Geisha

home

|

contact

A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

Quick Search

Data Class

Enter Text:

Gene Family QuickSearch

	Transcription Factors
	Growth Factors
	Receptors
	MicroRNAs

Human Disease Gene Search

	Downloads
	Protocols
	About GEISHA
	Contact Us

	Transgenic Birds
	Model Organism Databases
	Gene Expression Databases
	Genomic Resources
	Anatomical Atlases
	Chicken Stage Series

AGPAT5
1-acylglycerol-3-phosphate O-acyltransferase 5

Gene

Official Symbol	AGPAT5
Official Full Name	1-acylglycerol-3-phosphate O-acyltransferase 5
CGNC ID	12216
also known as	1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon\|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)\|acid acyltransferase-epsilon
gene type	protein-coding

Genomic Map

	Ensembl ID not known
	NCBI
	UCSC

Sequence Information

Genomic
RNA	XM_419916
Polypeptide	XP_419916

Gene Expression

In Situ Hybridization

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly
Human	55326			MIM:614796
Mouse	52123		All phenotypic alleles (3):Targeted, other(2) Gene trapped(1)	MGI:1196345
Xenopus	548718			977227
Zebrafish	767778	ENSDARG00000063187	ZDB-GENE-060929-914	ZFIN:ZDB-GENE-060929-914

