stage XIV

4-6

stage 4

stage 5

stage 6

Area Pellucida
Epiblast
Germinal Crescent
Head Process
Headfold
Hensen's Node
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak

7-12

stage 7

stage 8

stage 9

stage 10

stage 11

Anterior Intestinal Portal
Forebrain
Head Mesenchyme
Head Process
Headfold
Hensen's Node
Hindbrain
Hypoblast
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Paraxial Mesoderm
Pharynx
Primitive Streak
Somites
Spinal Cord
Tail

13-17

stage 17

Head Mesenchyme
Pharyngeal Arches and Clefts
Pineal Gland
Tail

Entry 6

GEISHA Id	DKK1.Foley.2000	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
Citation	Foley AC, Skromne I, Stern CD. Reconciling different models of forebrain induction and patterning: a dual role for the hypoblast. Development. 2000 Sep;127(17):3839-54.
Copyright	Printed in Great Britain © The Company of Biologists Limited 2000
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_421563).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

X-XIV

stage XII

Hypoblast

Stage XII-XIII EG&K

1-3

stage 2

Hypoblast

stage 4

Hypoblast

Entry 7

GEISHA Id	DKK1.Geetha-Loganathan.2009	Data Source	Publication
Complete cDNA Template Probe	show ATGGCGCAACCGAGCCGTCGGGGGGCCCCGAGGGCGAGGGGCGGGGGGAGCCGCGCCCCTTTGATCTCCGCGCATCAAA GGCAGAGCCTCGCCCGGCCCCGCTCCCCCCGCCGCGGCGCGGCCCCCCCGGCCGAGGTCAGTCGAGTGCACGGGGGGGC TCCGACGGGGCGGGCTCTCTTCCAGCCCCCCCAAACTCCGCGGGGCCGGGGGTGCGGAGCGGCCCCTTCCTGCGGGTCT GCGCTGGCGCCAGGAAGGGAGCGCGGCGGAGCTACCGCCGCCGTTGCGAAATCCCCTCCCTCGGGGGGGGGGAACAGCG GCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCCGGGTATAA AGAGGCGGCGGCGGGCAGAGATTTGATTAAAAATAAGTCTGCCGCTGCCGCCCCCGCGCCCTTCGACGGTAGCAACAAG GCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGG CGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTG CCCGGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGC CCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGC GCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGG GCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATG GCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGC GGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCTCGTGGGAGCTCCCCGCTGT GCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCAGTACGTTACTGTGTTGTGA ATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAGGCAGGACTGGGACGTGGTA CGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCG
Citation	Geetha-Loganathan, P, Nimmagadda, S, Antoni, L, Fu, K, Whiting, C, Francis-West, P and Richman, J. Expression of WNT signalling pathway genes during chicken craniofacial development. DEVELOPMENTAL DYNAMICS Volume 238, Issue 5, May 2009, Pages: 11501165.
Copyright	Dev. Dyn Copyright © 2009 John Wiley & Sons, Inc. All Rights Reserved.
Comments	Authors indicated the probe could be found in another publication (see text). As this information was insufficient to determine the precise probe, we've included NCBI acc# XM_421563 for this gene.

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 18

Eye
Nasal Placode/Nerve
Pharyngeal Arches and Clefts

19-24

stage 21

stage 24

Face Mesenchyme
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Surface Ectoderm

25-28

stage 28

Face Mesenchyme
Pharyngeal Arches and Clefts
Surface Ectoderm

Entry 8

GEISHA Id	DKK1.Sienknecht.2009	Data Source	Publication
Complete cDNA Template Probe	show CCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCCGACGAATTCTGCGGAGGGGCGG CCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCCTGCGCGACGCCATGTGCTGCCC GGGCACGGCCTGCAGCAACGGGCTNTGCACGCCCCCCGAACCCCCGCCCGGAGCTCCCGAGCTGGACGAGCCCGGCCCC GAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAGGAGGGCGACTTCTGCCTGCGCT CGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCAAACCCGTGCTGCGCGAGGGGCA GGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTGCCCCTGCGCCGAGGGCATGGCG TGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAGCGGCACTGAGCGACGCCGCGGG GCGGACCGAGGATGGACGGACGGACGGACGGACG
Citation	Sienknecht UJ, Fekete DM. Mapping of Wnt, frizzled, and Wnt inhibitor gene expression domains in the avian otic primordium. J Comp Neurol. 2009 Dec 20;517(6):751-64.
Copyright	Copyright © (2002 Wiley-Liss); This material is used by permission of Wiley-Liss, Inc., a subsidiary of John Wiley & Sons, Inc.
Comments	Authors gave NCBI acc# in the paper

