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A chicken embryo gene expression database

	Anatomical Location
	Stage
	Gene Name
	GEISHA ID
	Multiple Parameters

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CELF2
CUGBP Elav-like family member 2

Gene

Official Symbol	CELF2
Official Full Name	CUGBP Elav-like family member 2
CGNC ID	49047
also known as	CUGBP2, CUGBP Elav-like family member 2\|CELF-2\|CUG triplet repeat, RNA binding protein 2\|CUG-BP- and ETR-3-like factor 2\|CUG-BP2\|ELAV-type RNA-binding protein 3\|ETR-3\|RNA-binding protein BRUNOL-3\|bruno-like protein 3, ELAV-type RNA-binding protein 3 variant L mRNA
gene type	protein-coding

Genomic Map

	Ensembl
	NCBI
	UCSC
	Gallus-Browse

Sequence Information

Genomic
RNA	NM_204260
Polypeptide	NP_989591
Sequence Clusters/ESTs	Unigene

Gene Expression

In Situ Hybridization	GEISHA
EST Profile	Gga.4919

Orthology

	Entrez Gene	Ensembl Gene	Genetic Phenotypes	MOD
Fruit Fly	34648			FBgn0000114
Human	10659	ENSG00000048740		MIM:602538
Mouse	14007	ENSMUSG00000002107	All phenotypic alleles (1):Targeted, other(1)	MGI:1338822
Xenopus	100125022, 379280, 100190783			963639
Zebrafish	373117	ENSDARG00000002131	ZDB-GENE-030826-35	ZFIN:ZDB-GENE-030826-35

Gene Ontology

Molecular Function	nucleotide binding, RNA binding
Biological Process	mRNA processing
Cellular Component	cytoplasm, nucleus

Links to other databases

Entrez Gene	374111
Ensembl Gene	ENSGALG00000006713
KEGG	gga:374111

Entry 1

GEISHA Id	CELF2.UApcr	Data Source	GEISHA ISH Analysis
Forward cDNA Template Primer	ACCCTCCCCAAAGTAAAGGTTG
Reverse cDNA Template Primer	AATTAACCCTCACTAAAGGCATTCGTCAAGCCTGTTGCG	cDNA Template Length	903
Complete cDNA Template Probe	show ACCCTCCCCAAAGTAAAGGTTGTTGTTTCGTAACATTTTATACAAGAAAAGCTGCTCTTGAGGCACAGAATGCACTGCA CAATATTAAAACTTTACCTGGGATGCATCATCCTATTCAGATGAAACCCGCAGATAGTGAAAAGTCCAATGCTGTGGAA GACAGAAAATTGTTCATAGGAATGGTTTCGAAGAAGTGTAATGAGAATGATATCAGGGTGATGTTTTCTCCGTTCGGCC AGATAGAAGAATGCCGAATCCTTCGGGGACCTGATGGGCTGAGCAGAGGCTGTGCGTTTGTCACATTTTCTACAAGGGC AATGGCACAGAATGCAATCAAAGCCATGCACCAGTCTCAGACCATGGAGGGCTGCTCTTCGCCAATCGTGGTGAAGTTT GCTGATACCCAAAAGGACAAAGAGCAGCGGCGTTTGCAGCAGCAGTTGGCACAGCAGATGCAACAGCTCAATACTGCCA CTTGGGGAAACCTCACGGGTCTTGGAGGACTCACACCACAATATCTAGCTCTCCTGCAGCAAGCAACTTCCTCCAGTAA CTTGGGTGCCTTCAGCGGCATTCAGCAAATGGCCGGCATGAACGCTTTACAATTACAGAATTTGGCAACTTTAGCAGCT GCAGCAGCCGCCGCCCAAACCTCAGCTACTACCACCAATGCAAATCCTCTCTCCACAACGACTGGTGCTCTGGGAGCCC TCACAAGTCCCGTGGCTGCATCAACTGCTAATTCCACAGCTGGTGCAGCCATGAATTCTTTGACTTCTTTGGGTACTCT CCAAGGACTGGCTGGAGCCACCGTTGGACTGAATAATATTAATGCACTAGCAGGTACCGTAAACAGTATGGCGGCCCTG AACGGAGGACTCGGCGCAACAGGCTTGACGAATG

Stage

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Location (click to highlight)

Comments (click to highlight)

7-12

stage 8

stage 10

stage 12

Blood Islands
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Intermediate Mesoderm
Lateral Plate Mesoderm
Midbrain
Neural Plate/Tube
Notochord
Outflow Tract
Primitive Streak
Sinus Venosus
Somites
Splanchnic Mesoderm
Ventricles
extraembryonic ectoderm
extraembryonic endoderm
extraembryonic mesoderm

