GEISHA - A Chicken Embryo Gene Expression Database
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SDC1
syndecan 1

Gene
Official SymbolSDC1
Official Full Namesyndecan 1
CGNC ID12340
also known assyndecan-1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_419972
PolypeptideXP_419972
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.8563
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human6382ENSG00000115884MIM:186355
Mouse20969ENSMUSG00000020592All phenotypic alleles (3):Targeted, knock-out(1) Targeted, other(2) MGI:1349162
Xenopus100038138, 398348494959
Zebrafish
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene421960
Ensembl GeneENSGALG00000016480
KEGGgga:421960
GEISHA IdSDC1.Cui.2019Data SourcePublication
Complete cDNA Template Probeshow
GTCCCGCAAACTACAAATCTGAACCTTCCTCCTGAAGATCTCGATTCTTCTGGTGATGATGATGATGGATTCTCAGGTT
CAGGTGCAGGTCCCCTGCCTGATCAGTCTCTCACCTGGAGAATGCCAGCAGAGCCGACCAATTCCTCGTTACTGGCAAC
AGCAGTGGTTTTCAATGAACAGCTGTTTCCTAGGATTGAGAGCCGAACTGAAAAGAAAGTAACAACTCCACCTGCAACT
AGTCGTGTAGTGACAGAGGAGCCAGTTGTAGCTGTGAAGGATGAAACACCCTTGTTGGGCTCACCTGATGAGAAACCAA
CAGACGATGCAGTTGTAACAACAGCAAGAAGTCCCACTACTCACTTCCCTTCGGTGCTTCATGTAGTTCCTTCAGAAGC
CTCAGGCACAGTCCATGAGCTCGAACCTAAAACCCCTGGCTCTGAGATGCCAGACACTAAAGGTGTGCCTGAGACCAAC
TCCACCACCCATCCGGAGGGGGACATCGCTGCTGCTCCCACGACAGCTCCAGGCGACGTAGCTCCTACACATGAGGAGG
TTTCTGAAGATGGCTCAGGAGACCCGGGAGACTTCATCTTGGTTAAAGATGAGGATTTGGTCCCTACCCAGAACTCTGA
AGTGCCGGCTGACTCTGGGAGGAATGCCAAAGCAGCGGGAGCCTCGGGAATTATGGACAGAAAAGAAGTTCTTGGAGGT
GTTATTGCTGGAGGACTGGTAGGCTTGGTGTTTGCAGTGTTTCTAGTTGCATTTATGCTGTACAGAATGAAGAAAAAAG
ACGAAGGAAGCTATTCACTGGATGAAC
CitationCui R, Lwigale P. Expression of the heparin-binding growth factors Midkine and pleiotrophin during ocular development. Gene Expr Patterns. 2019 Jun;32:28-37. Epub 2019 Feb 27. DOI: 10.1016/j.gep.2019.02.001.
CopyrightCopyright © 2019 Elsevier B.V. 
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Cui et al. 2019.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
31
stage 31
stage 31
Eye
Retina
cornea
all
 
  
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.8563

Mouse

EmageMGI:1349162
EurexpressMGI:1349162
MGI GXDMGI:1349162

Frog

Xenbase494959

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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