Gene Ontology

Molecular Function
Biological Process
Cellular Component

Links to other databases

Entrez Gene	421898
Ensembl Gene
KEGG	gga:421898

GEISHA Id	AGPAT5.Roy.2013	Data Source	Publication
Complete cDNA Template Probe	show TCTGCCCAAGCGCGGCGGCGATGGGGCCGGCGGGCCCGGCGGGCCGAGTCTGAGTGCGTTGCCCATGTGGGTGTCCCGG TGAGGCCGGGAGCGAGCGGGAAGATGCTGCTGTCGCTGGTGCTGCACACATACTCCATGCGCTACTTCCTGCCCGCCGC CGTCATGATGGGCACGGCGCCCACCTACGTGCTGGCCTGGGGCGCCTGGCGCCTGCTCTCCGCCGTCCTCCCCGCCCGC TTCTACCGGGAGGTGGACGACCGCCTCTACACCATCTACCAGAGCATGGTGCTCTTCTTCTTCGAGAACTACGCGGGCG TGCAGGTAATAATCTATGGGGACTTGCCAAAAAATAAAGAAAATATAATATATTTATCAAATCATCAGTGTACAGTTGA TTGGATCATTGCGGACATGTTGGCAATTAGGCAGAATGCACTTGGGCATGTCCGATATGTTTTGAAAGATGGATTAAAG TGGCTTCCATTGTACGGGTGGTATTTTTCACAGCATGGAGGAGTCTATGTAAAAAGAAGTGCCAAATTCAATGAAAAAG AAATGAGAGCAAAGTTGCGGGCCCAGATGAAAGCTGAGACTCCGATGTATTTAGTGATTTTTCCAGAGGGGACTCGTTA CAATCCAGAGATACCAAAAGTCATTGCAGACAGTCAATCATTTGCTGAAAAAGAAGGACTTGCTGTATTGAAGCATGTG CTAACGCCACGTGTGAAGGCAACTCACGTAGCAATCGACACAATGAAAGACTATCTGGATGCAGTGTATGATGTGACTG TGGCATATGAAGGTACTGTGGACCACAAAGGACAAAGAAAACTGGCACCATCTATGACAGAGTTTCTTTGCAAGGAATG CCCAAGAGTTCATATTTTCATTGATCGAATTGAACTGAAGGACATTCCAGAAGAGCAGATGTATATGAGAAGGTGGCTT CATGAACGATTTGAAATAAAGGATAAGTTACTAATAGAGTTTTATGATGCAAAGGATTCTAAAAGAAGAAACAAGTTCC CGGGAAAAAGTGTTCATTCCAAATTAAGCCTCAAGAAAACTTTGCCATCTTTGCTGTTTCTAGGTGGCCTGACTGCTAG TATGCTTCTGACAGAATCTGGAAGGAAACTTTATGTAAAAACGTGGATATACGGGACTTTAATTGGCTGCCTGTGGGTT AGCATTAAACCATAAGCAGATGTTAGTCTCCGGTCAGTGGGATGTGCTGTCTTTTCTTGCACATTGCACCAAACTTTTT CCCGAATTTATAGTAAAAACGTGTAAATAAAGCCTTATCGACTGAACATTGGAAATAATAGAATTTGTGACCTAAGCCT CTGTGTGGTCGGTCTGGGGAAAATAAATGTAGTTTTTCAAATTTGCTACTCATTTTTGCTGGAATAACGGCGGATAAAC GGAGTCGTCTGATAAATGGCTTTCCCCATGAGCTAACACCCATCTCTGTCTGCAGATGAAGTATGAGCTATGCGTCAGG GTGTCTTAAGTGGACCTGTGAATGTATTTACAGAGATTAATTTAGGTTATATATTTATTCTTCTGATACTCACGTTGAA TTTTCGTTACTCCTTGGTGCGTTGCAGCAGCCCAGTTGCATCTGCCCCAGCTGTATGGCAAGTAAAATCAAAAGCTTTT TTTCTCTGGCATTTTGCTTTTCAGTTGTAACTGAATACCGTGTTCTCAGAAAGGGCCTGGAAAGCTGGCAAATCATGAG ACGCTCCCTAAAGCAGAGTAAAACGTTCATGGGGAAGGAGCTCTGTTTATCTAGTGCATGATCTTTGATTCTATCTCAG TATTAGCCGATTATTTTACATGTGCAAAACATTAAACCTTACTGAGCAAACGGCTTATTTTGCGCACCCCGTATTTGTG CATAAGAGGAATGCGTGCAGTATAATGACGTGGGTTTTTATGTTGCGGCCTAACCTGGCTGTAGCCTTCCTTGTGTCTG CGTTGCCCATAGCGCGTCAGGCCTTCCAGCTGGGCTCACCGACCCACCATGTCCACGTGCCATAAGCAGCAGTGAGCGC TCACAGCTCCCTGTACCTCACCGGCGTTGGGTGTGAGCTGTGCCCTCTGGGTAACACGCAGACCCAGGGTAGCTTCAGG AGCGTGGGTTACAGTAGCAAGCAACCTTCAGGTGTCCCTGTGAACCACGAAGCACGTGCCTTTTCCCAATAGTCTGACT TAGGCTGATGTCTCATAAGCTGGCACCCATCTCAGTGTTGTAGTGTTACATTAGATTTCCAAGGCATCCCAGGCGATGC GGATTTCAGGGGGACTGAAGTTACAGGGTTGACGTATACAACTTGCACAGCAGTCTAGGAGTGAAAGAAATGTGCGTCC TCTCACCTGCCTGAAAATATACTTCTAAAAGCAGAATCACCAAACCCTCTCTACCAGAAAGCCTGCGATTGCCATGGCT GGGATTTTTGTTGGGGAAATGCCATTTCCTGATATCAAGGGAATTGTCCATATGTACAGCAACGGGGTAGGAAAGAGGA TGTATTTTAGCTTCTTCCGCTAAGGAATCAGACTCCCTGTGTGAAAATGAAAGAACCAGAGAATATTTTTGTATGACAC TTGCAAGCTTTAAATGTGCACCTCTTTCGCTTCGGTATGATTTGTCTTGCATTAAAACCCACCGTGAATTAAAATCTCT CTCTTAAGATTATAACTCCATTTTTCAGATTCCACTGTTGCCACTTAATTGGAGATACTGCTTCTACTGTCGATTTTGT TTCTCGTTGGCTCTTTGTTTGTTTGTTTGATAGAACGATGACAGTTCCACCTTAAAATCATTGGGTACAGCTTTCAGGT TGCAGCTCTGCGTCCTTCCATAATGGGTTTTGTCACTGGAGTTATTTATATCGGTGATTGATTCAGGATATGTTGATGA ACCGTGTGAAAAACAATGACTGGGAACAATGTTGAAAAACAGTATTGTTATGAGGCTGTGAAACCAGAAGGAAAAAAAA AAAAGCCATTTTATGTAACAGCCAAATGTGCTCACGTGTAGCTCTTCCTATGCTCCGCTGACCATTGCCAGTGAGTGTA ACCTGAAGGCAGCGTTATCAGGTTAGTTTGATTTTGAATCATGGAATGAAATTGTACTGTCATGATTACATTTCTTTGT AGCAGCTAAGAATAACATTTAATTGCACATCAGAAATATACGCAGACAGCTTAACTCATTTGTAGAAAAATAAATGCTG TTTTGGAGAGCCTAATTACCACAAAATACTGGACCTCTCTTACTGTTTACTTGTCAGGAATATAATTGACACAGTGCAA CAAGCAGGATGTTTATTTTGAATGTTACTTTCTATGTTACTCTTAGTTGGTTTTTTTTTCCTTGCAATTAATTTATGAA GTTTTGAAACTGTAATTTGCTGATGCATTTGGCACTGGGAGTATCACATGCTATTTCTAAATATGCACTGATATTAACT TGAAATATTTCTTCATTAAAATAAGAAGAGCTGATGCTCATTCAA
Citation	Roy P, Kumar B, Shende A, Singh A, Meena A, Ghosal R, Ranganathan M, Bandyopadhyay A. A Genome-Wide Screen Indicates Correlation between Differentiation and Expression of Metabolism Related Genes. PLoS One. 2013 May 22;8(5):e63670
Copyright	This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Comments	As insufficient information is provided in publication to verify exact sequence used to synthesize probe, the sequence below was obtained from NCBI XM_419916.4

Stage

Image (click image to view full size)

Location (click to highlight)

Comments (click to highlight)

19-22

stage 22

stage 22

Leg
Leg Mesenchyme

Mouse

Emage	MGI:1196345
MGI GXD	MGI:1196345

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN	ZDB-GENE-060929-914

Home

|

Contact

University of Arizona

NICHD

National Institute of Health

Hy-Line

© 2008 Arizona Board of Regents
This website is hosted by the Biotechnology Computing Facility at the University of Arizona