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

13-18

stage 16

Ear/Otic Placode

19-23

stage 20

stage 23

Ear/Otic Placode

Entry 9

GEISHA Id	DKK1.Anderson.2020	Data Source	GEISHA ISH Analysis
Complete cDNA Template Probe	show GAACAGCGGCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCC GGGTATAAAGAGGCGGCGGCGGGCAGGTAGCGCTGCTCGGGGGCACGGAGCGCAGCGCCGAAGTACGGACGGGACGGGG CGGACGGGTCGGGACAGACGGGCGATGCGGGCTCTGCTGGCGCTGCTGGCGGCCCTGAGCTGCGCGGGGCGGGCGGGGG CCGGCGGCGGCCTCAGCTCCAACGCCATCAAGGTGGGGGCGGCCGCCAGCGCCGCCCCCGCCGCCGCCGCCCCCGCGCC CTTCGACGGTAGCAACAAGGCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCC GACGAATTCTGCGGAGGGGCGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCC TGCGCGACGCCATGTGCTGCCCGGGCACGGCCTGCAGCAACGGGCTCTGCACGCCCCCCGAACCCCCGCCCGGAGCTCC CGAGCTGGACGAGCCCGGCCCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAG GAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCA AACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTG CCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAG CGGCACTGAGCGACGCCGCGGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCT CGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCA GTACGTTACTGTGTTGTGAATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAG GCAGGACTGGGACGTGGTACGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCGGCCGCCCCTTCAGGTGAAGGGCAGCC CACGCTGCGCGGTGCCACGCTCCGGGGCGATGCCCCACGGAGGCGGCGGGGTCGCAGAGCGGGACCTCAGCGGCCCCGG CCCTGAGCCGTGCGGTCGCGCCGCTCTGGGCACAATAAAGTCTATT
Comments	Images provided by Claire Anderson. As insufficient information was provided to verify sequence used to synthesize probe, the sequence was obtained from NCBI (accession number XM_015278709.2).

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

4-6

stage 5

Early Endoderm
Early Mesoderm
Headfold
Hensen's Node
Hypoblast
Notochord
Primitive Streak

stage 5+

7-9

stage 8

stage 9

Anterior Intestinal Portal
Endoderm
Forebrain
Hensen's Node
Neural Plate/Tube
Notochord
Pharynx
Primitive Streak
Somites
extraembryonic endoderm

stage 8+
stage 8+, section 1
stage 8+, section 2
stage 8+, section 3
stage 8-
stage 8-, section 1
stage 8-, section 2
stage 8-, section 3

Entry 10

GEISHA Id	DKK1.Lee.2020	Data Source	Publication
Complete cDNA Template Probe	show GAACAGCGGCACAGCCCCCCGGGGCCCTTTGAAATCCCATCCCTCCTCCCCGAAGGGCGGGCGCAGGAGGCAGCCCCCC GGGTATAAAGAGGCGGCGGCGGGCAGGTAGCGCTGCTCGGGGGCACGGAGCGCAGCGCCGAAGTACGGACGGGACGGGG CGGACGGGTCGGGACAGACGGGCGATGCGGGCTCTGCTGGCGCTGCTGGCGGCCCTGAGCTGCGCGGGGCGGGCGGGGG CCGGCGGCGGCCTCAGCTCCAACGCCATCAAGGTGGGGGCGGCCGCCAGCGCCGCCCCCGCCGCCGCCGCCCCCGCGCC CTTCGACGGTAGCAACAAGGCGCCGCCGGCCGCCACCCGGCAGCCCTTCCCCTGCTCCGAGGACGAGGACTGCGGCCCC GACGAATTCTGCGGAGGGGCGGCCCGCGGCGGCGGCCCCCCGCTCTGCCTCGCGTGCAGGAGACGCCGCAAGCGCTGCC TGCGCGACGCCATGTGCTGCCCGGGCACGGCCTGCAGCAACGGGCTCTGCACGCCCCCCGAACCCCCGCCCGGAGCTCC CGAGCTGGACGAGCCCGGCCCCGAGGCGCTGCCCCGACGGACGCCCGCGCCCGCCTGGCCGCCCGACGCCAAAGGTGAG GAGGGCGACTTCTGCCTGCGCTCGTCGGACTGCGCGGCGGGGCTGTGCTGCGCCCGCCACTTCTGGTCCAAGATCTGCA AACCCGTGCTGCGCGAGGGGCAGGTGTGCACCCGGCACCGCCGGAAAGGAGCCCACGGCCTCGAGATCTTCCAGCGCTG CCCCTGCGCCGAGGGCATGGCGTGCCGCCCGCAGCGCGACCGCGGCGGTCCCGACGCCTCCCGCCTGCACACTTGCCAG CGGCACTGAGCGACGCCGCGGGGCGGACCGAGGATGGACGGACGGACGGACGGACGGGGGGATGGACTCTAGCCCCGCT CGTGGGAGCTCCCCGCTGTGCGCACAGCCGGAGCAGAAGGTTGTTTCTCGAGGGAACTACTCTTAAGCGACTGATTGCA GTACGTTACTGTGTTGTGAATATGGAGGTGGCACTTAGTGTACAGACGTTCTGAGTGAGCCGCCCGGGCGCTCCTCCAG GCAGGACTGGGACGTGGTACGCGCTGAGTTTCCAGCTGCGCTCGATGGACGCGGCCGCCCCTTCAGGTGAAGGGCAGCC CACGCTGCGCGGTGCCACGCTCCGGGGCGATGCCCCACGGAGGCGGCGGGGTCGCAGAGCGGGACCTCAGCGGCCCCGG CCCTGAGCCGTGCGGTCGCGCCGCTCTGGGCACAATAAAGTCTATT
Citation	Hyung Chul Lee, Hui-Chun Lu, Mark Turmaine, Nidia M. M. Oliveira, Youwen Yang† , Irene De Almeida and Claudio D. Stern. Molecular anatomy of the pre-primitive streak chick embryo Open Biol. null. 10.1098/rsob.190299.
Copyright	Copyright © 2020 The Authors.
Comments	Insufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (XM_015278709.2). DKK1 also known as DKK4 in NCBI.