GEISHA - A Chicken Embryo Gene Expression Database
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PDGFB
platelet-derived growth factor beta polypeptide

Gene
Official SymbolPDGFB
Official Full Nameplatelet-derived growth factor beta polypeptide
CGNC ID9243
also known asplatelet-derived growth factor subunit B|platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204270
PolypeptideNP_989601
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.71
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human5155ENSG00000100311MIM:190040MIM:190040
Mouse18591ENSMUSG00000000489All phenotypic alleles (6):Targeted, knock-out(3) Targeted, other(3) MGI:97528
Xenopus100492827, 493575487582
Zebrafish796490, 798657, 565324ENSDARG00000038139, ENSDARG00000040839ZDB-GENE-081031-37, ZDB-GENE-050208-525ZFIN:ZDB-GENE-081031-37, ZFIN:ZDB-GENE-050208-525
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene374128
Ensembl GeneENSGALG00000012178
KEGGgga:374128

Entry 1

GEISHA IdPDGFB.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATAACTCAGCCCAGCCAAAACC
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGTCCCCTGCCAGCACTTCTATGCcDNA Template Length554
Forward cDNA Template Probeshow
NGGGATTTTTNNCCCCTTTCNNCCNNAAGGTGTCCCGATCTCGAGAGAGGCGAAGCCTTGATGCTCTGGCAGCAGCATA
GCCAGCTGCTCCTCGCCGAGTGCAAGACACGGACGGTGGTCTTTGAGATCTCCCGTGACATGGTGGACAGCACCAATGC
CAACTTCGTGGTGTGGCCACCCTGCGTGGAGGTGCAGCGGTGCTCCGGCTGCTGCAACAACCGCAACGTGCAGTGCCGC
CCCATGCAGATTCGCGTCCGGAATGTCCAGGTGAACAAGATCGAGTTTTTCCAGAGGAAGCCAATATTCAAAAAAGTCA
TCGTGCCTTTGGAGGACCACGTGCAGTGCCGGTGCGAAGCGGTGTCCCGGCCGCCACCCAGGAGCATCCGACCGGCATC
CCGTGAGCAGAGACGCTTCTCGCCGTCATTCACCACAGCCGCCATCTCACAGAGGAAGCGGGTACGCCGGCCGCCAGCA
CAGAAGAGAAAACACTGGAAATACAAGCATGTCAACGATAAGAAAGTGCTGAAAGAAATCCTCATAGCATAGAAGTGCT
GGCAGGGGACCTTTATTGAGGGTTAATTTCTANAGCAAAAA
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 12
Blood Vessels
 
13
stage 13
Blood Vessels
 

Entry 2

GEISHA IdPDGFB.Yang.2008Data SourcePublication
Complete cDNA Template Probeshow
TTTATGCTCGAGGCAGCCGGCAAGGCTTGAACCCGGCATGAATTTCGGCGTGGTCTTCGCCGTCATCCTCTCCCTGCCC
CTGGCCCGCCTGGAGGGGGACCCCATACCCGAAGATATTTATGAGATTTTGGGTGGCAGCTCCGTGCGCTCCATCAGTG
ACCTCCAGCGTGCCCTGCGGATAGACTCCAGGAGGACAGCTCTAGCCTGGACCTGAATGCAACTCAGCCCAGCCAAAAC
CATGTGTCCCTGTCTCGAGAGAGGCGAAGCCTTGATGCTCTGGCAGCAGCAGAGCCAGCTGTCCTCGCCGAGTGCAAGA
CACGGACGGTGGTCTTTGAGATCTCCCGTGACATGGTGGACAGCACCAATGCCAACTTCGTGGTGTGGCCACCCTGCGT
GGAGGTGCAGCGGTGCTCCGGCTGCTGCAACAACCGCAACGTGCAGTGCCGCCCCATGCAGATTCGCGTCCGGCATGTC
CAGGTGAACAAGATCGAGTTTTTCCAGAGGAAGCAATATTCAAAAAAGTCATCGTGCCTTGGAGGACCACGTGCAGTGC
CGGTGCGAAGCGGTGTCCCGGCCGCCACCCAGGAGCATCCGACCGGCATCCCGTGAGCAGAGACGCTTCTCGCCGTCAT
TCACCACAGCCGCCATCTCCCAGAGGAAGCGGGTACGCCGGCCGCCAGCACAGAAGAGAAAACACAAGAAATACAAGCA
TGTCAACGATAAGAAAGTGCTGAAAGAAATCCTCATAGCATAGAAAGTGCTGGCAGGGGAGAGAGAGCACAAGGTTTAT
TTTAACTATATTTGCTGTATTGCCCCCATGGGGGTCCTTGGAGTGATAACTTTTCCTCTTTTGGCCGGTCTGGCTCAAC
GACTGATTCCAGGCGGCCAATGGTGCTTCCCTTTCCATCAGTGGGACCTTCTCTAACCGAAGGCTCTCCTTCTTTCATT
TTTACCTCTTAAAGTTTTCCAAAACAAAAACCCCAA
CitationYang X, Chrisman H, Weijer CJ. PDGF signalling controls the migration of mesoderm cells during chick gastrulation by regulating N-cadherin expression. Development. 2008 Nov;135(21):3521-30. Epub 2008 Oct 2.
Copyright© 2008
CommentsThe cDNA template used to generate the probe was obtained from EST - ChEST115n16 as described in Yang et al.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
1-3
stage 3
stage 3
Primitive Streak
Expression of Pdgfb is almost undetectable in HH3-8 embryos.
7
stage 7
Primitive Streak
Expression of Pdgfb is almost undetectable in HH3-8 embryos.
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.71

Mouse

EmageMGI:97528
EurexpressMGI:97528
MGI GXDMGI:97528

Frog

Xenbase487582

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-081031-37, ZDB-GENE-050208-525
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