GEISHA - A Chicken Embryo Gene Expression Database
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PAPLN
papilin, proteoglycan like sulfated glycoprotein

Gene
Official SymbolPAPLN
Official Full Namepapilin, proteoglycan like sulfated glycoprotein
CGNC ID53499
also known aspapilin
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
Sequence Information
Genomic
RNAXM_426430
PolypeptideXP_426430
Gene Expression
In Situ HybridizationGEISHA
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly43872FBgn0003137
Human89932ENSG00000100767
Mouse170721ENSMUSG00000021223All phenotypic alleles (4):Targeted, knock-out(2) Targeted, other(2) MGI:2386139
Xenopus100489537855686
Zebrafish562930, 553586ENSDARG00000027867, ENSDARG00000042186ZDB-GENE-030131-6023, ZDB-GENE-070815-4ZFIN:ZDB-GENE-030131-6023, ZFIN:ZDB-GENE-070815-4
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene428873
Ensembl Gene
KEGGgga:428873
GEISHA IdPAPLN.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTGAAGGGGAAGGATGTCTCAATAG
Reverse cDNA Template PrimerATTAACCCTCACTAAAGGTAACTGAATCTGCCGCCGACcDNA Template Length946
Forward cDNA Template Probeshow
TTCCTTCATCAGAAATGAGGCATGTGTAAGTCCCAGCCATCCTCCAGCTTGACGTGGCTGATAACTAAAGAGCTGTCAG
ACTGGTAGGTGTGCCTGTCAGAGGAGACTGGCCGGCCATCCTTCATCCACTCCACCCTGGAGAAGGGGGACAGACTTGC
CTTGCAGACCAGTTGGATGTTTTGTCCCATGATTGCTGTCACAAGAGAGGGCTTGGCTTCCTCCAGAATGGCTCTGTGC
AGATTCTGTGCTGGAAAGGAGTCTGCAGACACCTGGTGCCCAAAGCCTTCAATCATGGAAGCATCTGTTCCAGAAGCCT
TATGCCACTGCTTGCCTTCACGTGGCAGCACCTGCTGGCCACTGCTACTCAGCTTCTGGGAGGGCCCAGGCACTGCTGT
TTCCCCTGTCAAGTGCAGCTGGCTCAGGCTTTTCAATCTACTTTGCTGGGTGCCCCATTGCTGGCTTTCCATCACACTA
GACCTTTGCAAAGTCTCTGGCAGCACCTGCCTTCTCCAGTAGTTCTCCCCATGTCTGTTTTGTGTGCGGTGTGAAGCCC
CATAGGCTCTTCCTTCTTGACCGTGACTTGAAGACTCTCCTGGAAGGGGCTGCTGCTTACCCTGAGCAGTATCCATATG
AAAGCGAGAGCCAGTGTCCTGCTGTTGCAGAGTTCTTGTGCCAGAAGAGGGCTGGTGCTCCAAAGGACTAATCCCCACA
GAGCTATGACACACTCTCATGCATTCCTCCTCTGAGGCAAAGCTGTTTTTATTGCCATGGCAGCCACCATACCAAAACC
GATTGCACTTTCCAACAACAGTCACAAAGTACCAGCGAGTGGTCCAGTTTGCACAGGGGCCGTGAGCACTGGGGCAGCA
GGCACATGACAGGATATGGGTAGTTGGGCCTATTGAGAATCTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 8
Unlabeled
 
13-18
stage 13
stage 16
Head Mesenchyme
Somites
Unlabeled
 
19-24
stage 19
stage 22
stage 22
stage 22
stage 22
stage 23
Cranial Ganglia
Diencephalon
Ectoderm
Forebrain
Foregut
Leg Mesenchyme
Lung
Neural Plate/Tube
Pharyngeal Arches and Clefts
Sclerotome
Somatic Mesoderm
Stomach
Unlabeled
Wing Ectoderm
Wing Mesenchyme
trigeminal ganglion
25-27
stage 27
stage 27
stage 27
stage 27
Cranial Ganglia
Foregut
Leg Ectoderm
Leg Mesenchyme
Liver
Lung
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Sclerotome
Spinal Ganglia and Nerves
Wing Ectoderm
Wing Mesenchyme
 

Mouse

Emage
MGI GXDMGI:2386139

Frog

Xenbase855686

Fruit Fly

BDGPFBgn0003137

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-030131-6023, ZDB-GENE-070815-4
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