GEISHA - A Chicken Embryo Gene Expression Database
Browse By
- Anatomical Location
- Stage
- Gene Name
- GEISHA ID
- Multiple Parameters
Search
- Quick Search
Data Class
Enter Text:
go
- Gene Family QuickSearch
Transcription Factors
Growth Factors
Receptors
MicroRNAs
- Human Disease Gene Search
Documents
- Downloads
- Protocols
- About GEISHA
- Contact Us
Resources
- Transgenic Birds
- Model Organism Databases
- Gene Expression Databases
- Genomic Resources
- Anatomical Atlases
- Chicken Stage Series
_

ACKR3
atypical chemokine receptor 3

Gene
Official SymbolACKR3
Official Full Nameatypical chemokine receptor 3
CGNC ID14408
also known asCXCR7, atypical chemokine receptor 3|RDC1-like G protein-coupled receptor|chemokine (C-X-C motif) receptor 7
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001083362
PolypeptideNP_001076831
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.13980
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human
Mouse
Xenopus
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428997
Ensembl Gene
KEGGgga:428997

Entry 1

GEISHA IdCXCR7.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGCTCTCTTTTACTTCCTCCTTGC
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGCAGACACATTGGGTATGACCACCcDNA Template Length1049
Forward cDNA Template Probeshow
ACATAAGCTAGGGTCAATGGAATCGTGCCAGCCAGTGAGGGATGCACGTCAGAGATCACTGCCATACTGCCTTTTATAG
TCATCCTCTTACCAAGGGATAGTTAAAACCAAATGGCAGTCTAACACTCAGACTACAGCACTCTGGATACACTCAACAG
CAATATACATCAAATACATGATAAAAATATATTTCAATTTCAAATACAATTGTATAAGGTACACCAATAGCCAGAAAAT
AAAGTCTTGAGCTTTTAAATACAACACACTATATATATAACATATACAATGAGACAAAAGGGAATCTACACACGGGAGG
AAAAAGCTTATCCTGAAAACACGTGTTATCTATGGTACACAATGGCTTTGTCTGCTAGGAAGTCAGTTCCATTTGCATA
GCATTGTCAAGAAGTCCAGACTGGGCTAGGAGGAGATCAAACAAAACACACAAACAAAACGCTTAGTTTTGGTACCACT
TCCATATTGTGCCTGATTCTACTCTTAAATTACAGTTTGCTATTTCTCTTTTGTAGGCTGTAATTCATGCCCCGTTCAT
AACAAGCATAAGGAAAGGGGGAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
Unlabeled
 
4-6
stage 5
stage 6
Early Mesoderm
Epiblast
Headfold
Neural Plate/Tube
 
7-12
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 8
stage 9
stage 9
stage 9
stage 9
stage 9
stage 10
stage 11
stage 12
Amnion
Anterior Intestinal Portal
Atria
Blood Islands
Ectoderm
Endoderm
Extraembryonic
Forebrain
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Myocardium
Neural Plate/Tube
Pharynx
Primitive Streak
Sinus Venosus
Somites
Ventricles
 
13-18
stage 13
stage 14
stage 14
stage 14
stage 14
stage 14
stage 14
stage 14
stage 15
stage 15
stage 15
stage 15
Amnion
Blood Islands
Dermomyotome
Endocardium
Eye
Face Mesenchyme
Forebrain
Heart
Hindbrain
Lateral Plate Mesoderm
Liver
Midbrain
Myotome
Neural Crest
Neural Plate/Tube
Oral Pharynx
Outflow Tract
Pharynx
Primitive Streak
Sinus Venosus
Somites
Spinal Cord
 
19-24
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
stage 21
Allantois
Anterior/Second Heart Field
Dermomyotome
Endocardium
Eye
Hindgut
Liver
Myotome
Nasal Placode/Nerve
Outflow Tract
Rhombomeres
Spinal Cord
Dorsal Mesocardium
Dorsomedial Lip of Dermamyotome
25-26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
stage 26
Allantois
Anterior/Second Heart Field
Dermomyotome
Endocardium
Eye
Forebrain
Heart
Hindbrain
Hindgut
Leg Mesenchyme
Liver
Midbrain
Myotome
Outflow Tract
Rhombomeres
Spinal Cord
Wing Mesenchyme
 

Entry 2

GEISHA IdCXCR7.Anderson.2020Data SourceGEISHA ISH Analysis
Complete cDNA Template Probeshow
CAGGCGGTGAGGTCACTCGAAACCTGAAGTGAGCAAACATGAGTGCGCTTGATTTGACTTCAATCCTTGATTTTCTGGA
AAAGGCCAACTTAACGGAGATCAACTGGATGTGCAACAACAGCGACTGCATCACAGTAGATGCGACGACATGCCCTGGC
ACGCTCAACAAAAGTGCCCTGCTCTACACCCTGTCCTTCTTCTGCATCTTTATCTTTGTCATAGGGCTGGTGGCCAACT
CTGTTGTGGTGTGGGTCAATCTCCAAGCCAAAATGACTGGCTATGAAACCCATCTCTACATCTTCAATTTGGCTGTCGC
CGATCTGTGTGTTGTCATCACGCTTCCTGTTTGGGTTGTCTCCCTCGTCCAGCATAACCAATGGCACATGGGAGAAATC
ACGTGCAAAATAACTCACCTTATATTTTCGATCAACTTGTACGGCAGCATCTTCTTCCTGGCATGCATGAGCGTGGACC
GCTACCTCTCAGTTGCCTATTTCACTAATTCTAGTAACCGCAAGAAGAAGATCGTCCGCCGCTGCATCTGCATCCTGGT
GTGGCTTCTTGCCTTTTCTGCATCTCTGCCAGACACCTATTTCCTTAAGACAGTCTCTACCAGCAACGAGACCTACTGC
CGCCCCGCGTATCCCGAGGAGAGCTTCAAAGAGTGGTTGATTGGCATGGAGCTCATCTCTGTCGTTTTGGGCTTCCTTA
TCCCTTTTCCAGTCATTGCTCTCTTTTACTTCCTCCTTGCGAAGACCATCTCTGCCTCCA
CommentsImages and probe sequence provided by Claire Anderson; Related paper: Escot et al. Misregulation of SDF1-CXCR4 signaling impairs early cardiac neural crest cell migration leading to conotruncal defects. Circ. Res. 2013
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 11
stage 12
Amnion
Blood Islands
Eye
Forebrain
Hindbrain
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Oral Pharynx
Primitive Streak
Sinus Venosus
Somites
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.13980

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
Home | Contact
     
© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona