GEISHA - A Chicken Embryo Gene Expression Database
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POU6F2
POU class 6 homeobox 2

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolPOU6F2
Official Full NamePOU class 6 homeobox 2
CGNC ID9347
also known asPOU domain, class 6, transcription factor 2, POU domain, class 6, Retina-derived POU domain factor 1 (RPF-1), RPF-1
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNAXM_418861
PolypeptideXP_418861
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.11216
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly35813FBgn0261588
Human11281ENSG00000106536MIM:601583MIM:609062
Mouse218030ENSMUSG00000009734All phenotypic alleles (1):Targeted, knock-out(1) MGI:2443631
Xenopus100489745853681
Zebrafish100001518ENSDARG00000086362ZDB-GENE-091118-71ZFIN:ZDB-GENE-091118-71
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene420763
Ensembl Gene
KEGGgga:420763
GEISHA IdChEST593b14Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
AGCTGGACAAGTCAGTAAGCCCTTGCTGTCACTGCGGAGTGAAATGAATGCAGAGTTGAGAGGTGAGGACAAGGCAGCT
ACTTCAGACAACGAGCTGAATGAGCCCCTGCTTGCGCCTGTGGAATCAAATGACAGCGAGGACACTCCCAGCAAGCTCT
TCGAGGCCAGAGGAAACACAGTGCTGTCTGATACAAGCCCAGGTGACCAGCACCAACCCAGTCAGTCCCATCCTGCATT
CCCTGTTGGGCCTCAGCCATTACTGACAGCCCAACAGTTAGCCTCAGCGGTAGCAGGGGTGATGCCAGGAGGCACTCCG
GCCCTGAATCAACCGATTCTTATTCCTTTCAACATGGCTGGGCAGCTGGGAGGCCAACAAGGATTGGTCCTAACTCTAC
CTACAGCAAATCTCACCAACATCCAAGGACTGGTAGCAGCAGCTGCAGCAGGAGGCATTATGACTTTGCCATTGCAAAA
TCTACAAGCTACCTCATCCCTGAACTCTCAGCTTCAACAGCTTCAGCATCTTCAGCAGCTCCAGCACCAACAGCAGCAG
CAGCAGCAGCAAGGGCAGCAGCAGCAGCAGCAAAGCCAGCAGCAGCAGCAGCAAACTCAGCAGACACAGACTCCACAGC
CATCCCAGGCCTTTGGCAATGCCCTCTCCAGTCTTCAGGGGGTCACAGGTCAACTCGTCACTAATGCACAAGGACAGAT
TTATGGAACAATCCCCCTGATGCCTAATCCAGTCCCCTCCAGCCAGGCAGCAAGTGGAGCTCAGGGCCTTCAGGTGCAG
CCAATAACTCACAGTTATTGACCCATGCCCAGGGTCAGATCATCGCTACCGTCATCGGCAAACAAATACTCCCC
CommentsNo specific expression detected stages 8-24.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 6
Extraembryonic Mesoderm
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
 
7-12
stage 7
stage 8
Extraembryonic Mesoderm
Headfold
Lateral Plate Mesoderm
Neural Plate/Tube
Paraxial Mesoderm
Primitive Streak
Somites
faint
13-18
stage 14
stage 14
stage 14
stage 14
stage 16
Ear/Otic Placode
Ectoderm
Eye
Forebrain
Foregut
Heart
Hindbrain
Midbrain
Myotome
Neural Plate/Tube
Notochord
Pharyngeal Arches and Clefts
Pharynx
Sclerotome
Somites
Spinal Cord
Widespread Expression
 
19-24
stage 21
stage 21
stage 22
stage 22
stage 24
stage 24
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Leg AER
Leg Mesenchyme
Midbrain
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Spinal Cord
Widespread Expression
Wing Mesenchyme
 
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.11216

Mouse

EmageMGI:2443631
EurexpressMGI:2443631
MGI GXDMGI:2443631

Frog

Xenbase853681

Fruit Fly

BDGPFBgn0261588

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-091118-71
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