19-24

stage 19

stage 22

stage 23

Allantois
Aorta
Ear/Otic Placode
Eye
Forebrain
Foregut
Head Mesenchyme
Hindbrain
Lateral Plate Mesoderm
Leg Mesenchyme
Liver
Lung
Mesonephros
Midbrain
Myotome
Nasal Placode/Nerve
Neural Plate/Tube
Outflow Tract
Pharyngeal Arches and Clefts
Sclerotome
Sinus Venosus
Somatic Mesoderm
Spinal Ganglia and Nerves
Splanchnic Mesoderm
Ventricles
Wing Mesenchyme

25-27

stage 27

Foregut
Head Mesenchyme
Leg Mesenchyme
Liver
Myotome
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Spinal Ganglia and Nerves
Ventricles
Wing Mesenchyme

Entry 2

GEISHA Id	ETR-3.Brimacombe.2007	Data Source	Publication
Complete cDNA Template Probe	show ATGAACGGAGCTTTGGATCATTCAGACCAACCAGACCCAGATGCCATTAAGACGTTTGTTGGACAGATTCCCCGTTCAT GGTCGGAAAAAGAGTTAAAAGAACTTTTTGAGCCTTACGGAGCTGTCTACCAGATTAATGTTCTTCGAGACAGAAGTCA GAACCCTCCCCAAAGTAAAGGTTGTTGTTTCGTAACATTTTATACAAGAAAAGCTGCTCTTGAGGCACAGAATGCACTG CACAATATTAAAACTTTACCTGGGATGCATCATCCTATTCAGATGAAACCCGCAGATAGTGAAAAGTCCAATGCTGTGG AAGACAGAAAATTGTTCATAGGAATGGTTTCGAAGAAGTGTAATGAGAATGATATCAGGGTGATGTTTTCTCCGTTCGG CCAGATAGAAGAATGCCGAATCCTTCGGGGACCTGATGGGCTGAGCAGAGGCTGTGCGTTTGTCACATTTTCTACAAGG GCAATGGCACAGAATGCAATCAAAGCCATGCACCAGTCTCAGACCATGGAGGGCTGCTCTTCGCCAATCGTGGTGAAGT TTGCTGATACCCAAAAGGACAAAGAGCAGCGGCGTTTGCAGCAGCAGTTGGCACAGCAGATGCAACAGCTCAATACTGC CACTTGGGGAAACCTCACGGGTCTTGGAGGACTCACACCACAATATCTAGCTCTCCTGCAGCAAGCAACTTCCTCCAGT AACTTGGGTGCCTTCAGCGGCATTCAGCAAATGGCCGGCATGAACGCTTTACAATTACAGAATTTGGCAACTTTAGCAG CTGCAGCAGCCGCCGCCCAAACCTCAGCTACTACCACCAATGCAAATCCTCTCTCCACAACGACTGGTGCTCTGGGAGC CCTCACAAGTCCCGTGGCTGCATCAACTGCTAATTCCACAGCTGGTGCAGCCATGAATTCTTTGACTTCTTTGGGTACT CTCCAAGGACTGGCTGGAGCCACCGTTGGACTGAATAATATTAATGCACTAGCAGGTATGGCGGCCCTGAACGGAGGAC TCGGCGCAACAGGCTTGACGAATGGTACGGCCGGCACAATGGACGCGCTCACCCAGGCCTACTCAGGAATCCAGCAGTA TGCTGCCGCTGCGTTGCCCACCTTGTACAGCCAGAGCTTGTTGCAGCAGCAAAGTGCCGCGGGCAGCCAGAAGGAAGGT CCAGAAGGGGCAAACCTCTTTATTTACCACCTCCCCCAGGAATTTGGAGACCAGGACATTCTGCAGATGTTCATGCCTT TTGGAAATGTTATCTCTGCTAAAGTCTTCATTGACAAACAGACCAATCTGAGCAAGTGCTTTGGTTTTGTTAGCTATGA CAATCCAGTCTCTGCACAAGCTGCTATCCAGGCTATGAACGGCTTTCAGATTGGCATGAAACGCTTGAAGGTTCAGCTG AAACGCTCCAAAAATGACAGCAAACCTTACTGA
Citation	Brimacombe KR, Ladd AN. Cloning and embryonic expression patterns of the chicken CELF family. Dev Dyn. 2007 Aug;236(8):2216-24.
Copyright	Copyright © 2007 Wiley-Liss, Inc.